RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 CST3P01034 146 aaPredicted RBP17.18■□□□□ 0.34
SSBP1-214ENST00000498107 FAM163BP0C2L3 166 aa17.18■□□□□ 0.34
SSBP1-214ENST00000498107 P4HA1P13674 534 aa17.18■□□□□ 0.34
SSBP1-214ENST00000498107 PIK3CAP42336 1068 aa17.18■□□□□ 0.34
SSBP1-214ENST00000498107 PPP3CAQ08209 521 aa17.18■□□□□ 0.34
SSBP1-214ENST00000498107 HYAL1Q12794 435 aa17.18■□□□□ 0.34
SSBP1-214ENST00000498107 MRPL58Q14197 206 aaKnown RBP17.18■□□□□ 0.34
SSBP1-214ENST00000498107 ZNF699Q32M78 642 aa17.18■□□□□ 0.34
SSBP1-214ENST00000498107 CTXN3Q4LDR2 81 aa17.18■□□□□ 0.34
SSBP1-214ENST00000498107 OVOS1Q6IE37 1185 aa17.18■□□□□ 0.34
SSBP1-214ENST00000498107 PRSS55Q6UWB4 352 aaPredicted RBP17.18■□□□□ 0.34
SSBP1-214ENST00000498107 C15orf39Q6ZRI6 1047 aa17.18■□□□□ 0.34
SSBP1-214ENST00000498107 THEM5Q8N1Q8 247 aa17.18■□□□□ 0.34
SSBP1-214ENST00000498107 TOP6BLQ8N6T0 577 aa17.18■□□□□ 0.34
SSBP1-214ENST00000498107 SLC35C1Q96A29 364 aa17.18■□□□□ 0.34
SSBP1-214ENST00000498107 PABPC5Q96DU9 382 aaKnown RBP17.18■□□□□ 0.34
SSBP1-214ENST00000498107 FAM84AQ96KN4 292 aa17.18■□□□□ 0.34
SSBP1-214ENST00000498107 MMRN2Q9H8L6 949 aa17.18■□□□□ 0.34
SSBP1-214ENST00000498107 VRTNQ9H8Y1 702 aa17.18■□□□□ 0.34
SSBP1-214ENST00000498107 COG5Q9UP83 839 aa17.18■□□□□ 0.34
SSBP1-214ENST00000498107 SNX9Q9Y5X1 595 aa17.18■□□□□ 0.34
SSBP1-214ENST00000498107 OR6C75A6NL08 312 aa17.17■□□□□ 0.34
SSBP1-214ENST00000498107 PRKCSHP14314 528 aaPredicted RBP17.17■□□□□ 0.34
SSBP1-214ENST00000498107 MYL6P60660 151 aa17.17■□□□□ 0.34
SSBP1-214ENST00000498107 TNNC1P63316 161 aa17.17■□□□□ 0.34
SSBP1-214ENST00000498107 WDR72Q3MJ13 1102 aa17.17■□□□□ 0.34
SSBP1-214ENST00000498107 ZNF667Q5HYK9 610 aa17.17■□□□□ 0.34
SSBP1-214ENST00000498107 CREBRFQ8IUR6 639 aa17.17■□□□□ 0.34
SSBP1-214ENST00000498107 TRIM59Q8IWR1 403 aa17.17■□□□□ 0.34
SSBP1-214ENST00000498107 FBXL13Q8NEE6 735 aa17.17■□□□□ 0.34
SSBP1-214ENST00000498107 CASP10Q92851 521 aa17.17■□□□□ 0.34
SSBP1-214ENST00000498107 CNOT6LQ96LI5 555 aaKnown RBP17.17■□□□□ 0.34
SSBP1-214ENST00000498107 MED15Q96RN5 788 aa17.17■□□□□ 0.34
SSBP1-214ENST00000498107 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.17■□□□□ 0.34
SSBP1-214ENST00000498107 SYCE3A1L190 88 aa17.16■□□□□ 0.34
SSBP1-214ENST00000498107 PMM2O15305 246 aa17.16■□□□□ 0.34
SSBP1-214ENST00000498107 P4HA2O15460 535 aa17.16■□□□□ 0.34
SSBP1-214ENST00000498107 VNN1O95497 513 aa17.16■□□□□ 0.34
SSBP1-214ENST00000498107 CAVIN2O95810 425 aa17.16■□□□□ 0.34
SSBP1-214ENST00000498107 GLUD1P00367 558 aa17.16■□□□□ 0.34
SSBP1-214ENST00000498107 HLA-DRAP01903 254 aa17.16■□□□□ 0.34
SSBP1-214ENST00000498107 LHX1P48742 406 aa17.16■□□□□ 0.34
SSBP1-214ENST00000498107 ADAM15Q13444 863 aa17.16■□□□□ 0.34
SSBP1-214ENST00000498107 COL19A1Q14993 1142 aa17.16■□□□□ 0.34
SSBP1-214ENST00000498107 SLC8B1Q6J4K2 584 aa17.16■□□□□ 0.34
SSBP1-214ENST00000498107 TMEM184AQ6ZMB5 413 aa17.16■□□□□ 0.34
SSBP1-214ENST00000498107 HDAC7Q8WUI4 952 aa17.16■□□□□ 0.34
SSBP1-214ENST00000498107 HLA-CQ95604 372 aa17.16■□□□□ 0.34
SSBP1-214ENST00000498107 MMS19Q96T76 1030 aa17.16■□□□□ 0.34
SSBP1-214ENST00000498107 CLSTN3Q9BQT9 956 aa17.16■□□□□ 0.34
SSBP1-214ENST00000498107 DNAJC25Q9H1X3 360 aa17.16■□□□□ 0.34
SSBP1-214ENST00000498107 DZANK1Q9NVP4 752 aa17.16■□□□□ 0.34
SSBP1-214ENST00000498107 CLDND1Q9NY35 253 aa17.16■□□□□ 0.34
SSBP1-214ENST00000498107 NFE2L3Q9Y4A8 694 aa17.16■□□□□ 0.34
SSBP1-214ENST00000498107 TIMM13Q9Y5L4 95 aaPredicted RBP17.16■□□□□ 0.34
SSBP1-214ENST00000498107 CDY1Q9Y6F8 540 aa17.16■□□□□ 0.34
SSBP1-214ENST00000498107 COL6A3P12111 3177 aa17.15■□□□□ 0.34
SSBP1-214ENST00000498107 ASS1P00966 412 aaKnown RBP17.15■□□□□ 0.34
SSBP1-214ENST00000498107 AFPP02771 609 aaKnown RBP17.15■□□□□ 0.34
SSBP1-214ENST00000498107 RPL17P18621 184 aaKnown RBP17.15■□□□□ 0.34
SSBP1-214ENST00000498107 EEF1GP26641 437 aaKnown RBP17.15■□□□□ 0.34
SSBP1-214ENST00000498107 OR1D2P34982 312 aa17.15■□□□□ 0.34
SSBP1-214ENST00000498107 MTIF2P46199 727 aaKnown RBP17.15■□□□□ 0.34
SSBP1-214ENST00000498107 FMO5P49326 533 aa17.15■□□□□ 0.34
SSBP1-214ENST00000498107 CLCN4P51793 760 aa17.15■□□□□ 0.34
SSBP1-214ENST00000498107 MYL7Q01449 175 aa17.15■□□□□ 0.34
SSBP1-214ENST00000498107 MYL5Q02045 173 aa17.15■□□□□ 0.34
SSBP1-214ENST00000498107 RAB33AQ14088 237 aa17.15■□□□□ 0.34
SSBP1-214ENST00000498107 CTC1Q2NKJ3 1217 aa17.15■□□□□ 0.34
SSBP1-214ENST00000498107 ANO6Q4KMQ2 910 aa17.15■□□□□ 0.34
SSBP1-214ENST00000498107 WDR44Q5JSH3 913 aa17.15■□□□□ 0.34
SSBP1-214ENST00000498107 WSCD1Q658N2 575 aa17.15■□□□□ 0.34
SSBP1-214ENST00000498107 EP400NLQ6ZTU2 488 aa17.15■□□□□ 0.34
SSBP1-214ENST00000498107 C11orf57Q6ZUT1 292 aaPredicted RBP17.15■□□□□ 0.34
SSBP1-214ENST00000498107 ADGRF2Q8IZF7 708 aa17.15■□□□□ 0.34
SSBP1-214ENST00000498107 PDCL2Q8N4E4 241 aa17.15■□□□□ 0.34
SSBP1-214ENST00000498107 TAS1R2Q8TE23 839 aa17.15■□□□□ 0.34
SSBP1-214ENST00000498107 FAXDC2Q96IV6 333 aa17.15■□□□□ 0.34
SSBP1-214ENST00000498107 BPIFA3Q9BQP9 254 aa17.15■□□□□ 0.34
SSBP1-214ENST00000498107 XYLT2Q9H1B5 865 aa17.15■□□□□ 0.34
SSBP1-214ENST00000498107 RAB20Q9NX57 234 aa17.15■□□□□ 0.34
SSBP1-214ENST00000498107 FBXL5Q9UKA1 691 aa17.15■□□□□ 0.34
SSBP1-214ENST00000498107 MAFFQ9ULX9 164 aa17.15■□□□□ 0.34
SSBP1-214ENST00000498107 L1RE1Q9UN81 338 aa17.15■□□□□ 0.34
SSBP1-214ENST00000498107 HCFC2Q9Y5Z7 792 aa17.15■□□□□ 0.34
SSBP1-214ENST00000498107 SMTNL1A8MU46 457 aa17.14■□□□□ 0.33
SSBP1-214ENST00000498107 TBC1D4O60343 1298 aa17.14■□□□□ 0.33
SSBP1-214ENST00000498107 TACC1O75410 805 aa17.14■□□□□ 0.33
SSBP1-214ENST00000498107 HOXB8P17481 243 aaPredicted RBP17.14■□□□□ 0.33
SSBP1-214ENST00000498107 PCSK1P29120 753 aa17.14■□□□□ 0.33
SSBP1-214ENST00000498107 GTF2F1P35269 517 aaKnown RBP eCLIP17.14■□□□□ 0.33
SSBP1-214ENST00000498107 KCNH2Q12809 1159 aa17.14■□□□□ 0.33
SSBP1-214ENST00000498107 ZSCAN23Q3MJ62 389 aa17.14■□□□□ 0.33
SSBP1-214ENST00000498107 TPGS2Q68CL5 300 aa17.14■□□□□ 0.33
SSBP1-214ENST00000498107 PALB2Q86YC2 1186 aa17.14■□□□□ 0.33
SSBP1-214ENST00000498107 GLYCTKQ8IVS8 523 aa17.14■□□□□ 0.33
SSBP1-214ENST00000498107 ANKRD20A12PQ8NF67 263 aa17.14■□□□□ 0.33
SSBP1-214ENST00000498107 SLC22A17Q8WUG5 538 aa17.14■□□□□ 0.33
SSBP1-214ENST00000498107 PLEKHA4Q9H4M7 779 aa17.14■□□□□ 0.33
SSBP1-214ENST00000498107 UBE2ZQ9H832 354 aaPredicted RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms