RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 FAM83CQ9BQN1 747 aa7.38□□□□□ -1.23
HDAC3-206ENST00000471968 INO80BQ9C086 356 aaPredicted RBP7.38□□□□□ -1.23
HDAC3-206ENST00000471968 KAT14Q9H8E8 782 aa7.38□□□□□ -1.23
HDAC3-206ENST00000471968 KCNH7Q9NS40 1196 aa7.38□□□□□ -1.23
HDAC3-206ENST00000471968 AGPAT5Q9NUQ2 364 aa7.38□□□□□ -1.23
HDAC3-206ENST00000471968 OBP2AQ9NY56 170 aa7.38□□□□□ -1.23
HDAC3-206ENST00000471968 TPCN1Q9ULQ1 816 aa7.38□□□□□ -1.23
HDAC3-206ENST00000471968 HES2Q9Y543 173 aa7.38□□□□□ -1.23
HDAC3-206ENST00000471968 PCDHGA1Q9Y5H4 931 aa7.38□□□□□ -1.23
HDAC3-206ENST00000471968 NFASCO94856 1347 aa7.37□□□□□ -1.23
HDAC3-206ENST00000471968 A0A1B0GTW7 788 aa7.37□□□□□ -1.23
HDAC3-206ENST00000471968 TCRBV21S2A2A0A5A6 115 aa7.37□□□□□ -1.23
HDAC3-206ENST00000471968 WIPF3A6NGB9 483 aa7.37□□□□□ -1.23
HDAC3-206ENST00000471968 CASTOR2A6NHX0 329 aa7.37□□□□□ -1.23
HDAC3-206ENST00000471968 CCNE2O96020 404 aa7.37□□□□□ -1.23
HDAC3-206ENST00000471968 GLDCP23378 1020 aa7.37□□□□□ -1.23
HDAC3-206ENST00000471968 KIF5BP33176 963 aa7.37□□□□□ -1.23
HDAC3-206ENST00000471968 GJA4P35212 333 aa7.37□□□□□ -1.23
HDAC3-206ENST00000471968 SREBF1P36956 1147 aa7.37□□□□□ -1.23
HDAC3-206ENST00000471968 FOSBP53539 338 aa7.37□□□□□ -1.23
HDAC3-206ENST00000471968 INHBCP55103 352 aa7.37□□□□□ -1.23
HDAC3-206ENST00000471968 OXCT1P55809 520 aa7.37□□□□□ -1.23
HDAC3-206ENST00000471968 ARPP19P56211 112 aa7.37□□□□□ -1.23
HDAC3-206ENST00000471968 BNC1Q01954 994 aa7.37□□□□□ -1.23
HDAC3-206ENST00000471968 SRSF11Q05519 484 aaKnown RBP7.37□□□□□ -1.23
HDAC3-206ENST00000471968 TWF1Q12792 350 aa7.37□□□□□ -1.23
HDAC3-206ENST00000471968 TRAF1Q13077 416 aa7.37□□□□□ -1.23
HDAC3-206ENST00000471968 DNAJC3Q13217 504 aa7.37□□□□□ -1.23
HDAC3-206ENST00000471968 ITGB3BPQ13352 177 aaPredicted RBP7.37□□□□□ -1.23
HDAC3-206ENST00000471968 DRP2Q13474 957 aa7.37□□□□□ -1.23
HDAC3-206ENST00000471968 SF3A1Q15459 793 aaKnown RBP7.37□□□□□ -1.23
HDAC3-206ENST00000471968 SYCP2LQ5T4T6 812 aa7.37□□□□□ -1.23
HDAC3-206ENST00000471968 FBXL19Q6PCT2 694 aa7.37□□□□□ -1.23
HDAC3-206ENST00000471968 TCEAL8Q8IYN2 117 aa7.37□□□□□ -1.23
HDAC3-206ENST00000471968 ZCCHC9Q8N567 271 aaKnown RBP7.37□□□□□ -1.23
HDAC3-206ENST00000471968 OXER1Q8TDS5 423 aa7.37□□□□□ -1.23
HDAC3-206ENST00000471968 CUL5Q93034 780 aa7.37□□□□□ -1.23
HDAC3-206ENST00000471968 PIGSQ96S52 555 aa7.37□□□□□ -1.23
HDAC3-206ENST00000471968 SMG9Q9H0W8 520 aaKnown RBP7.37□□□□□ -1.23
HDAC3-206ENST00000471968 SLC25A18Q9H1K4 315 aa7.37□□□□□ -1.23
HDAC3-206ENST00000471968 LY9Q9HBG7 655 aa7.37□□□□□ -1.23
HDAC3-206ENST00000471968 DKK3Q9UBP4 350 aa7.37□□□□□ -1.23
HDAC3-206ENST00000471968 ANAPC4Q9UJX5 808 aa7.37□□□□□ -1.23
HDAC3-206ENST00000471968 TBX20Q9UMR3 447 aa7.37□□□□□ -1.23
HDAC3-206ENST00000471968 SSUH2Q9Y2M2 353 aa7.37□□□□□ -1.23
HDAC3-206ENST00000471968 IPPQ9Y573 584 aa7.37□□□□□ -1.23
HDAC3-206ENST00000471968 CCDC168Q8NDH2 2452 aa7.36□□□□□ -1.23
HDAC3-206ENST00000471968 KLRF2D3W0D1 207 aa7.36□□□□□ -1.23
HDAC3-206ENST00000471968 CBX4O00257 560 aa7.36□□□□□ -1.23
HDAC3-206ENST00000471968 RECQL4O94761 1208 aa7.36□□□□□ -1.23
HDAC3-206ENST00000471968 ABLIM3O94929 683 aa7.36□□□□□ -1.23
HDAC3-206ENST00000471968 MPOP05164 745 aa7.36□□□□□ -1.23
HDAC3-206ENST00000471968 ATF2P15336 505 aa7.36□□□□□ -1.23
HDAC3-206ENST00000471968 CASRP41180 1078 aa7.36□□□□□ -1.23
HDAC3-206ENST00000471968 USP11P51784 963 aa7.36□□□□□ -1.23
HDAC3-206ENST00000471968 ELAVL2Q12926 359 aaKnown RBP7.36□□□□□ -1.23
HDAC3-206ENST00000471968 ZSCAN23Q3MJ62 389 aa7.36□□□□□ -1.23
HDAC3-206ENST00000471968 ARL13BQ3SXY8 428 aa7.36□□□□□ -1.23
HDAC3-206ENST00000471968 CCDC184Q52MB2 194 aa7.36□□□□□ -1.23
HDAC3-206ENST00000471968 WDR45BQ5MNZ6 344 aa7.36□□□□□ -1.23
HDAC3-206ENST00000471968 GPR158Q5T848 1215 aa7.36□□□□□ -1.23
HDAC3-206ENST00000471968 MAMDC2Q7Z304 686 aaPredicted RBP7.36□□□□□ -1.23
HDAC3-206ENST00000471968 ALLCQ8N6M5 410 aa7.36□□□□□ -1.23
HDAC3-206ENST00000471968 KBTBD3Q8NAB2 608 aa7.36□□□□□ -1.23
HDAC3-206ENST00000471968 TXNDC5Q8NBS9 432 aaKnown RBP7.36□□□□□ -1.23
HDAC3-206ENST00000471968 ZNF564Q8TBZ8 553 aaPredicted RBP7.36□□□□□ -1.23
HDAC3-206ENST00000471968 VCPIP1Q96JH7 1222 aa7.36□□□□□ -1.23
HDAC3-206ENST00000471968 MIR1-1HGQ9H1L0 117 aa7.36□□□□□ -1.23
HDAC3-206ENST00000471968 WDR70Q9NW82 654 aa7.36□□□□□ -1.23
HDAC3-206ENST00000471968 CLCA2Q9UQC9 943 aa7.36□□□□□ -1.23
HDAC3-206ENST00000471968 TNNQ9UQP3 1299 aa7.36□□□□□ -1.23
HDAC3-206ENST00000471968 CEP192Q8TEP8 1941 aa7.35□□□□□ -1.23
HDAC3-206ENST00000471968 IGHV1OR15-9A0A0B4J2B8 117 aa7.35□□□□□ -1.23
HDAC3-206ENST00000471968 ZNF316A6NFI3 1004 aaPredicted RBP7.35□□□□□ -1.23
HDAC3-206ENST00000471968 K7EQS6 105 aa7.35□□□□□ -1.23
HDAC3-206ENST00000471968 SGK1O00141 431 aa7.35□□□□□ -1.23
HDAC3-206ENST00000471968 ENC1O14682 589 aa7.35□□□□□ -1.23
HDAC3-206ENST00000471968 FOXP2O15409 715 aa7.35□□□□□ -1.23
HDAC3-206ENST00000471968 ZFYP08048 801 aaPredicted RBP7.35□□□□□ -1.23
HDAC3-206ENST00000471968 CDK4P11802 303 aa7.35□□□□□ -1.23
HDAC3-206ENST00000471968 ERVPABLB-1P60509 514 aa7.35□□□□□ -1.23
HDAC3-206ENST00000471968 GRIK3Q13003 919 aa7.35□□□□□ -1.23
HDAC3-206ENST00000471968 DDX10Q13206 875 aaKnown RBP7.35□□□□□ -1.23
HDAC3-206ENST00000471968 SART3Q15020 963 aaKnown RBP7.35□□□□□ -1.23
HDAC3-206ENST00000471968 FHL5Q5TD97 284 aa7.35□□□□□ -1.23
HDAC3-206ENST00000471968 MIS18BP1Q6P0N0 1132 aa7.35□□□□□ -1.23
HDAC3-206ENST00000471968 KDM7AQ6ZMT4 941 aa7.35□□□□□ -1.23
HDAC3-206ENST00000471968 ATCAYQ86WG3 371 aa7.35□□□□□ -1.23
HDAC3-206ENST00000471968 DGKHQ86XP1 1220 aa7.35□□□□□ -1.23
HDAC3-206ENST00000471968 CNNM3Q8NE01 707 aa7.35□□□□□ -1.23
HDAC3-206ENST00000471968 GSTCDQ8NEC7 633 aa7.35□□□□□ -1.23
HDAC3-206ENST00000471968 ZNF419Q96HQ0 510 aaPredicted RBP7.35□□□□□ -1.23
HDAC3-206ENST00000471968 NLRP4Q96MN2 994 aa7.35□□□□□ -1.23
HDAC3-206ENST00000471968 EIF2AQ9BY44 585 aaKnown RBP7.35□□□□□ -1.23
HDAC3-206ENST00000471968 ATXN3LQ9H3M9 355 aa7.35□□□□□ -1.23
HDAC3-206ENST00000471968 ECHDC1Q9NTX5 307 aa7.35□□□□□ -1.23
HDAC3-206ENST00000471968 BACE2Q9Y5Z0 518 aa7.35□□□□□ -1.23
HDAC3-206ENST00000471968 U3KPZ7 1027 aaPredicted RBP7.35□□□□□ -1.23
HDAC3-206ENST00000471968 KIAA1549LQ6ZVL6 1849 aa7.35□□□□□ -1.23
HDAC3-206ENST00000471968 ATRQ13535 2644 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms