RNA–Protein interactions for RNA: ENST00000491086.5

RNF13-215, Transcript of ring finger protein 13, human

TSL 2

Gene RNF13, Length 1,104 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF13-215	ENST00000491086	EYS	Q5T1H1	3165 aa		13.89	□□□□□ -0.19
RNF13-215	ENST00000491086	PLXNA4	Q9HCM2	1894 aa		13.89	□□□□□ -0.19
RNF13-215	ENST00000491086	COL6A3	P12111	3177 aa		13.89	□□□□□ -0.19
RNF13-215	ENST00000491086	SOWAHD	A6NJG2	315 aa		13.89	□□□□□ -0.19
RNF13-215	ENST00000491086	RFXAP	O00287	272 aa		13.89	□□□□□ -0.19
RNF13-215	ENST00000491086	TULP1	O00294	542 aa	Predicted RBP	13.89	□□□□□ -0.19
RNF13-215	ENST00000491086	AMH	P03971	560 aa		13.89	□□□□□ -0.19
RNF13-215	ENST00000491086	TH	P07101	528 aa		13.89	□□□□□ -0.19
RNF13-215	ENST00000491086	FGFR1	P11362	822 aa		13.89	□□□□□ -0.19
RNF13-215	ENST00000491086	STAT1	P42224	750 aa		13.89	□□□□□ -0.19
RNF13-215	ENST00000491086	GATM	P50440	423 aa		13.89	□□□□□ -0.19
RNF13-215	ENST00000491086	ZNF132	P52740	706 aa		13.89	□□□□□ -0.19
RNF13-215	ENST00000491086	MFAP3	P55082	362 aa		13.89	□□□□□ -0.19
RNF13-215	ENST00000491086	DSC1	Q08554	894 aa		13.89	□□□□□ -0.19
RNF13-215	ENST00000491086	TRPC3	Q13507	836 aa		13.89	□□□□□ -0.19
RNF13-215	ENST00000491086	ARHGAP44	Q17R89	818 aa		13.89	□□□□□ -0.19
RNF13-215	ENST00000491086	ZNF699	Q32M78	642 aa		13.89	□□□□□ -0.19
RNF13-215	ENST00000491086	TMTC1	Q8IUR5	882 aa		13.89	□□□□□ -0.19
RNF13-215	ENST00000491086	GPIHBP1	Q8IV16	184 aa		13.89	□□□□□ -0.19
RNF13-215	ENST00000491086	HPDL	Q96IR7	371 aa		13.89	□□□□□ -0.19
RNF13-215	ENST00000491086	FAM81B	Q96LP2	452 aa		13.89	□□□□□ -0.19
RNF13-215	ENST00000491086	CASD1	Q96PB1	797 aa		13.89	□□□□□ -0.19
RNF13-215	ENST00000491086	SPAG5	Q96R06	1193 aa		13.89	□□□□□ -0.19
RNF13-215	ENST00000491086	NIF3L1	Q9GZT8	377 aa		13.89	□□□□□ -0.19
RNF13-215	ENST00000491086	CACNG4	Q9UBN1	327 aa		13.89	□□□□□ -0.19
RNF13-215	ENST00000491086	NENF	Q9UMX5	172 aa		13.89	□□□□□ -0.19
RNF13-215	ENST00000491086	PCDHA11	Q9Y5I1	949 aa		13.89	□□□□□ -0.19
RNF13-215	ENST00000491086	ARHGAP6	O43182	974 aa		13.88	□□□□□ -0.19
RNF13-215	ENST00000491086	XPOT	O43592	962 aa	Known RBP	13.88	□□□□□ -0.19
RNF13-215	ENST00000491086	GFPT2	O94808	682 aa		13.88	□□□□□ -0.19
RNF13-215	ENST00000491086	DDHD2	O94830	711 aa		13.88	□□□□□ -0.19
RNF13-215	ENST00000491086	GJB5	O95377	273 aa		13.88	□□□□□ -0.19
RNF13-215	ENST00000491086	SERPING1	P05155	500 aa		13.88	□□□□□ -0.19
RNF13-215	ENST00000491086	KRT19	P08727	400 aa		13.88	□□□□□ -0.19
RNF13-215	ENST00000491086	FER	P16591	822 aa		13.88	□□□□□ -0.19
RNF13-215	ENST00000491086	TBXAS1	P24557	533 aa	Predicted RBP	13.88	□□□□□ -0.19
RNF13-215	ENST00000491086	GRIK3	Q13003	919 aa		13.88	□□□□□ -0.19
RNF13-215	ENST00000491086	CYP26C1	Q6V0L0	522 aa		13.88	□□□□□ -0.19
RNF13-215	ENST00000491086	ZNF571	Q7Z3V5	609 aa	Predicted RBP	13.88	□□□□□ -0.19
RNF13-215	ENST00000491086	RNF169	Q8NCN4	708 aa		13.88	□□□□□ -0.19
RNF13-215	ENST00000491086	C3orf58	Q8NDZ4	430 aa		13.88	□□□□□ -0.19
RNF13-215	ENST00000491086	KIAA1524	Q8TCG1	905 aa		13.88	□□□□□ -0.19
RNF13-215	ENST00000491086	WHAMM	Q8TF30	809 aa		13.88	□□□□□ -0.19
RNF13-215	ENST00000491086	PAAF1	Q9BRP4	392 aa		13.88	□□□□□ -0.19
RNF13-215	ENST00000491086	SLC28A3	Q9HAS3	691 aa		13.88	□□□□□ -0.19
RNF13-215	ENST00000491086	SLC38A7	Q9NVC3	462 aa		13.88	□□□□□ -0.19
RNF13-215	ENST00000491086	GDAP2	Q9NXN4	497 aa		13.88	□□□□□ -0.19
RNF13-215	ENST00000491086	REXO2	Q9Y3B8	237 aa	Known RBP	13.88	□□□□□ -0.19
RNF13-215	ENST00000491086	NME7	Q9Y5B8	376 aa		13.88	□□□□□ -0.19
RNF13-215	ENST00000491086	MYH10	P35580	1976 aa		13.87	□□□□□ -0.19
RNF13-215	ENST00000491086	SSU72P8	A0A1W2PR75	194 aa		13.87	□□□□□ -0.19
RNF13-215	ENST00000491086	ZNF263	O14978	683 aa		13.87	□□□□□ -0.19
RNF13-215	ENST00000491086	LCA5L	O95447	670 aa		13.87	□□□□□ -0.19
RNF13-215	ENST00000491086	POMC	P01189	267 aa		13.87	□□□□□ -0.19
RNF13-215	ENST00000491086	CHRNB2	P17787	502 aa		13.87	□□□□□ -0.19
RNF13-215	ENST00000491086	AARS	P49588	968 aa	Known RBP eCLIP	13.87	□□□□□ -0.19
RNF13-215	ENST00000491086	LILRA4	P59901	499 aa		13.87	□□□□□ -0.19
RNF13-215	ENST00000491086	TAP1	Q03518	808 aa		13.87	□□□□□ -0.19
RNF13-215	ENST00000491086	PTK2	Q05397	1052 aa		13.87	□□□□□ -0.19
RNF13-215	ENST00000491086	ASIC2	Q16515	512 aa		13.87	□□□□□ -0.19
RNF13-215	ENST00000491086	UPP1	Q16831	310 aa		13.87	□□□□□ -0.19
RNF13-215	ENST00000491086	WDR72	Q3MJ13	1102 aa		13.87	□□□□□ -0.19
RNF13-215	ENST00000491086	ZNF667	Q5HYK9	610 aa		13.87	□□□□□ -0.19
RNF13-215	ENST00000491086	NOMO2	Q5JPE7	1267 aa		13.87	□□□□□ -0.19
RNF13-215	ENST00000491086	GPR153	Q6NV75	609 aa		13.87	□□□□□ -0.19
RNF13-215	ENST00000491086	ZNF280B	Q86YH2	543 aa		13.87	□□□□□ -0.19
RNF13-215	ENST00000491086	NPAS4	Q8IUM7	802 aa		13.87	□□□□□ -0.19
RNF13-215	ENST00000491086	COLGALT2	Q8IYK4	626 aa		13.87	□□□□□ -0.19
RNF13-215	ENST00000491086	SLC30A5	Q8TAD4	765 aa		13.87	□□□□□ -0.19
RNF13-215	ENST00000491086	ARNTL2	Q8WYA1	636 aa		13.87	□□□□□ -0.19
RNF13-215	ENST00000491086	DDX1	Q92499	740 aa	Known RBP	13.87	□□□□□ -0.19
RNF13-215	ENST00000491086	TRIM44	Q96DX7	344 aa	Predicted RBP	13.87	□□□□□ -0.19
RNF13-215	ENST00000491086	RPS6KC1	Q96S38	1066 aa		13.87	□□□□□ -0.19
RNF13-215	ENST00000491086	IMPG2	Q9BZV3	1241 aa		13.87	□□□□□ -0.19
RNF13-215	ENST00000491086	SMYD3	Q9H7B4	428 aa		13.87	□□□□□ -0.19
RNF13-215	ENST00000491086	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	13.87	□□□□□ -0.19
RNF13-215	ENST00000491086	RC3H2	Q9HBD1	1191 aa	Known RBP	13.87	□□□□□ -0.19
RNF13-215	ENST00000491086	ACP6	Q9NPH0	428 aa		13.87	□□□□□ -0.19
RNF13-215	ENST00000491086	KCND1	Q9NSA2	647 aa		13.87	□□□□□ -0.19
RNF13-215	ENST00000491086	TBC1D13	Q9NVG8	400 aa		13.87	□□□□□ -0.19
RNF13-215	ENST00000491086	NOCT	Q9UK39	431 aa	Known RBP	13.87	□□□□□ -0.19
RNF13-215	ENST00000491086	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	13.87	□□□□□ -0.19
RNF13-215	ENST00000491086	PTPRD	P23468	1912 aa		13.86	□□□□□ -0.19
RNF13-215	ENST00000491086	CYP26A1	O43174	497 aa		13.86	□□□□□ -0.19
RNF13-215	ENST00000491086	CSPG5	O95196	566 aa		13.86	□□□□□ -0.19
RNF13-215	ENST00000491086	WEE2	P0C1S8	567 aa		13.86	□□□□□ -0.19
RNF13-215	ENST00000491086	FOSL2	P15408	326 aa		13.86	□□□□□ -0.19
RNF13-215	ENST00000491086	RPL9	P32969	192 aa	Known RBP	13.86	□□□□□ -0.19
RNF13-215	ENST00000491086	EIF4A3	P38919	411 aa	Known RBP	13.86	□□□□□ -0.19
RNF13-215	ENST00000491086	RAP1GAP	P47736	663 aa		13.86	□□□□□ -0.19
RNF13-215	ENST00000491086	CLCNKB	P51801	687 aa		13.86	□□□□□ -0.19
RNF13-215	ENST00000491086	CDH8	P55286	799 aa		13.86	□□□□□ -0.19
RNF13-215	ENST00000491086	INCA1	Q0VD86	236 aa		13.86	□□□□□ -0.19
RNF13-215	ENST00000491086	TUSC3	Q13454	348 aa		13.86	□□□□□ -0.19
RNF13-215	ENST00000491086	SOWAHA	Q2M3V2	549 aa		13.86	□□□□□ -0.19
RNF13-215	ENST00000491086	PAN2	Q504Q3	1202 aa	Known RBP	13.86	□□□□□ -0.19
RNF13-215	ENST00000491086	GLB1L	Q6UWU2	654 aa		13.86	□□□□□ -0.19
RNF13-215	ENST00000491086	TOGARAM2	Q6ZUX3	1019 aa		13.86	□□□□□ -0.19
RNF13-215	ENST00000491086	PHOSPHO2	Q8TCD6	241 aa		13.86	□□□□□ -0.19
RNF13-215	ENST00000491086	EPS8L1	Q8TE68	723 aa		13.86	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 43 ms