RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	STRA6	Q9BX79	667 aa		13.76	□□□□□ -0.21
FDPS-204	ENST00000461507	FAM86C1	Q9NVL1	165 aa		13.76	□□□□□ -0.21
FDPS-204	ENST00000461507	RBAK	Q9NYW8	714 aa	Predicted RBP	13.76	□□□□□ -0.21
FDPS-204	ENST00000461507	DNMT3B	Q9UBC3	853 aa	Known RBP	13.76	□□□□□ -0.21
FDPS-204	ENST00000461507	CPSF3	Q9UKF6	684 aa	Known RBP	13.76	□□□□□ -0.21
FDPS-204	ENST00000461507	RIF1	Q5UIP0	2472 aa	Known RBP	13.76	□□□□□ -0.21
FDPS-204	ENST00000461507	FANCM	Q8IYD8	2048 aa		13.76	□□□□□ -0.21
FDPS-204	ENST00000461507	COL4A2	P08572	1712 aa		13.76	□□□□□ -0.21
FDPS-204	ENST00000461507		H0Y858	1186 aa		13.75	□□□□□ -0.21
FDPS-204	ENST00000461507		H7C4K7	107 aa		13.75	□□□□□ -0.21
FDPS-204	ENST00000461507		M0QZQ0	153 aa		13.75	□□□□□ -0.21
FDPS-204	ENST00000461507	PI15	O43692	258 aa		13.75	□□□□□ -0.21
FDPS-204	ENST00000461507	KLRC4	O43908	158 aa		13.75	□□□□□ -0.21
FDPS-204	ENST00000461507	LDHA	P00338	332 aa	Known RBP	13.75	□□□□□ -0.21
FDPS-204	ENST00000461507	CFH	P08603	1231 aa		13.75	□□□□□ -0.21
FDPS-204	ENST00000461507	NFIC	P08651	508 aa		13.75	□□□□□ -0.21
FDPS-204	ENST00000461507	ATF2	P15336	505 aa		13.75	□□□□□ -0.21
FDPS-204	ENST00000461507	GART	P22102	1010 aa		13.75	□□□□□ -0.21
FDPS-204	ENST00000461507	MCM4	P33991	863 aa		13.75	□□□□□ -0.21
FDPS-204	ENST00000461507	GUCY2F	P51841	1108 aa		13.75	□□□□□ -0.21
FDPS-204	ENST00000461507	PABPC1L	Q4VXU2	614 aa	Known RBP	13.75	□□□□□ -0.21
FDPS-204	ENST00000461507	TPGS2	Q68CL5	300 aa		13.75	□□□□□ -0.21
FDPS-204	ENST00000461507	JADE1	Q6IE81	842 aa		13.75	□□□□□ -0.21
FDPS-204	ENST00000461507	ZNF280D	Q6N043	979 aa		13.75	□□□□□ -0.21
FDPS-204	ENST00000461507	PARM1	Q6UWI2	310 aa		13.75	□□□□□ -0.21
FDPS-204	ENST00000461507	MTSS1L	Q765P7	747 aa		13.75	□□□□□ -0.21
FDPS-204	ENST00000461507	FMR1NB	Q8N0W7	255 aa	Predicted RBP	13.75	□□□□□ -0.21
FDPS-204	ENST00000461507	GPD1L	Q8N335	351 aa		13.75	□□□□□ -0.21
FDPS-204	ENST00000461507	RDH13	Q8NBN7	331 aa		13.75	□□□□□ -0.21
FDPS-204	ENST00000461507	BEST2	Q8NFU1	509 aa		13.75	□□□□□ -0.21
FDPS-204	ENST00000461507	ITFG1	Q8TB96	612 aa		13.75	□□□□□ -0.21
FDPS-204	ENST00000461507	GPR152	Q8TDT2	470 aa		13.75	□□□□□ -0.21
FDPS-204	ENST00000461507	SCFD1	Q8WVM8	642 aa		13.75	□□□□□ -0.21
FDPS-204	ENST00000461507	ATOH1	Q92858	354 aa	Predicted RBP	13.75	□□□□□ -0.21
FDPS-204	ENST00000461507	ERCC4	Q92889	916 aa	Predicted RBP	13.75	□□□□□ -0.21
FDPS-204	ENST00000461507	ARHGEF3	Q9NR81	526 aa		13.75	□□□□□ -0.21
FDPS-204	ENST00000461507	HCFC1R1	Q9NWW0	138 aa		13.75	□□□□□ -0.21
FDPS-204	ENST00000461507	FBXL5	Q9UKA1	691 aa		13.75	□□□□□ -0.21
FDPS-204	ENST00000461507	MAFF	Q9ULX9	164 aa		13.75	□□□□□ -0.21
FDPS-204	ENST00000461507	UBQLN1	Q9UMX0	589 aa	Known RBP	13.75	□□□□□ -0.21
FDPS-204	ENST00000461507	PCDHB8	Q9UN66	801 aa		13.75	□□□□□ -0.21
FDPS-204	ENST00000461507	MAPK8IP1	Q9UQF2	711 aa		13.75	□□□□□ -0.21
FDPS-204	ENST00000461507	PATJ	Q8NI35	1801 aa		13.75	□□□□□ -0.21
FDPS-204	ENST00000461507	GVINP1	Q7Z2Y8	2422 aa		13.74	□□□□□ -0.21
FDPS-204	ENST00000461507	EXTL3	O43909	919 aa		13.74	□□□□□ -0.21
FDPS-204	ENST00000461507	PRPF40A	O75400	957 aa	Known RBP	13.74	□□□□□ -0.21
FDPS-204	ENST00000461507	KIF20A	O95235	890 aa		13.74	□□□□□ -0.21
FDPS-204	ENST00000461507	SMC2	O95347	1197 aa		13.74	□□□□□ -0.21
FDPS-204	ENST00000461507	ADSS	P30520	456 aa		13.74	□□□□□ -0.21
FDPS-204	ENST00000461507	TFAM	Q00059	246 aa	Known RBP	13.74	□□□□□ -0.21
FDPS-204	ENST00000461507	DPYD	Q12882	1025 aa		13.74	□□□□□ -0.21
FDPS-204	ENST00000461507	STK4	Q13043	487 aa		13.74	□□□□□ -0.21
FDPS-204	ENST00000461507	PSMD2	Q13200	908 aa		13.74	□□□□□ -0.21
FDPS-204	ENST00000461507	SLC5A9	Q2M3M2	681 aa		13.74	□□□□□ -0.21
FDPS-204	ENST00000461507	CD302	Q8IX05	232 aa		13.74	□□□□□ -0.21
FDPS-204	ENST00000461507	TMEM130	Q8N3G9	435 aa		13.74	□□□□□ -0.21
FDPS-204	ENST00000461507	DTWD2	Q8NBA8	298 aa		13.74	□□□□□ -0.21
FDPS-204	ENST00000461507	KIAA0895	Q8NCT3	520 aa		13.74	□□□□□ -0.21
FDPS-204	ENST00000461507	APPL2	Q8NEU8	664 aa		13.74	□□□□□ -0.21
FDPS-204	ENST00000461507	ZNF507	Q8TCN5	953 aa		13.74	□□□□□ -0.21
FDPS-204	ENST00000461507	SMARCE1	Q969G3	411 aa		13.74	□□□□□ -0.21
FDPS-204	ENST00000461507	TBC1D17	Q9HA65	648 aa		13.74	□□□□□ -0.21
FDPS-204	ENST00000461507	AGPAT3	Q9NRZ7	376 aa		13.74	□□□□□ -0.21
FDPS-204	ENST00000461507	HSPBP1	Q9NZL4	362 aa		13.74	□□□□□ -0.21
FDPS-204	ENST00000461507	R3HCC1	Q9Y3T6	440 aa	Known RBP	13.74	□□□□□ -0.21
FDPS-204	ENST00000461507	INSL5	Q9Y5Q6	135 aa		13.74	□□□□□ -0.21
FDPS-204	ENST00000461507	STYXL1	Q9Y6J8	313 aa		13.74	□□□□□ -0.21
FDPS-204	ENST00000461507	USP34	Q70CQ2	3546 aa		13.74	□□□□□ -0.21
FDPS-204	ENST00000461507	GFRA3	O60609	400 aa		13.73	□□□□□ -0.21
FDPS-204	ENST00000461507	MICAL2	O94851	1124 aa		13.73	□□□□□ -0.21
FDPS-204	ENST00000461507	OAZ2	O95190	189 aa		13.73	□□□□□ -0.21
FDPS-204	ENST00000461507	IL18RAP	O95256	599 aa		13.73	□□□□□ -0.21
FDPS-204	ENST00000461507	SEC24A	O95486	1093 aa		13.73	□□□□□ -0.21
FDPS-204	ENST00000461507	RHO	P08100	348 aa		13.73	□□□□□ -0.21
FDPS-204	ENST00000461507	EHHADH	Q08426	723 aa		13.73	□□□□□ -0.21
FDPS-204	ENST00000461507	KNOP1	Q1ED39	458 aa	Known RBP	13.73	□□□□□ -0.21
FDPS-204	ENST00000461507	CTXN3	Q4LDR2	81 aa		13.73	□□□□□ -0.21
FDPS-204	ENST00000461507	PRSS36	Q5K4E3	855 aa		13.73	□□□□□ -0.21
FDPS-204	ENST00000461507	EPM2AIP1	Q7L775	607 aa	Predicted RBP	13.73	□□□□□ -0.21
FDPS-204	ENST00000461507	ZSWIM2	Q8NEG5	633 aa		13.73	□□□□□ -0.21
FDPS-204	ENST00000461507	RPP25	Q9BUL9	199 aa	Known RBP	13.73	□□□□□ -0.21
FDPS-204	ENST00000461507	DDX23	Q9BUQ8	820 aa	Known RBP	13.73	□□□□□ -0.21
FDPS-204	ENST00000461507	OXCT2	Q9BYC2	517 aa	Predicted RBP	13.73	□□□□□ -0.21
FDPS-204	ENST00000461507	RMND1	Q9NWS8	449 aa		13.73	□□□□□ -0.21
FDPS-204	ENST00000461507	GDE1	Q9NZC3	331 aa		13.73	□□□□□ -0.21
FDPS-204	ENST00000461507	DLGAP2	Q9P1A6	1054 aa		13.73	□□□□□ -0.21
FDPS-204	ENST00000461507	AFF4	Q9UHB7	1163 aa	Known RBP	13.73	□□□□□ -0.21
FDPS-204	ENST00000461507	CA14	Q9ULX7	337 aa		13.73	□□□□□ -0.21
FDPS-204	ENST00000461507	POLI	Q9UNA4	740 aa		13.73	□□□□□ -0.21
FDPS-204	ENST00000461507	MYO15A	Q9UKN7	3530 aa		13.73	□□□□□ -0.21
FDPS-204	ENST00000461507	SCN1A	P35498	2009 aa		13.73	□□□□□ -0.21
FDPS-204	ENST00000461507	COL4A3	Q01955	1670 aa		13.72	□□□□□ -0.21
FDPS-204	ENST00000461507	ZNF233	A6NK53	670 aa		13.72	□□□□□ -0.21
FDPS-204	ENST00000461507	KIAA0391	O15091	583 aa	Known RBP	13.72	□□□□□ -0.21
FDPS-204	ENST00000461507	EXOC3	O60645	756 aa		13.72	□□□□□ -0.21
FDPS-204	ENST00000461507	ECI2	O75521	394 aa		13.72	□□□□□ -0.21
FDPS-204	ENST00000461507	LRG1	P02750	347 aa		13.72	□□□□□ -0.21
FDPS-204	ENST00000461507	KRT19	P08727	400 aa		13.72	□□□□□ -0.21
FDPS-204	ENST00000461507	TMEM191B	P0C7N4	346 aa		13.72	□□□□□ -0.21
FDPS-204	ENST00000461507	PAX3	P23760	479 aa		13.72	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms