RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 METTL23Q86XA0 190 aa25.92■■□□□ 1.74
CPNE1-223ENST00000475146 CSGALNACT2Q8N6G5 542 aa25.92■■□□□ 1.74
CPNE1-223ENST00000475146 GOLGA5Q8TBA6 731 aa25.92■■□□□ 1.74
CPNE1-223ENST00000475146 AFF4Q9UHB7 1163 aaKnown RBP25.92■■□□□ 1.74
CPNE1-223ENST00000475146 ITGA11Q9UKX5 1188 aa25.92■■□□□ 1.74
CPNE1-223ENST00000475146 KPNA7A9QM74 516 aa25.91■■□□□ 1.74
CPNE1-223ENST00000475146 N4BP1O75113 896 aaKnown RBP25.91■■□□□ 1.74
CPNE1-223ENST00000475146 SEC24AO95486 1093 aa25.91■■□□□ 1.74
CPNE1-223ENST00000475146 TNNC2P02585 160 aa25.91■■□□□ 1.74
CPNE1-223ENST00000475146 POU2F2P09086 479 aa25.91■■□□□ 1.74
CPNE1-223ENST00000475146 FSHRP23945 695 aa25.91■■□□□ 1.74
CPNE1-223ENST00000475146 DPYDQ12882 1025 aa25.91■■□□□ 1.74
CPNE1-223ENST00000475146 BFSP1Q12934 665 aa25.91■■□□□ 1.74
CPNE1-223ENST00000475146 RNF19BQ6ZMZ0 732 aa25.91■■□□□ 1.74
CPNE1-223ENST00000475146 TCEAL8Q8IYN2 117 aa25.91■■□□□ 1.74
CPNE1-223ENST00000475146 MYADMQ96S97 322 aa25.91■■□□□ 1.74
CPNE1-223ENST00000475146 INTS13Q9NVM9 706 aa25.91■■□□□ 1.74
CPNE1-223ENST00000475146 R3HCC1Q9Y3T6 440 aaKnown RBP25.91■■□□□ 1.74
CPNE1-223ENST00000475146 CYP11A1P05108 521 aa25.9■■□□□ 1.74
CPNE1-223ENST00000475146 MTMR3Q13615 1198 aa25.9■■□□□ 1.74
CPNE1-223ENST00000475146 C12orf56Q8IXR9 622 aa25.9■■□□□ 1.74
CPNE1-223ENST00000475146 OR5B17Q8NGF7 314 aa25.9■■□□□ 1.74
CPNE1-223ENST00000475146 PGLYRP2Q96PD5 576 aa25.9■■□□□ 1.74
CPNE1-223ENST00000475146 HCFC1R1Q9NWW0 138 aa25.9■■□□□ 1.74
CPNE1-223ENST00000475146 SORCS3Q9UPU3 1222 aa25.9■■□□□ 1.74
CPNE1-223ENST00000475146 INSL5Q9Y5Q6 135 aa25.9■■□□□ 1.74
CPNE1-223ENST00000475146 TSC2P49815 1807 aa25.9■■□□□ 1.74
CPNE1-223ENST00000475146 PTPRJQ12913 1337 aa25.89■■□□□ 1.74
CPNE1-223ENST00000475146 PRR33A8MZF0 331 aa25.89■■□□□ 1.74
CPNE1-223ENST00000475146 EXOC3O60645 756 aa25.89■■□□□ 1.74
CPNE1-223ENST00000475146 DLATP10515 647 aaKnown RBP25.89■■□□□ 1.74
CPNE1-223ENST00000475146 RBP5P82980 135 aa25.89■■□□□ 1.74
CPNE1-223ENST00000475146 CYP24A1Q07973 514 aa25.89■■□□□ 1.74
CPNE1-223ENST00000475146 MYBPC2Q14324 1141 aa25.89■■□□□ 1.74
CPNE1-223ENST00000475146 DUOXA2Q1HG44 320 aa25.89■■□□□ 1.74
CPNE1-223ENST00000475146 WSCD1Q658N2 575 aa25.89■■□□□ 1.74
CPNE1-223ENST00000475146 WDR49Q8IV35 697 aa25.89■■□□□ 1.74
CPNE1-223ENST00000475146 LRRC52Q8N7C0 313 aa25.89■■□□□ 1.74
CPNE1-223ENST00000475146 CCDC127Q96BQ5 260 aa25.89■■□□□ 1.74
CPNE1-223ENST00000475146 FNBP1Q96RU3 617 aa25.89■■□□□ 1.74
CPNE1-223ENST00000475146 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP25.89■■□□□ 1.74
CPNE1-223ENST00000475146 MAFFQ9ULX9 164 aa25.89■■□□□ 1.74
CPNE1-223ENST00000475146 RHOBTB3O94955 611 aa25.88■■□□□ 1.73
CPNE1-223ENST00000475146 PSMD6Q15008 389 aa25.88■■□□□ 1.73
CPNE1-223ENST00000475146 PABPC1LQ4VXU2 614 aaKnown RBP25.88■■□□□ 1.73
CPNE1-223ENST00000475146 TRIM67Q6ZTA4 783 aa25.88■■□□□ 1.73
CPNE1-223ENST00000475146 FMR1NBQ8N0W7 255 aaPredicted RBP25.88■■□□□ 1.73
CPNE1-223ENST00000475146 THEM5Q8N1Q8 247 aa25.88■■□□□ 1.73
CPNE1-223ENST00000475146 OR10T2Q8NGX3 314 aa25.88■■□□□ 1.73
CPNE1-223ENST00000475146 BORCS6Q96GS4 357 aa25.88■■□□□ 1.73
CPNE1-223ENST00000475146 TMEM209Q96SK2 561 aa25.88■■□□□ 1.73
CPNE1-223ENST00000475146 EPS15L1Q9UBC2 864 aa25.88■■□□□ 1.73
CPNE1-223ENST00000475146 DNMT3BQ9UBC3 853 aaKnown RBP25.88■■□□□ 1.73
CPNE1-223ENST00000475146 SIX4Q9UIU6 781 aa25.88■■□□□ 1.73
CPNE1-223ENST00000475146 CIZ1Q9ULV3 898 aaPredicted RBP25.88■■□□□ 1.73
CPNE1-223ENST00000475146 KIF20AO95235 890 aa25.87■■□□□ 1.73
CPNE1-223ENST00000475146 TNNI1P19237 187 aa25.87■■□□□ 1.73
CPNE1-223ENST00000475146 SIGLEC14Q08ET2 396 aa25.87■■□□□ 1.73
CPNE1-223ENST00000475146 GPR17Q13304 367 aa25.87■■□□□ 1.73
CPNE1-223ENST00000475146 SCARA3Q6AZY7 606 aa25.87■■□□□ 1.73
CPNE1-223ENST00000475146 CXorf38Q8TB03 319 aa25.87■■□□□ 1.73
CPNE1-223ENST00000475146 CGRRF1Q99675 332 aa25.87■■□□□ 1.73
CPNE1-223ENST00000475146 KCTD10Q9H3F6 313 aa25.87■■□□□ 1.73
CPNE1-223ENST00000475146 DOCK6Q96HP0 2047 aa25.87■■□□□ 1.73
CPNE1-223ENST00000475146 PRPF40AO75400 957 aaKnown RBP25.86■■□□□ 1.73
CPNE1-223ENST00000475146 TWF1Q12792 350 aa25.86■■□□□ 1.73
CPNE1-223ENST00000475146 KCNB1Q14721 858 aa25.86■■□□□ 1.73
CPNE1-223ENST00000475146 ELMOD1Q8N336 334 aa25.86■■□□□ 1.73
CPNE1-223ENST00000475146 SMOC2Q9H3U7 446 aa25.86■■□□□ 1.73
CPNE1-223ENST00000475146 YIPF1Q9Y548 306 aa25.86■■□□□ 1.73
CPNE1-223ENST00000475146 MYO10Q9HD67 2058 aa25.85■■□□□ 1.73
CPNE1-223ENST00000475146 TMEM221A6NGB7 291 aa25.85■■□□□ 1.73
CPNE1-223ENST00000475146 M0R296 226 aa25.85■■□□□ 1.73
CPNE1-223ENST00000475146 PDXKO00764 312 aa25.85■■□□□ 1.73
CPNE1-223ENST00000475146 HUS1O60921 280 aa25.85■■□□□ 1.73
CPNE1-223ENST00000475146 NR3C1P04150 777 aa25.85■■□□□ 1.73
CPNE1-223ENST00000475146 RHOP08100 348 aa25.85■■□□□ 1.73
CPNE1-223ENST00000475146 LAMP2P13473 410 aa25.85■■□□□ 1.73
CPNE1-223ENST00000475146 PTPN2P17706 415 aa25.85■■□□□ 1.73
CPNE1-223ENST00000475146 FAM160A1Q05DH4 1040 aa25.85■■□□□ 1.73
CPNE1-223ENST00000475146 MYO1EQ12965 1108 aa25.85■■□□□ 1.73
CPNE1-223ENST00000475146 PNOCQ13519 176 aa25.85■■□□□ 1.73
CPNE1-223ENST00000475146 UBALD2Q8IYN6 164 aa25.85■■□□□ 1.73
CPNE1-223ENST00000475146 ITFG1Q8TB96 612 aa25.85■■□□□ 1.73
CPNE1-223ENST00000475146 CORO1BQ9BR76 489 aa25.85■■□□□ 1.73
CPNE1-223ENST00000475146 KCNK12Q9HB15 430 aa25.85■■□□□ 1.73
CPNE1-223ENST00000475146 IGSF9Q9P2J2 1179 aa25.85■■□□□ 1.73
CPNE1-223ENST00000475146 CDH7Q9ULB5 785 aa25.85■■□□□ 1.73
CPNE1-223ENST00000475146 MAPK8IP1Q9UQF2 711 aa25.85■■□□□ 1.73
CPNE1-223ENST00000475146 MRPS23Q9Y3D9 190 aaKnown RBP25.85■■□□□ 1.73
CPNE1-223ENST00000475146 SNX9Q9Y5X1 595 aa25.85■■□□□ 1.73
CPNE1-223ENST00000475146 MTMR11A4FU01 709 aa25.84■■□□□ 1.73
CPNE1-223ENST00000475146 VNN2O95498 520 aa25.84■■□□□ 1.73
CPNE1-223ENST00000475146 COL9A1P20849 921 aa25.84■■□□□ 1.73
CPNE1-223ENST00000475146 DUSP4Q13115 394 aa25.84■■□□□ 1.73
CPNE1-223ENST00000475146 SLC39A12Q504Y0 691 aa25.84■■□□□ 1.73
CPNE1-223ENST00000475146 IQCEQ6IPM2 695 aa25.84■■□□□ 1.73
CPNE1-223ENST00000475146 TRAPPC11Q7Z392 1133 aa25.84■■□□□ 1.73
CPNE1-223ENST00000475146 PDCL2Q8N4E4 241 aa25.84■■□□□ 1.73
CPNE1-223ENST00000475146 ATAD1Q8NBU5 361 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms