RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 NECAB3Q96P71 396 aaPredicted RBP9.89□□□□□ -0.83
RFX3-207ENST00000449190 POP1Q99575 1024 aaKnown RBP9.89□□□□□ -0.83
RFX3-207ENST00000449190 FUCA2Q9BTY2 467 aa9.89□□□□□ -0.83
RFX3-207ENST00000449190 S1PR5Q9H228 398 aa9.89□□□□□ -0.83
RFX3-207ENST00000449190 CXCL16Q9H2A7 254 aa9.89□□□□□ -0.83
RFX3-207ENST00000449190 MMRN2Q9H8L6 949 aa9.89□□□□□ -0.83
RFX3-207ENST00000449190 RXFP1Q9HBX9 757 aa9.89□□□□□ -0.83
RFX3-207ENST00000449190 CHST7Q9NS84 486 aa9.89□□□□□ -0.83
RFX3-207ENST00000449190 TUBGCP4Q9UGJ1 667 aa9.89□□□□□ -0.83
RFX3-207ENST00000449190 ADAM28Q9UKQ2 775 aa9.89□□□□□ -0.83
RFX3-207ENST00000449190 BARX2Q9UMQ3 279 aaPredicted RBP9.89□□□□□ -0.83
RFX3-207ENST00000449190 AGAP1Q9UPQ3 857 aa9.89□□□□□ -0.83
RFX3-207ENST00000449190 CHD9Q3L8U1 2897 aa9.89□□□□□ -0.83
RFX3-207ENST00000449190 KCNJ18B7U540 433 aa9.88□□□□□ -0.83
RFX3-207ENST00000449190 PES1O00541 588 aaKnown RBP9.88□□□□□ -0.83
RFX3-207ENST00000449190 MEFVO15553 781 aaPredicted RBP9.88□□□□□ -0.83
RFX3-207ENST00000449190 N4BP1O75113 896 aaKnown RBP9.88□□□□□ -0.83
RFX3-207ENST00000449190 AFPP02771 609 aaKnown RBP9.88□□□□□ -0.83
RFX3-207ENST00000449190 ITGB3P05106 788 aa9.88□□□□□ -0.83
RFX3-207ENST00000449190 URODP06132 367 aa9.88□□□□□ -0.83
RFX3-207ENST00000449190 TRIM49P0CI25 452 aa9.88□□□□□ -0.83
RFX3-207ENST00000449190 TRIM49CP0CI26 452 aa9.88□□□□□ -0.83
RFX3-207ENST00000449190 PRKCSHP14314 528 aaPredicted RBP9.88□□□□□ -0.83
RFX3-207ENST00000449190 KLRC2P26717 231 aa9.88□□□□□ -0.83
RFX3-207ENST00000449190 LRPAP1P30533 357 aa9.88□□□□□ -0.83
RFX3-207ENST00000449190 CLCNKBP51801 687 aa9.88□□□□□ -0.83
RFX3-207ENST00000449190 MARSP56192 900 aaKnown RBP9.88□□□□□ -0.83
RFX3-207ENST00000449190 DLG4P78352 724 aa9.88□□□□□ -0.83
RFX3-207ENST00000449190 CLDN10P78369 228 aa9.88□□□□□ -0.83
RFX3-207ENST00000449190 ELAVL2Q12926 359 aaKnown RBP9.88□□□□□ -0.83
RFX3-207ENST00000449190 KCNJ12Q14500 433 aa9.88□□□□□ -0.83
RFX3-207ENST00000449190 CLUL1Q15846 466 aa9.88□□□□□ -0.83
RFX3-207ENST00000449190 UPP1Q16831 310 aa9.88□□□□□ -0.83
RFX3-207ENST00000449190 C9orf57Q5W0N0 161 aa9.88□□□□□ -0.83
RFX3-207ENST00000449190 KRT39Q6A163 491 aa9.88□□□□□ -0.83
RFX3-207ENST00000449190 KIAA1841Q6NSI8 718 aa9.88□□□□□ -0.83
RFX3-207ENST00000449190 LLGL2Q6P1M3 1020 aa9.88□□□□□ -0.83
RFX3-207ENST00000449190 SYCE2Q6PIF2 218 aa9.88□□□□□ -0.83
RFX3-207ENST00000449190 DSTYKQ6XUX3 929 aa9.88□□□□□ -0.83
RFX3-207ENST00000449190 ADHFE1Q8IWW8 467 aa9.88□□□□□ -0.83
RFX3-207ENST00000449190 GJD3Q8N144 294 aa9.88□□□□□ -0.83
RFX3-207ENST00000449190 EFCAB3Q8N7B9 438 aa9.88□□□□□ -0.83
RFX3-207ENST00000449190 OR5B17Q8NGF7 314 aa9.88□□□□□ -0.83
RFX3-207ENST00000449190 FAM200AQ8TCP9 573 aa9.88□□□□□ -0.83
RFX3-207ENST00000449190 BORCS6Q96GS4 357 aa9.88□□□□□ -0.83
RFX3-207ENST00000449190 ZNF560Q96MR9 790 aa9.88□□□□□ -0.83
RFX3-207ENST00000449190 MED15Q96RN5 788 aa9.88□□□□□ -0.83
RFX3-207ENST00000449190 GPR62Q9BZJ7 368 aa9.88□□□□□ -0.83
RFX3-207ENST00000449190 IMPG2Q9BZV3 1241 aa9.88□□□□□ -0.83
RFX3-207ENST00000449190 MTMR12Q9C0I1 747 aa9.88□□□□□ -0.83
RFX3-207ENST00000449190 GOLGA2P5Q9HBQ8 144 aa9.88□□□□□ -0.83
RFX3-207ENST00000449190 CBX8Q9HC52 389 aa9.88□□□□□ -0.83
RFX3-207ENST00000449190 TMEM8AQ9HCN3 771 aa9.88□□□□□ -0.83
RFX3-207ENST00000449190 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.88□□□□□ -0.83
RFX3-207ENST00000449190 SAMSN1Q9NSI8 373 aaKnown RBP9.88□□□□□ -0.83
RFX3-207ENST00000449190 FANCLQ9NW38 375 aa9.88□□□□□ -0.83
RFX3-207ENST00000449190 HCFC2Q9Y5Z7 792 aa9.88□□□□□ -0.83
RFX3-207ENST00000449190 KIAA1671Q9BY89 1806 aa9.88□□□□□ -0.83
RFX3-207ENST00000449190 LAMA2P24043 3122 aaKnown RBP9.88□□□□□ -0.83
RFX3-207ENST00000449190 TMEM189-UBE2V1I3L0A0 370 aa9.87□□□□□ -0.83
RFX3-207ENST00000449190 C4BPAP04003 597 aaKnown RBP9.87□□□□□ -0.83
RFX3-207ENST00000449190 CNPP09543 421 aaKnown RBP9.87□□□□□ -0.83
RFX3-207ENST00000449190 P4HA1P13674 534 aa9.87□□□□□ -0.83
RFX3-207ENST00000449190 POLR2BP30876 1174 aaKnown RBP9.87□□□□□ -0.83
RFX3-207ENST00000449190 ATICP31939 592 aa9.87□□□□□ -0.83
RFX3-207ENST00000449190 PIK3CAP42336 1068 aa9.87□□□□□ -0.83
RFX3-207ENST00000449190 GCLMP48507 274 aa9.87□□□□□ -0.83
RFX3-207ENST00000449190 GLUD2P49448 558 aa9.87□□□□□ -0.83
RFX3-207ENST00000449190 TAF6P49848 677 aa9.87□□□□□ -0.83
RFX3-207ENST00000449190 MXI1P50539 228 aa9.87□□□□□ -0.83
RFX3-207ENST00000449190 GUCY2FP51841 1108 aa9.87□□□□□ -0.83
RFX3-207ENST00000449190 WNT7BP56706 349 aa9.87□□□□□ -0.83
RFX3-207ENST00000449190 LSM11P83369 360 aaKnown RBP eCLIP9.87□□□□□ -0.83
RFX3-207ENST00000449190 RBM10P98175 930 aaKnown RBP9.87□□□□□ -0.83
RFX3-207ENST00000449190 ITIH3Q06033 890 aa9.87□□□□□ -0.83
RFX3-207ENST00000449190 SOX4Q06945 474 aaPredicted RBP9.87□□□□□ -0.83
RFX3-207ENST00000449190 KCNH2Q12809 1159 aa9.87□□□□□ -0.83
RFX3-207ENST00000449190 NCOA4Q13772 614 aa9.87□□□□□ -0.83
RFX3-207ENST00000449190 SGSM1Q2NKQ1 1148 aa9.87□□□□□ -0.83
RFX3-207ENST00000449190 SV2CQ496J9 727 aa9.87□□□□□ -0.83
RFX3-207ENST00000449190 FILIP1LQ4L180 1135 aa9.87□□□□□ -0.83
RFX3-207ENST00000449190 HSP90AA4PQ58FG1 418 aa9.87□□□□□ -0.83
RFX3-207ENST00000449190 TCP11X2Q5H9J9 407 aa9.87□□□□□ -0.83
RFX3-207ENST00000449190 WDR44Q5JSH3 913 aa9.87□□□□□ -0.83
RFX3-207ENST00000449190 SV2AQ7L0J3 742 aa9.87□□□□□ -0.83
RFX3-207ENST00000449190 TRIM59Q8IWR1 403 aa9.87□□□□□ -0.83
RFX3-207ENST00000449190 LRRC52Q8N7C0 313 aa9.87□□□□□ -0.83
RFX3-207ENST00000449190 C1orf127Q8N9H9 656 aa9.87□□□□□ -0.83
RFX3-207ENST00000449190 PLEKHO2Q8TD55 490 aa9.87□□□□□ -0.83
RFX3-207ENST00000449190 HDAC7Q8WUI4 952 aa9.87□□□□□ -0.83
RFX3-207ENST00000449190 SUSD6Q92537 303 aa9.87□□□□□ -0.83
RFX3-207ENST00000449190 ZNF516Q92618 1163 aa9.87□□□□□ -0.83
RFX3-207ENST00000449190 RABGGTAQ92696 567 aa9.87□□□□□ -0.83
RFX3-207ENST00000449190 HPDLQ96IR7 371 aa9.87□□□□□ -0.83
RFX3-207ENST00000449190 PAAF1Q9BRP4 392 aa9.87□□□□□ -0.83
RFX3-207ENST00000449190 TUBGCP2Q9BSJ2 902 aa9.87□□□□□ -0.83
RFX3-207ENST00000449190 ADAM7Q9H2U9 754 aa9.87□□□□□ -0.83
RFX3-207ENST00000449190 DZANK1Q9NVP4 752 aa9.87□□□□□ -0.83
RFX3-207ENST00000449190 FNIP2Q9P278 1114 aa9.87□□□□□ -0.83
RFX3-207ENST00000449190 DPP7Q9UHL4 492 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms