RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 PLXND1Q9Y4D7 1925 aa16.74■□□□□ 0.27
U2AF1-211ENST00000486519 CFAP46Q8IYW2 2715 aa16.74■□□□□ 0.27
U2AF1-211ENST00000486519 ZNF462Q96JM2 2506 aa16.73■□□□□ 0.27
U2AF1-211ENST00000486519 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.73■□□□□ 0.27
U2AF1-211ENST00000486519 PRPF3O43395 683 aaKnown RBP16.73■□□□□ 0.27
U2AF1-211ENST00000486519 HNRNPLP14866 589 aaKnown RBP eCLIP16.73■□□□□ 0.27
U2AF1-211ENST00000486519 CDR1P51861 262 aa16.73■□□□□ 0.27
U2AF1-211ENST00000486519 LMAN2Q12907 356 aa16.73■□□□□ 0.27
U2AF1-211ENST00000486519 MAEAQ7L5Y9 396 aa16.73■□□□□ 0.27
U2AF1-211ENST00000486519 TMEFF1Q8IYR6 380 aa16.73■□□□□ 0.27
U2AF1-211ENST00000486519 CCDC12Q8WUD4 166 aaPredicted RBP16.73■□□□□ 0.27
U2AF1-211ENST00000486519 SLKQ9H2G2 1235 aaPredicted RBP16.73■□□□□ 0.27
U2AF1-211ENST00000486519 FZD8Q9H461 694 aa16.73■□□□□ 0.27
U2AF1-211ENST00000486519 NAP1L2Q9ULW6 460 aaPredicted RBP16.73■□□□□ 0.27
U2AF1-211ENST00000486519 CCL26Q9Y258 94 aa16.73■□□□□ 0.27
U2AF1-211ENST00000486519 MYO18BQ8IUG5 2567 aa16.73■□□□□ 0.27
U2AF1-211ENST00000486519 LRRIQ4A6NIV6 560 aa16.72■□□□□ 0.27
U2AF1-211ENST00000486519 PODXLO00592 558 aa16.72■□□□□ 0.27
U2AF1-211ENST00000486519 TRAPPC3O43617 180 aa16.72■□□□□ 0.27
U2AF1-211ENST00000486519 MCM2P49736 904 aa16.72■□□□□ 0.27
U2AF1-211ENST00000486519 RUNX3Q13761 415 aa16.72■□□□□ 0.27
U2AF1-211ENST00000486519 ZNF423Q2M1K9 1284 aa16.72■□□□□ 0.27
U2AF1-211ENST00000486519 ADCK5Q3MIX3 580 aa16.72■□□□□ 0.27
U2AF1-211ENST00000486519 ANO7Q6IWH7 933 aa16.72■□□□□ 0.27
U2AF1-211ENST00000486519 ZNF843Q8N446 348 aa16.72■□□□□ 0.27
U2AF1-211ENST00000486519 CEP120Q8N960 986 aa16.72■□□□□ 0.27
U2AF1-211ENST00000486519 MDGA1Q8NFP4 955 aa16.72■□□□□ 0.27
U2AF1-211ENST00000486519 BICD2Q8TD16 824 aa16.72■□□□□ 0.27
U2AF1-211ENST00000486519 ADAMTS14Q8WXS8 1223 aa16.72■□□□□ 0.27
U2AF1-211ENST00000486519 BSNDQ8WZ55 320 aa16.72■□□□□ 0.27
U2AF1-211ENST00000486519 HAS1Q92839 578 aa16.72■□□□□ 0.27
U2AF1-211ENST00000486519 ZMAT2Q96NC0 199 aaKnown RBP16.72■□□□□ 0.27
U2AF1-211ENST00000486519 FNBP1Q96RU3 617 aa16.72■□□□□ 0.27
U2AF1-211ENST00000486519 GTPBP2Q9BX10 602 aaKnown RBP16.72■□□□□ 0.27
U2AF1-211ENST00000486519 NUSAP1Q9BXS6 441 aaKnown RBP16.72■□□□□ 0.27
U2AF1-211ENST00000486519 ATXN3LQ9H3M9 355 aa16.72■□□□□ 0.27
U2AF1-211ENST00000486519 KCNMB3Q9NPA1 279 aa16.72■□□□□ 0.27
U2AF1-211ENST00000486519 OBP2AQ9NY56 170 aa16.72■□□□□ 0.27
U2AF1-211ENST00000486519 HECTD1Q9ULT8 2610 aa16.72■□□□□ 0.27
U2AF1-211ENST00000486519 ANK1P16157 1881 aa16.71■□□□□ 0.27
U2AF1-211ENST00000486519 CITO14578 2027 aa16.71■□□□□ 0.27
U2AF1-211ENST00000486519 SMIM28A0A1B0GU29 152 aa16.71■□□□□ 0.27
U2AF1-211ENST00000486519 PYCARD-AS1I3L0S3 204 aa16.71■□□□□ 0.27
U2AF1-211ENST00000486519 M0R2N6 131 aa16.71■□□□□ 0.27
U2AF1-211ENST00000486519 N4BP3O15049 544 aa16.71■□□□□ 0.27
U2AF1-211ENST00000486519 FTH1P19P0C7X4 201 aa16.71■□□□□ 0.27
U2AF1-211ENST00000486519 GABRR2P28476 465 aa16.71■□□□□ 0.27
U2AF1-211ENST00000486519 DUSP4Q13115 394 aa16.71■□□□□ 0.27
U2AF1-211ENST00000486519 EPHA7Q15375 998 aa16.71■□□□□ 0.27
U2AF1-211ENST00000486519 NPY5RQ15761 445 aa16.71■□□□□ 0.27
U2AF1-211ENST00000486519 USP39Q53GS9 565 aaKnown RBP16.71■□□□□ 0.27
U2AF1-211ENST00000486519 NCAPH2Q6IBW4 605 aa16.71■□□□□ 0.27
U2AF1-211ENST00000486519 OTUD6AQ7L8S5 288 aa16.71■□□□□ 0.27
U2AF1-211ENST00000486519 RASSF3Q86WH2 238 aa16.71■□□□□ 0.27
U2AF1-211ENST00000486519 BEST2Q8NFU1 509 aa16.71■□□□□ 0.27
U2AF1-211ENST00000486519 TSTD1Q8NFU3 115 aa16.71■□□□□ 0.27
U2AF1-211ENST00000486519 SLC27A5Q9Y2P5 690 aa16.71■□□□□ 0.27
U2AF1-211ENST00000486519 MUC22E2RYF6 1773 aaPredicted RBP16.71■□□□□ 0.27
U2AF1-211ENST00000486519 H7C4K7 107 aa16.7■□□□□ 0.26
U2AF1-211ENST00000486519 SYN3O14994 580 aa16.7■□□□□ 0.26
U2AF1-211ENST00000486519 SH3BP5O60239 455 aa16.7■□□□□ 0.26
U2AF1-211ENST00000486519 SLITRK3O94933 977 aa16.7■□□□□ 0.26
U2AF1-211ENST00000486519 CPB1P15086 417 aa16.7■□□□□ 0.26
U2AF1-211ENST00000486519 LIG1P18858 919 aa16.7■□□□□ 0.26
U2AF1-211ENST00000486519 PLCB2Q00722 1185 aa16.7■□□□□ 0.26
U2AF1-211ENST00000486519 INF2Q27J81 1249 aa16.7■□□□□ 0.26
U2AF1-211ENST00000486519 CDCA2Q69YH5 1023 aaPredicted RBP16.7■□□□□ 0.26
U2AF1-211ENST00000486519 SLC23A3Q6PIS1 610 aa16.7■□□□□ 0.26
U2AF1-211ENST00000486519 SLCO6A1Q86UG4 719 aa16.7■□□□□ 0.26
U2AF1-211ENST00000486519 TPH2Q8IWU9 490 aa16.7■□□□□ 0.26
U2AF1-211ENST00000486519 C18orf25Q96B23 403 aaPredicted RBP16.7■□□□□ 0.26
U2AF1-211ENST00000486519 UROC1Q96N76 676 aa16.7■□□□□ 0.26
U2AF1-211ENST00000486519 UBL7Q96S82 380 aaPredicted RBP16.7■□□□□ 0.26
U2AF1-211ENST00000486519 SLC46A2Q9BY10 475 aa16.7■□□□□ 0.26
U2AF1-211ENST00000486519 PRMT7Q9NVM4 692 aaPredicted RBP16.7■□□□□ 0.26
U2AF1-211ENST00000486519 DKC1O60832 514 aaKnown RBP eCLIP16.69■□□□□ 0.26
U2AF1-211ENST00000486519 CFIP05156 583 aa16.69■□□□□ 0.26
U2AF1-211ENST00000486519 CPA1P15085 419 aa16.69■□□□□ 0.26
U2AF1-211ENST00000486519 ITPKAP23677 461 aa16.69■□□□□ 0.26
U2AF1-211ENST00000486519 PSMD2Q13200 908 aa16.69■□□□□ 0.26
U2AF1-211ENST00000486519 NTRK3Q16288 839 aa16.69■□□□□ 0.26
U2AF1-211ENST00000486519 FAM187BQ17R55 369 aa16.69■□□□□ 0.26
U2AF1-211ENST00000486519 DNAJB7Q7Z6W7 309 aaPredicted RBP16.69■□□□□ 0.26
U2AF1-211ENST00000486519 SYT12Q8IV01 421 aa16.69■□□□□ 0.26
U2AF1-211ENST00000486519 DDX12PQ92771 950 aa16.69■□□□□ 0.26
U2AF1-211ENST00000486519 PRIMPOLQ96LW4 560 aa16.69■□□□□ 0.26
U2AF1-211ENST00000486519 P2RY13Q9BPV8 354 aa16.69■□□□□ 0.26
U2AF1-211ENST00000486519 CCDC113Q9H0I3 377 aa16.69■□□□□ 0.26
U2AF1-211ENST00000486519 RWDD1Q9H446 243 aaPredicted RBP16.69■□□□□ 0.26
U2AF1-211ENST00000486519 ZSWIM4Q9H7M6 989 aa16.69■□□□□ 0.26
U2AF1-211ENST00000486519 IL21Q9HBE4 155 aa16.69■□□□□ 0.26
U2AF1-211ENST00000486519 TBX20Q9UMR3 447 aa16.69■□□□□ 0.26
U2AF1-211ENST00000486519 USO1O60763 962 aaKnown RBP16.68■□□□□ 0.26
U2AF1-211ENST00000486519 DRD1P21728 446 aa16.68■□□□□ 0.26
U2AF1-211ENST00000486519 GJA4P35212 333 aa16.68■□□□□ 0.26
U2AF1-211ENST00000486519 NLRP5P59047 1200 aa16.68■□□□□ 0.26
U2AF1-211ENST00000486519 CYP4F3Q08477 520 aa16.68■□□□□ 0.26
U2AF1-211ENST00000486519 PRPF4BQ13523 1007 aaKnown RBP16.68■□□□□ 0.26
U2AF1-211ENST00000486519 TRIP6Q15654 476 aaKnown RBP16.68■□□□□ 0.26
U2AF1-211ENST00000486519 ZNF280DQ6N043 979 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms