RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 MTMR12Q9C0I1 747 aa10.88□□□□□ -0.67
RFX3-210ENST00000457373 FRMD4BQ9Y2L6 1034 aa10.88□□□□□ -0.67
RFX3-210ENST00000457373 CDY1Q9Y6F8 540 aa10.88□□□□□ -0.67
RFX3-210ENST00000457373 TRIM49BA6NDI0 452 aa10.87□□□□□ -0.67
RFX3-210ENST00000457373 H7C4K7 107 aa10.87□□□□□ -0.67
RFX3-210ENST00000457373 M0QZQ0 153 aa10.87□□□□□ -0.67
RFX3-210ENST00000457373 CYB561D2O14569 222 aa10.87□□□□□ -0.67
RFX3-210ENST00000457373 ADAM12O43184 909 aa10.87□□□□□ -0.67
RFX3-210ENST00000457373 MBTPS2O43462 519 aa10.87□□□□□ -0.67
RFX3-210ENST00000457373 TGM5O43548 720 aa10.87□□□□□ -0.67
RFX3-210ENST00000457373 GLUD1P00367 558 aa10.87□□□□□ -0.67
RFX3-210ENST00000457373 RPL13P26373 211 aaKnown RBP10.87□□□□□ -0.67
RFX3-210ENST00000457373 RBP5P82980 135 aa10.87□□□□□ -0.67
RFX3-210ENST00000457373 STIM1Q13586 685 aa10.87□□□□□ -0.67
RFX3-210ENST00000457373 MORC3Q14149 939 aa10.87□□□□□ -0.67
RFX3-210ENST00000457373 MYBPC2Q14324 1141 aa10.87□□□□□ -0.67
RFX3-210ENST00000457373 NFIL3Q16649 462 aa10.87□□□□□ -0.67
RFX3-210ENST00000457373 SV2CQ496J9 727 aa10.87□□□□□ -0.67
RFX3-210ENST00000457373 CTXN3Q4LDR2 81 aa10.87□□□□□ -0.67
RFX3-210ENST00000457373 COBLL1Q53SF7 1204 aa10.87□□□□□ -0.67
RFX3-210ENST00000457373 TJAP1Q5JTD0 557 aa10.87□□□□□ -0.67
RFX3-210ENST00000457373 RARS2Q5T160 578 aaKnown RBP10.87□□□□□ -0.67
RFX3-210ENST00000457373 ANKRD40Q6AI12 368 aa10.87□□□□□ -0.67
RFX3-210ENST00000457373 CENPPQ6IPU0 288 aa10.87□□□□□ -0.67
RFX3-210ENST00000457373 KLHL10Q6JEL2 608 aa10.87□□□□□ -0.67
RFX3-210ENST00000457373 SYCE2Q6PIF2 218 aa10.87□□□□□ -0.67
RFX3-210ENST00000457373 RSPO2Q6UXX9 243 aaPredicted RBP10.87□□□□□ -0.67
RFX3-210ENST00000457373 TRAPPC11Q7Z392 1133 aa10.87□□□□□ -0.67
RFX3-210ENST00000457373 USP37Q86T82 979 aa10.87□□□□□ -0.67
RFX3-210ENST00000457373 ZNF516Q92618 1163 aa10.87□□□□□ -0.67
RFX3-210ENST00000457373 EEF2KMTQ96G04 330 aa10.87□□□□□ -0.67
RFX3-210ENST00000457373 ZNF560Q96MR9 790 aa10.87□□□□□ -0.67
RFX3-210ENST00000457373 GTPBP4Q9BZE4 634 aaKnown RBP10.87□□□□□ -0.67
RFX3-210ENST00000457373 CLSTN2Q9H4D0 955 aa10.87□□□□□ -0.67
RFX3-210ENST00000457373 MAN1C1Q9NR34 630 aa10.87□□□□□ -0.67
RFX3-210ENST00000457373 KIAA1468Q9P260 1216 aa10.87□□□□□ -0.67
RFX3-210ENST00000457373 MTRRQ9UBK8 725 aa10.87□□□□□ -0.67
RFX3-210ENST00000457373 ITGA11Q9UKX5 1188 aa10.87□□□□□ -0.67
RFX3-210ENST00000457373 BACE2Q9Y5Z0 518 aa10.87□□□□□ -0.67
RFX3-210ENST00000457373 LRRIQ3A6PVS8 624 aaPredicted RBP10.86□□□□□ -0.67
RFX3-210ENST00000457373 KPNA7A9QM74 516 aa10.86□□□□□ -0.67
RFX3-210ENST00000457373 CETN3O15182 167 aa10.86□□□□□ -0.67
RFX3-210ENST00000457373 PHACTR2O75167 634 aa10.86□□□□□ -0.67
RFX3-210ENST00000457373 AKAP3O75969 853 aa10.86□□□□□ -0.67
RFX3-210ENST00000457373 CLSTN1O94985 981 aa10.86□□□□□ -0.67
RFX3-210ENST00000457373 CST3P01034 146 aaPredicted RBP10.86□□□□□ -0.67
RFX3-210ENST00000457373 WEE2P0C1S8 567 aa10.86□□□□□ -0.67
RFX3-210ENST00000457373 ODC1P11926 461 aa10.86□□□□□ -0.67
RFX3-210ENST00000457373 BMP1P13497 986 aa10.86□□□□□ -0.67
RFX3-210ENST00000457373 BMP6P22004 513 aa10.86□□□□□ -0.67
RFX3-210ENST00000457373 PAX3P23760 479 aa10.86□□□□□ -0.67
RFX3-210ENST00000457373 CCNE1P24864 410 aa10.86□□□□□ -0.67
RFX3-210ENST00000457373 PSMC2P35998 433 aaKnown RBP10.86□□□□□ -0.67
RFX3-210ENST00000457373 PNPLA4P41247 253 aa10.86□□□□□ -0.67
RFX3-210ENST00000457373 AARSP49588 968 aaKnown RBP eCLIP10.86□□□□□ -0.67
RFX3-210ENST00000457373 PMS1P54277 932 aaKnown RBP10.86□□□□□ -0.67
RFX3-210ENST00000457373 DLG4P78352 724 aa10.86□□□□□ -0.67
RFX3-210ENST00000457373 YWHAHQ04917 246 aaPredicted RBP10.86□□□□□ -0.67
RFX3-210ENST00000457373 MRPL58Q14197 206 aaKnown RBP10.86□□□□□ -0.67
RFX3-210ENST00000457373 EDRF1Q3B7T1 1238 aa10.86□□□□□ -0.67
RFX3-210ENST00000457373 PUS10Q3MIT2 529 aaKnown RBP10.86□□□□□ -0.67
RFX3-210ENST00000457373 ZCWPW2Q504Y3 356 aa10.86□□□□□ -0.67
RFX3-210ENST00000457373 ZNF280DQ6N043 979 aa10.86□□□□□ -0.67
RFX3-210ENST00000457373 LILRA6Q6PI73 481 aa10.86□□□□□ -0.67
RFX3-210ENST00000457373 METTL23Q86XA0 190 aa10.86□□□□□ -0.67
RFX3-210ENST00000457373 FAM186BQ8IYM0 893 aa10.86□□□□□ -0.67
RFX3-210ENST00000457373 KREMEN2Q8NCW0 462 aa10.86□□□□□ -0.67
RFX3-210ENST00000457373 PARD3BQ8TEW8 1205 aa10.86□□□□□ -0.67
RFX3-210ENST00000457373 TMEM174Q8WUU8 243 aa10.86□□□□□ -0.67
RFX3-210ENST00000457373 BORCS6Q96GS4 357 aa10.86□□□□□ -0.67
RFX3-210ENST00000457373 DHTKD1Q96HY7 919 aaPredicted RBP10.86□□□□□ -0.67
RFX3-210ENST00000457373 NUP62CLQ9H1M0 184 aa10.86□□□□□ -0.67
RFX3-210ENST00000457373 MMRN2Q9H8L6 949 aa10.86□□□□□ -0.67
RFX3-210ENST00000457373 DZANK1Q9NVP4 752 aa10.86□□□□□ -0.67
RFX3-210ENST00000457373 SIX4Q9UIU6 781 aa10.86□□□□□ -0.67
RFX3-210ENST00000457373 FBXL5Q9UKA1 691 aa10.86□□□□□ -0.67
RFX3-210ENST00000457373 CDH23Q9H251 3354 aa10.85□□□□□ -0.67
RFX3-210ENST00000457373 ARHGEF37A1IGU5 675 aa10.85□□□□□ -0.67
RFX3-210ENST00000457373 PPP1R3GB7ZBB8 358 aa10.85□□□□□ -0.67
RFX3-210ENST00000457373 PSMA7O14818 248 aa10.85□□□□□ -0.67
RFX3-210ENST00000457373 NUDT7P0C024 238 aa10.85□□□□□ -0.67
RFX3-210ENST00000457373 KRT13P13646 458 aa10.85□□□□□ -0.67
RFX3-210ENST00000457373 HOXB8P17481 243 aaPredicted RBP10.85□□□□□ -0.67
RFX3-210ENST00000457373 TYMPP19971 482 aa10.85□□□□□ -0.67
RFX3-210ENST00000457373 PPP1R2P41236 205 aa10.85□□□□□ -0.67
RFX3-210ENST00000457373 VAMP7P51809 220 aa10.85□□□□□ -0.67
RFX3-210ENST00000457373 STX17P56962 302 aa10.85□□□□□ -0.67
RFX3-210ENST00000457373 ROR1Q01973 937 aa10.85□□□□□ -0.67
RFX3-210ENST00000457373 MYO1EQ12965 1108 aa10.85□□□□□ -0.67
RFX3-210ENST00000457373 SMAD4Q13485 552 aaKnown RBP10.85□□□□□ -0.67
RFX3-210ENST00000457373 BIRC3Q13489 604 aa10.85□□□□□ -0.67
RFX3-210ENST00000457373 TRPC3Q13507 836 aa10.85□□□□□ -0.67
RFX3-210ENST00000457373 RAB33AQ14088 237 aa10.85□□□□□ -0.67
RFX3-210ENST00000457373 OVOS1Q6IE37 1185 aa10.85□□□□□ -0.67
RFX3-210ENST00000457373 CES5AQ6NT32 575 aa10.85□□□□□ -0.67
RFX3-210ENST00000457373 ELMSAN1Q6PJG2 1045 aa10.85□□□□□ -0.67
RFX3-210ENST00000457373 TMC5Q6UXY8 1006 aa10.85□□□□□ -0.67
RFX3-210ENST00000457373 LRRC52Q8N7C0 313 aa10.85□□□□□ -0.67
RFX3-210ENST00000457373 TRIML1Q8N9V2 468 aa10.85□□□□□ -0.67
RFX3-210ENST00000457373 CXorf38Q8TB03 319 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 763.1 ms