RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 CDT1Q9H211 546 aa11.08□□□□□ -0.64
CPNE1-218ENST00000439806 FZD8Q9H461 694 aa11.08□□□□□ -0.64
CPNE1-218ENST00000439806 EFCC1Q9HA90 598 aa11.08□□□□□ -0.64
CPNE1-218ENST00000439806 VTA1Q9NP79 307 aa11.08□□□□□ -0.64
CPNE1-218ENST00000439806 PDGFCQ9NRA1 345 aa11.08□□□□□ -0.64
CPNE1-218ENST00000439806 HOMER3Q9NSC5 361 aa11.08□□□□□ -0.64
CPNE1-218ENST00000439806 CISHQ9NSE2 258 aa11.08□□□□□ -0.64
CPNE1-218ENST00000439806 WHRNQ9P202 907 aa11.08□□□□□ -0.64
CPNE1-218ENST00000439806 ASIC3Q9UHC3 531 aa11.08□□□□□ -0.64
CPNE1-218ENST00000439806 FEZ2Q9UHY8 353 aaPredicted RBP11.08□□□□□ -0.64
CPNE1-218ENST00000439806 NOVA2Q9UNW9 492 aaKnown RBP11.08□□□□□ -0.64
CPNE1-218ENST00000439806 COL1A2P08123 1366 aa11.07□□□□□ -0.64
CPNE1-218ENST00000439806 B4GALT5O43286 388 aa11.07□□□□□ -0.64
CPNE1-218ENST00000439806 MED7O43513 233 aa11.07□□□□□ -0.64
CPNE1-218ENST00000439806 ZEB2O60315 1214 aa11.07□□□□□ -0.64
CPNE1-218ENST00000439806 C22orf31O95567 290 aa11.07□□□□□ -0.64
CPNE1-218ENST00000439806 KRT1P04264 644 aa11.07□□□□□ -0.64
CPNE1-218ENST00000439806 GJB1P08034 283 aa11.07□□□□□ -0.64
CPNE1-218ENST00000439806 NUDT17P0C025 328 aa11.07□□□□□ -0.64
CPNE1-218ENST00000439806 ATF2P15336 505 aa11.07□□□□□ -0.64
CPNE1-218ENST00000439806 GJA5P36382 358 aa11.07□□□□□ -0.64
CPNE1-218ENST00000439806 MDH1P40925 334 aaKnown RBP11.07□□□□□ -0.64
CPNE1-218ENST00000439806 TAS2R40P59535 323 aa11.07□□□□□ -0.64
CPNE1-218ENST00000439806 PPP2R2AP63151 447 aa11.07□□□□□ -0.64
CPNE1-218ENST00000439806 LACTBP83111 547 aaPredicted RBP11.07□□□□□ -0.64
CPNE1-218ENST00000439806 MBTD1Q05BQ5 628 aa11.07□□□□□ -0.64
CPNE1-218ENST00000439806 PTK6Q13882 451 aa11.07□□□□□ -0.64
CPNE1-218ENST00000439806 ZNF394Q53GI3 561 aa11.07□□□□□ -0.64
CPNE1-218ENST00000439806 ZNF667Q5HYK9 610 aa11.07□□□□□ -0.64
CPNE1-218ENST00000439806 EMC10Q5UCC4 262 aa11.07□□□□□ -0.64
CPNE1-218ENST00000439806 DCUN1D2Q6PH85 259 aa11.07□□□□□ -0.64
CPNE1-218ENST00000439806 FOXR1Q6PIV2 292 aa11.07□□□□□ -0.64
CPNE1-218ENST00000439806 EXD1Q8NHP7 514 aa11.07□□□□□ -0.64
CPNE1-218ENST00000439806 BCAS4Q8TDM0 211 aa11.07□□□□□ -0.64
CPNE1-218ENST00000439806 UPF1Q92900 1129 aaKnown RBP eCLIP11.07□□□□□ -0.64
CPNE1-218ENST00000439806 ART4Q93070 314 aa11.07□□□□□ -0.64
CPNE1-218ENST00000439806 SNF8Q96H20 258 aa11.07□□□□□ -0.64
CPNE1-218ENST00000439806 RBM41Q96IZ5 413 aaKnown RBP11.07□□□□□ -0.64
CPNE1-218ENST00000439806 SCLT1Q96NL6 688 aa11.07□□□□□ -0.64
CPNE1-218ENST00000439806 ZNF518BQ9C0D4 1074 aa11.07□□□□□ -0.64
CPNE1-218ENST00000439806 PABPC3Q9H361 631 aaKnown RBP11.07□□□□□ -0.64
CPNE1-218ENST00000439806 PTPRHQ9HD43 1115 aa11.07□□□□□ -0.64
CPNE1-218ENST00000439806 IVNS1ABPQ9Y6Y0 642 aa11.07□□□□□ -0.64
CPNE1-218ENST00000439806 CITO14578 2027 aa11.07□□□□□ -0.64
CPNE1-218ENST00000439806 RALGAPA2Q2PPJ7 1873 aa11.06□□□□□ -0.64
CPNE1-218ENST00000439806 EBAG9O00559 213 aa11.06□□□□□ -0.64
CPNE1-218ENST00000439806 GJB6O95452 261 aa11.06□□□□□ -0.64
CPNE1-218ENST00000439806 WEE2P0C1S8 567 aa11.06□□□□□ -0.64
CPNE1-218ENST00000439806 CXCL8P10145 99 aa11.06□□□□□ -0.64
CPNE1-218ENST00000439806 CYP2C8P10632 490 aa11.06□□□□□ -0.64
CPNE1-218ENST00000439806 MCF2P10911 925 aa11.06□□□□□ -0.64
CPNE1-218ENST00000439806 RALAP11233 206 aa11.06□□□□□ -0.64
CPNE1-218ENST00000439806 INSRRP14616 1297 aa11.06□□□□□ -0.64
CPNE1-218ENST00000439806 CD19P15391 556 aa11.06□□□□□ -0.64
CPNE1-218ENST00000439806 YBX3P16989 372 aaKnown RBP eCLIP11.06□□□□□ -0.642e-6■■■■□ 21.8
CPNE1-218ENST00000439806 MMP8P22894 467 aa11.06□□□□□ -0.64
CPNE1-218ENST00000439806 TMOD1P28289 359 aa11.06□□□□□ -0.64
CPNE1-218ENST00000439806 POLR2BP30876 1174 aaKnown RBP11.06□□□□□ -0.64
CPNE1-218ENST00000439806 CCT5P48643 541 aa11.06□□□□□ -0.64
CPNE1-218ENST00000439806 GUCY1A3Q02108 690 aa11.06□□□□□ -0.64
CPNE1-218ENST00000439806 CAV1Q03135 178 aa11.06□□□□□ -0.64
CPNE1-218ENST00000439806 POU5F1BQ06416 359 aa11.06□□□□□ -0.64
CPNE1-218ENST00000439806 ARHGAP1Q07960 439 aa11.06□□□□□ -0.64
CPNE1-218ENST00000439806 ADCY2Q08462 1091 aa11.06□□□□□ -0.64
CPNE1-218ENST00000439806 KYAT1Q16773 422 aa11.06□□□□□ -0.64
CPNE1-218ENST00000439806 FAM187BQ17R55 369 aa11.06□□□□□ -0.64
CPNE1-218ENST00000439806 CCDC25Q86WR0 208 aa11.06□□□□□ -0.64
CPNE1-218ENST00000439806 CDR2LQ86X02 465 aaPredicted RBP11.06□□□□□ -0.64
CPNE1-218ENST00000439806 ERICH1Q86X53 443 aa11.06□□□□□ -0.64
CPNE1-218ENST00000439806 RCOR2Q8IZ40 523 aa11.06□□□□□ -0.64
CPNE1-218ENST00000439806 CEP120Q8N960 986 aa11.06□□□□□ -0.64
CPNE1-218ENST00000439806 BBOF1Q8ND07 529 aa11.06□□□□□ -0.64
CPNE1-218ENST00000439806 ATL2Q8NHH9 583 aa11.06□□□□□ -0.64
CPNE1-218ENST00000439806 NFKBIZQ9BYH8 718 aa11.06□□□□□ -0.64
CPNE1-218ENST00000439806 OSBPL8Q9BZF1 889 aa11.06□□□□□ -0.64
CPNE1-218ENST00000439806 FAM107BQ9H098 131 aa11.06□□□□□ -0.64
CPNE1-218ENST00000439806 RABEP2Q9H5N1 569 aa11.06□□□□□ -0.64
CPNE1-218ENST00000439806 CHST7Q9NS84 486 aa11.06□□□□□ -0.64
CPNE1-218ENST00000439806 NXF1Q9UBU9 619 aaKnown RBP11.06□□□□□ -0.64
CPNE1-218ENST00000439806 STRIP2Q9ULQ0 834 aa11.06□□□□□ -0.64
CPNE1-218ENST00000439806 PCDHGC3Q9UN70 934 aa11.06□□□□□ -0.64
CPNE1-218ENST00000439806 POLIQ9UNA4 740 aa11.06□□□□□ -0.64
CPNE1-218ENST00000439806 AKT3Q9Y243 479 aa11.06□□□□□ -0.64
CPNE1-218ENST00000439806 RRP15Q9Y3B9 282 aaKnown RBP11.06□□□□□ -0.64
CPNE1-218ENST00000439806 A0A087WZ62 844 aa11.05□□□□□ -0.64
CPNE1-218ENST00000439806 TMEM191CA6NGB0 347 aa11.05□□□□□ -0.64
CPNE1-218ENST00000439806 SRRM3A6NNA2 597 aaPredicted RBP11.05□□□□□ -0.64
CPNE1-218ENST00000439806 LACTBL1A8MY62 500 aa11.05□□□□□ -0.64
CPNE1-218ENST00000439806 PDHXO00330 501 aa11.05□□□□□ -0.64
CPNE1-218ENST00000439806 NDUFAB1O14561 156 aa11.05□□□□□ -0.64
CPNE1-218ENST00000439806 RGS16O15492 202 aaPredicted RBP11.05□□□□□ -0.64
CPNE1-218ENST00000439806 NFICP08651 508 aa11.05□□□□□ -0.64
CPNE1-218ENST00000439806 STAG3L1P0CL83 205 aa11.05□□□□□ -0.64
CPNE1-218ENST00000439806 CETPP11597 493 aa11.05□□□□□ -0.64
CPNE1-218ENST00000439806 RARGP13631 454 aa11.05□□□□□ -0.64
CPNE1-218ENST00000439806 ITIH2P19823 946 aa11.05□□□□□ -0.64
CPNE1-218ENST00000439806 FGFR4P22455 802 aa11.05□□□□□ -0.64
CPNE1-218ENST00000439806 ADORA2AP29274 412 aa11.05□□□□□ -0.64
CPNE1-218ENST00000439806 CDH5P33151 784 aaPredicted RBP11.05□□□□□ -0.64
CPNE1-218ENST00000439806 LSP1P33241 339 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms