RNA–Protein interactions for RNA: ENST00000439955.1

AC009404.1-202, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 968 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-202ENST00000439955 CLP1Q92989 425 aaKnown RBP12.62□□□□□ -0.39
AC009404.1-202ENST00000439955 BAG1Q99933 345 aaPredicted RBP12.62□□□□□ -0.39
AC009404.1-202ENST00000439955 TRIM6Q9C030 488 aaPredicted RBP12.62□□□□□ -0.39
AC009404.1-202ENST00000439955 TOPORSQ9NS56 1045 aaPredicted RBP12.62□□□□□ -0.39
AC009404.1-202ENST00000439955 ZNHIT6Q9NWK9 470 aaKnown RBP12.62□□□□□ -0.39
AC009404.1-202ENST00000439955 RAB20Q9NX57 234 aa12.62□□□□□ -0.39
AC009404.1-202ENST00000439955 RWDD3Q9Y3V2 267 aa12.62□□□□□ -0.39
AC009404.1-202ENST00000439955 C2CD2Q9Y426 696 aa12.62□□□□□ -0.39
AC009404.1-202ENST00000439955 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.62□□□□□ -0.39
AC009404.1-202ENST00000439955 MRPL42Q9Y6G3 142 aaKnown RBP12.62□□□□□ -0.39
AC009404.1-202ENST00000439955 CITO14578 2027 aa12.62□□□□□ -0.39
AC009404.1-202ENST00000439955 PTPRJQ12913 1337 aa12.62□□□□□ -0.39
AC009404.1-202ENST00000439955 PLXNA3P51805 1871 aa12.61□□□□□ -0.39
AC009404.1-202ENST00000439955 NLRC5Q86WI3 1866 aa12.61□□□□□ -0.39
AC009404.1-202ENST00000439955 MYO7AQ13402 2215 aa12.61□□□□□ -0.39
AC009404.1-202ENST00000439955 RNF225M0QZC1 329 aaPredicted RBP12.61□□□□□ -0.39
AC009404.1-202ENST00000439955 PER2O15055 1255 aa12.61□□□□□ -0.39
AC009404.1-202ENST00000439955 ARHGAP6O43182 974 aa12.61□□□□□ -0.39
AC009404.1-202ENST00000439955 ITGB1P05556 798 aa12.61□□□□□ -0.39
AC009404.1-202ENST00000439955 SKILP12757 684 aa12.61□□□□□ -0.39
AC009404.1-202ENST00000439955 YARSP54577 528 aaKnown RBP12.61□□□□□ -0.39
AC009404.1-202ENST00000439955 OSTNP61366 133 aa12.61□□□□□ -0.39
AC009404.1-202ENST00000439955 LRMPQ12912 555 aa12.61□□□□□ -0.39
AC009404.1-202ENST00000439955 LPIN1Q14693 890 aa12.61□□□□□ -0.39
AC009404.1-202ENST00000439955 SLC10A6Q3KNW5 377 aa12.61□□□□□ -0.39
AC009404.1-202ENST00000439955 TDRD10Q5VZ19 366 aaKnown RBP12.61□□□□□ -0.39
AC009404.1-202ENST00000439955 TWF2Q6IBS0 349 aaKnown RBP12.61□□□□□ -0.39
AC009404.1-202ENST00000439955 ENOSF1Q7L5Y1 443 aa12.61□□□□□ -0.39
AC009404.1-202ENST00000439955 ZSCAN30Q86W11 494 aa12.61□□□□□ -0.39
AC009404.1-202ENST00000439955 TAS1R2Q8TE23 839 aa12.61□□□□□ -0.39
AC009404.1-202ENST00000439955 POF1BQ8WVV4 589 aa12.61□□□□□ -0.39
AC009404.1-202ENST00000439955 APBB2Q92870 758 aa12.61□□□□□ -0.39
AC009404.1-202ENST00000439955 PPP2R3CQ969Q6 453 aa12.61□□□□□ -0.39
AC009404.1-202ENST00000439955 ANKRD36BP1Q96IX9 119 aa12.61□□□□□ -0.39
AC009404.1-202ENST00000439955 APOL5Q9BWW9 433 aa12.61□□□□□ -0.39
AC009404.1-202ENST00000439955 EIF2AQ9BY44 585 aaKnown RBP12.61□□□□□ -0.39
AC009404.1-202ENST00000439955 AGO3Q9H9G7 860 aaKnown RBP12.61□□□□□ -0.39
AC009404.1-202ENST00000439955 RC3H2Q9HBD1 1191 aaKnown RBP12.61□□□□□ -0.39
AC009404.1-202ENST00000439955 PADI3Q9ULW8 664 aa12.61□□□□□ -0.39
AC009404.1-202ENST00000439955 DCHS1Q96JQ0 3298 aa12.6□□□□□ -0.39
AC009404.1-202ENST00000439955 DMDP11532 3685 aa12.6□□□□□ -0.39
AC009404.1-202ENST00000439955 PDCD11Q14690 1871 aaKnown RBP12.6□□□□□ -0.39
AC009404.1-202ENST00000439955 LACTBL1A8MY62 500 aa12.6□□□□□ -0.39
AC009404.1-202ENST00000439955 ZNF623O75123 536 aa12.6□□□□□ -0.39
AC009404.1-202ENST00000439955 HLA-DRAP01903 254 aa12.6□□□□□ -0.39
AC009404.1-202ENST00000439955 TNNC2P02585 160 aa12.6□□□□□ -0.39
AC009404.1-202ENST00000439955 TMEM191BP0C7N4 346 aa12.6□□□□□ -0.39
AC009404.1-202ENST00000439955 SKIP12755 728 aa12.6□□□□□ -0.39
AC009404.1-202ENST00000439955 ZSCAN20P17040 1043 aaPredicted RBP12.6□□□□□ -0.39
AC009404.1-202ENST00000439955 NBL1P41271 181 aa12.6□□□□□ -0.39
AC009404.1-202ENST00000439955 PIK3CAP42336 1068 aa12.6□□□□□ -0.39
AC009404.1-202ENST00000439955 JAM2P57087 298 aa12.6□□□□□ -0.39
AC009404.1-202ENST00000439955 GCNT1Q02742 428 aa12.6□□□□□ -0.39
AC009404.1-202ENST00000439955 NFX1Q12986 1120 aaKnown RBP12.6□□□□□ -0.39
AC009404.1-202ENST00000439955 BIRC3Q13489 604 aa12.6□□□□□ -0.39
AC009404.1-202ENST00000439955 DSC3Q14574 896 aa12.6□□□□□ -0.39
AC009404.1-202ENST00000439955 PAN2Q504Q3 1202 aaKnown RBP12.6□□□□□ -0.39
AC009404.1-202ENST00000439955 XKR4Q5GH76 650 aa12.6□□□□□ -0.39
AC009404.1-202ENST00000439955 CYP26C1Q6V0L0 522 aa12.6□□□□□ -0.39
AC009404.1-202ENST00000439955 RRAGAQ7L523 313 aa12.6□□□□□ -0.39
AC009404.1-202ENST00000439955 TMTC1Q8IUR5 882 aa12.6□□□□□ -0.39
AC009404.1-202ENST00000439955 EFCAB13Q8IY85 973 aa12.6□□□□□ -0.39
AC009404.1-202ENST00000439955 TMEM105Q8N8V8 129 aa12.6□□□□□ -0.39
AC009404.1-202ENST00000439955 KLHL23Q8NBE8 558 aa12.6□□□□□ -0.39
AC009404.1-202ENST00000439955 OR5B17Q8NGF7 314 aa12.6□□□□□ -0.39
AC009404.1-202ENST00000439955 SPPL3Q8TCT6 385 aa12.6□□□□□ -0.39
AC009404.1-202ENST00000439955 SEMA4DQ92854 862 aa12.6□□□□□ -0.39
AC009404.1-202ENST00000439955 FAXDC2Q96IV6 333 aa12.6□□□□□ -0.39
AC009404.1-202ENST00000439955 RIPOR3Q96MK2 946 aa12.6□□□□□ -0.39
AC009404.1-202ENST00000439955 NT5C1BQ96P26 610 aa12.6□□□□□ -0.39
AC009404.1-202ENST00000439955 SPAG5Q96R06 1193 aa12.6□□□□□ -0.39
AC009404.1-202ENST00000439955 STK33Q9BYT3 514 aa12.6□□□□□ -0.39
AC009404.1-202ENST00000439955 IMPG2Q9BZV3 1241 aa12.6□□□□□ -0.39
AC009404.1-202ENST00000439955 C1orf112Q9NSG2 853 aa12.6□□□□□ -0.39
AC009404.1-202ENST00000439955 FAM105AQ9NUU6 356 aa12.6□□□□□ -0.39
AC009404.1-202ENST00000439955 AIPL1Q9NZN9 384 aa12.6□□□□□ -0.39
AC009404.1-202ENST00000439955 CNTN3Q9P232 1028 aa12.6□□□□□ -0.39
AC009404.1-202ENST00000439955 IPPQ9Y573 584 aa12.6□□□□□ -0.39
AC009404.1-202ENST00000439955 FHOD1Q9Y613 1164 aa12.6□□□□□ -0.39
AC009404.1-202ENST00000439955 MED19A0JLT2 244 aaPredicted RBP12.59□□□□□ -0.39
AC009404.1-202ENST00000439955 LRRC53A6NM62 1247 aa12.59□□□□□ -0.39
AC009404.1-202ENST00000439955 ENPP3O14638 875 aa12.59□□□□□ -0.39
AC009404.1-202ENST00000439955 MEFVO15553 781 aaPredicted RBP12.59□□□□□ -0.39
AC009404.1-202ENST00000439955 XPOTO43592 962 aaKnown RBP12.59□□□□□ -0.39
AC009404.1-202ENST00000439955 PHACTR2O75167 634 aa12.59□□□□□ -0.39
AC009404.1-202ENST00000439955 DGKIO75912 1065 aa12.59□□□□□ -0.39
AC009404.1-202ENST00000439955 RECQL4O94761 1208 aa12.59□□□□□ -0.39
AC009404.1-202ENST00000439955 CD52P31358 61 aa12.59□□□□□ -0.39
AC009404.1-202ENST00000439955 TFAMQ00059 246 aaKnown RBP12.59□□□□□ -0.39
AC009404.1-202ENST00000439955 GOLGA8FQ08AF8 430 aa12.59□□□□□ -0.39
AC009404.1-202ENST00000439955 GOLGA8DPQ0D2H9 430 aa12.59□□□□□ -0.39
AC009404.1-202ENST00000439955 TMEM132DQ14C87 1099 aa12.59□□□□□ -0.39
AC009404.1-202ENST00000439955 WDR44Q5JSH3 913 aa12.59□□□□□ -0.39
AC009404.1-202ENST00000439955 SFMBT2Q5VUG0 894 aa12.59□□□□□ -0.39
AC009404.1-202ENST00000439955 LMBRD2Q68DH5 695 aaPredicted RBP12.59□□□□□ -0.39
AC009404.1-202ENST00000439955 JADE1Q6IE81 842 aa12.59□□□□□ -0.39
AC009404.1-202ENST00000439955 IQCEQ6IPM2 695 aa12.59□□□□□ -0.39
AC009404.1-202ENST00000439955 PHLDB3Q6NSJ2 640 aa12.59□□□□□ -0.39
AC009404.1-202ENST00000439955 ALKAL1Q6UXT8 129 aa12.59□□□□□ -0.39
AC009404.1-202ENST00000439955 TRAPPC11Q7Z392 1133 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms