RNA–Protein interactions for RNA: ENST00000434755.5

NOD1-206, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 4,610 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-206ENST00000434755 ZNF131P52739 623 aa11.23□□□□□ -0.61
NOD1-206ENST00000434755 CDR2Q01850 454 aa11.23□□□□□ -0.61
NOD1-206ENST00000434755 NME3Q13232 169 aa11.23□□□□□ -0.61
NOD1-206ENST00000434755 USP38Q8NB14 1042 aa11.23□□□□□ -0.61
NOD1-206ENST00000434755 MCUQ8NE86 351 aa11.23□□□□□ -0.61
NOD1-206ENST00000434755 DDX27Q96GQ7 796 aaKnown RBP11.23□□□□□ -0.61
NOD1-206ENST00000434755 RNPC3Q96LT9 517 aaKnown RBP11.23□□□□□ -0.61
NOD1-206ENST00000434755 FAM49BQ9NUQ9 324 aa11.23□□□□□ -0.61
NOD1-206ENST00000434755 RAB21Q9UL25 225 aa11.23□□□□□ -0.61
NOD1-206ENST00000434755 TYW5A2RUC4 315 aaKnown RBP11.23□□□□□ -0.61
NOD1-206ENST00000434755 WNT7AO00755 349 aa11.23□□□□□ -0.61
NOD1-206ENST00000434755 ACSL3O95573 720 aa11.23□□□□□ -0.61
NOD1-206ENST00000434755 CPB1P15086 417 aa11.23□□□□□ -0.61
NOD1-206ENST00000434755 SDC4P31431 198 aa11.23□□□□□ -0.61
NOD1-206ENST00000434755 GCNT1Q02742 428 aa11.23□□□□□ -0.61
NOD1-206ENST00000434755 C11orf63Q6NUN7 778 aa11.23□□□□□ -0.61
NOD1-206ENST00000434755 WDR49Q8IV35 697 aa11.23□□□□□ -0.61
NOD1-206ENST00000434755 TPCN2Q8NHX9 752 aa11.23□□□□□ -0.61
NOD1-206ENST00000434755 NKX2-3Q8TAU0 364 aa11.23□□□□□ -0.61
NOD1-206ENST00000434755 CGRRF1Q99675 332 aa11.23□□□□□ -0.61
NOD1-206ENST00000434755 FRMD8P1Q9BZ68 369 aaPredicted RBP11.23□□□□□ -0.61
NOD1-206ENST00000434755 NIF3L1Q9GZT8 377 aa11.23□□□□□ -0.61
NOD1-206ENST00000434755 KIF9Q9HAQ2 790 aa11.23□□□□□ -0.61
NOD1-206ENST00000434755 PSD3Q9NYI0 1048 aa11.23□□□□□ -0.61
NOD1-206ENST00000434755 MROH7Q68CQ1 1323 aa11.23□□□□□ -0.61
NOD1-206ENST00000434755 PI4K2BG5E9Z4 385 aa11.23□□□□□ -0.61
NOD1-206ENST00000434755 SOCS7O14512 581 aa11.23□□□□□ -0.61
NOD1-206ENST00000434755 PARNO95453 639 aaKnown RBP11.23□□□□□ -0.61
NOD1-206ENST00000434755 MAPRE1Q15691 268 aaKnown RBP11.23□□□□□ -0.61
NOD1-206ENST00000434755 ARL13BQ3SXY8 428 aa11.23□□□□□ -0.61
NOD1-206ENST00000434755 ARHGEF18Q6ZSZ5 1173 aa11.23□□□□□ -0.61
NOD1-206ENST00000434755 GCNAQ96QF7 691 aa11.23□□□□□ -0.61
NOD1-206ENST00000434755 CBWD1Q9BRT8 395 aa11.23□□□□□ -0.61
NOD1-206ENST00000434755 CCDC68Q9H2F9 335 aa11.23□□□□□ -0.61
NOD1-206ENST00000434755 KANSL3Q9P2N6 904 aa11.23□□□□□ -0.61
NOD1-206ENST00000434755 AKAP11Q9UKA4 1901 aa11.22□□□□□ -0.61
NOD1-206ENST00000434755 A0A087X0T9 212 aa11.22□□□□□ -0.61
NOD1-206ENST00000434755 GOLGA8MH3BSY2 632 aa11.22□□□□□ -0.61
NOD1-206ENST00000434755 ZBTB24O43167 697 aaPredicted RBP11.22□□□□□ -0.61
NOD1-206ENST00000434755 HLA-DRAP01903 254 aa11.22□□□□□ -0.61
NOD1-206ENST00000434755 FAM228BP0C875 321 aa11.22□□□□□ -0.61
NOD1-206ENST00000434755 ATN1P54259 1190 aaPredicted RBP11.22□□□□□ -0.61
NOD1-206ENST00000434755 VSNL1P62760 191 aa11.22□□□□□ -0.61
NOD1-206ENST00000434755 CBWD2Q8IUF1 395 aa11.22□□□□□ -0.61
NOD1-206ENST00000434755 CYP3A43Q9HB55 503 aa11.22□□□□□ -0.61
NOD1-206ENST00000434755 AAASQ9NRG9 546 aa11.22□□□□□ -0.61
NOD1-206ENST00000434755 BTBD7Q9P203 1132 aa11.22□□□□□ -0.61
NOD1-206ENST00000434755 FAN1Q9Y2M0 1017 aa11.22□□□□□ -0.61
NOD1-206ENST00000434755 PRG3Q9Y2Y8 225 aaPredicted RBP11.22□□□□□ -0.61
NOD1-206ENST00000434755 TRIM17Q9Y577 477 aa11.22□□□□□ -0.61
NOD1-206ENST00000434755 SDK1Q7Z5N4 2213 aa11.22□□□□□ -0.61
NOD1-206ENST00000434755 INHBAP08476 426 aa11.22□□□□□ -0.61
NOD1-206ENST00000434755 XPAP23025 273 aaPredicted RBP11.22□□□□□ -0.61
NOD1-206ENST00000434755 MAP2K2P36507 400 aa11.22□□□□□ -0.61
NOD1-206ENST00000434755 ADCYAP1R1P41586 468 aa11.22□□□□□ -0.61
NOD1-206ENST00000434755 PIGHQ14442 188 aaPredicted RBP11.22□□□□□ -0.61
NOD1-206ENST00000434755 C2CD6Q53TS8 623 aa11.22□□□□□ -0.61
NOD1-206ENST00000434755 ANKRD20A3Q5VUR7 823 aa11.22□□□□□ -0.61
NOD1-206ENST00000434755 IFNL1Q8IU54 200 aa11.22□□□□□ -0.61
NOD1-206ENST00000434755 EFCAB13Q8IY85 973 aa11.22□□□□□ -0.61
NOD1-206ENST00000434755 SCYL1Q96KG9 808 aa11.22□□□□□ -0.61
NOD1-206ENST00000434755 KLHL11Q9NVR0 708 aa11.22□□□□□ -0.61
NOD1-206ENST00000434755 STAP1Q9ULZ2 295 aa11.22□□□□□ -0.61
NOD1-206ENST00000434755 TRPV2Q9Y5S1 764 aa11.22□□□□□ -0.61
NOD1-206ENST00000434755 LAMA4Q16363 1823 aa11.22□□□□□ -0.61
NOD1-206ENST00000434755 RPTORQ8N122 1335 aa11.22□□□□□ -0.61
NOD1-206ENST00000434755 PHF2O75151 1096 aa11.22□□□□□ -0.61
NOD1-206ENST00000434755 DUSP11O75319 330 aaKnown RBP11.22□□□□□ -0.61
NOD1-206ENST00000434755 LCP1P13796 627 aa11.22□□□□□ -0.61
NOD1-206ENST00000434755 CYP24A1Q07973 514 aa11.22□□□□□ -0.61
NOD1-206ENST00000434755 ACAD10Q6JQN1 1059 aa11.22□□□□□ -0.61
NOD1-206ENST00000434755 IRF2BP1Q8IU81 584 aa11.22□□□□□ -0.61
NOD1-206ENST00000434755 GSPT2Q8IYD1 628 aaKnown RBP11.22□□□□□ -0.61
NOD1-206ENST00000434755 RCOR2Q8IZ40 523 aa11.22□□□□□ -0.61
NOD1-206ENST00000434755 PPP2R3CQ969Q6 453 aa11.22□□□□□ -0.61
NOD1-206ENST00000434755 VCPIP1Q96JH7 1222 aa11.22□□□□□ -0.61
NOD1-206ENST00000434755 LBHD1Q9BQE6 289 aaPredicted RBP11.22□□□□□ -0.61
NOD1-206ENST00000434755 MYH1P12882 1939 aa11.21□□□□□ -0.61
NOD1-206ENST00000434755 LSM8O95777 96 aaKnown RBP11.21□□□□□ -0.61
NOD1-206ENST00000434755 VTNP04004 478 aa11.21□□□□□ -0.61
NOD1-206ENST00000434755 PSMD6Q15008 389 aa11.21□□□□□ -0.61
NOD1-206ENST00000434755 PAN2Q504Q3 1202 aaKnown RBP11.21□□□□□ -0.61
NOD1-206ENST00000434755 ABHD15Q6UXT9 468 aa11.21□□□□□ -0.61
NOD1-206ENST00000434755 SDCCAG8Q86SQ7 713 aaPredicted RBP11.21□□□□□ -0.61
NOD1-206ENST00000434755 CCDC60Q8IWA6 550 aaPredicted RBP11.21□□□□□ -0.61
NOD1-206ENST00000434755 VPS52Q8N1B4 723 aa11.21□□□□□ -0.61
NOD1-206ENST00000434755 BBS5Q8N3I7 341 aa11.21□□□□□ -0.61
NOD1-206ENST00000434755 BRI3BPQ8WY22 251 aa11.21□□□□□ -0.61
NOD1-206ENST00000434755 EGFRP00533 1210 aa11.21□□□□□ -0.61
NOD1-206ENST00000434755 CENPCQ03188 943 aa11.21□□□□□ -0.61
NOD1-206ENST00000434755 ELAVL2Q12926 359 aaKnown RBP11.21□□□□□ -0.61
NOD1-206ENST00000434755 SEPT6Q14141 434 aa11.21□□□□□ -0.61
NOD1-206ENST00000434755 ZKSCAN8Q15776 578 aaPredicted RBP11.21□□□□□ -0.61
NOD1-206ENST00000434755 MEI1Q5TIA1 1274 aa11.21□□□□□ -0.61
NOD1-206ENST00000434755 GKAP1Q5VSY0 366 aaPredicted RBP11.21□□□□□ -0.61
NOD1-206ENST00000434755 TMEM139Q8IV31 216 aa11.21□□□□□ -0.61
NOD1-206ENST00000434755 APPL2Q8NEU8 664 aa11.21□□□□□ -0.61
NOD1-206ENST00000434755 BCAS4Q8TDM0 211 aa11.21□□□□□ -0.61
NOD1-206ENST00000434755 TRAPPC12Q8WVT3 735 aa11.21□□□□□ -0.61
NOD1-206ENST00000434755 PPM1EQ8WY54 764 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms