RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 CNOT7Q9UIV1 285 aaKnown RBP13.39□□□□□ -0.27
PPP4R1-202ENST00000400555 EXTL3O43909 919 aa13.39□□□□□ -0.27
PPP4R1-202ENST00000400555 RASSF9O75901 435 aa13.39□□□□□ -0.27
PPP4R1-202ENST00000400555 ALDH5A1P51649 535 aaPredicted RBP13.39□□□□□ -0.27
PPP4R1-202ENST00000400555 FAXCQ5TGI0 409 aa13.39□□□□□ -0.27
PPP4R1-202ENST00000400555 RNF149Q8NC42 400 aa13.39□□□□□ -0.27
PPP4R1-202ENST00000400555 FEZF2Q8TBJ5 459 aa13.39□□□□□ -0.27
PPP4R1-202ENST00000400555 TRAPPC12Q8WVT3 735 aa13.39□□□□□ -0.27
PPP4R1-202ENST00000400555 PSPC1Q8WXF1 523 aaKnown RBP13.39□□□□□ -0.27
PPP4R1-202ENST00000400555 WHRNQ9P202 907 aa13.39□□□□□ -0.27
PPP4R1-202ENST00000400555 HAO1Q9UJM8 370 aa13.39□□□□□ -0.27
PPP4R1-202ENST00000400555 CNTNAP1P78357 1384 aa13.39□□□□□ -0.27
PPP4R1-202ENST00000400555 ATP6V1G2O95670 118 aa13.39□□□□□ -0.27
PPP4R1-202ENST00000400555 GAD2Q05329 585 aa13.39□□□□□ -0.27
PPP4R1-202ENST00000400555 MYBPC2Q14324 1141 aa13.39□□□□□ -0.27
PPP4R1-202ENST00000400555 NFIL3Q16649 462 aa13.39□□□□□ -0.27
PPP4R1-202ENST00000400555 ANKS1BQ7Z6G8 1248 aa13.39□□□□□ -0.27
PPP4R1-202ENST00000400555 MICAL1Q8TDZ2 1067 aa13.39□□□□□ -0.27
PPP4R1-202ENST00000400555 KDM4CQ9H3R0 1056 aa13.39□□□□□ -0.27
PPP4R1-202ENST00000400555 NPHS2Q9NP85 383 aa13.39□□□□□ -0.27
PPP4R1-202ENST00000400555 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.39□□□□□ -0.275e-13■■□□□ 11.6
PPP4R1-202ENST00000400555 ATP11AP98196 1134 aa13.39□□□□□ -0.27
PPP4R1-202ENST00000400555 TTLL12Q14166 644 aaPredicted RBP13.39□□□□□ -0.27
PPP4R1-202ENST00000400555 SIX1Q15475 284 aaPredicted RBP13.39□□□□□ -0.27
PPP4R1-202ENST00000400555 CD101Q93033 1021 aa13.39□□□□□ -0.27
PPP4R1-202ENST00000400555 CFAP57Q96MR6 1250 aa13.39□□□□□ -0.27
PPP4R1-202ENST00000400555 SERPINB12Q96P63 405 aa13.39□□□□□ -0.27
PPP4R1-202ENST00000400555 TXLNGYQ9BZA5 131 aa13.39□□□□□ -0.27
PPP4R1-202ENST00000400555 ARL2BPQ9Y2Y0 163 aa13.39□□□□□ -0.27
PPP4R1-202ENST00000400555 A0A1W2PPM1 405 aa13.38□□□□□ -0.27
PPP4R1-202ENST00000400555 TTLL13PA6NNM8 815 aa13.38□□□□□ -0.27
PPP4R1-202ENST00000400555 CST8O60676 142 aa13.38□□□□□ -0.27
PPP4R1-202ENST00000400555 UPP2O95045 317 aa13.38□□□□□ -0.27
PPP4R1-202ENST00000400555 TJP3O95049 919 aa13.38□□□□□ -0.27
PPP4R1-202ENST00000400555 MUTP22033 750 aa13.38□□□□□ -0.27
PPP4R1-202ENST00000400555 TNFAIP1Q13829 316 aa13.38□□□□□ -0.27
PPP4R1-202ENST00000400555 WDR72Q3MJ13 1102 aa13.38□□□□□ -0.27
PPP4R1-202ENST00000400555 VSTM1Q6UX27 236 aa13.38□□□□□ -0.27
PPP4R1-202ENST00000400555 DEFB132Q7Z7B7 95 aa13.38□□□□□ -0.27
PPP4R1-202ENST00000400555 VSIG10LQ86VR7 867 aa13.38□□□□□ -0.27
PPP4R1-202ENST00000400555 KCTD17Q8N5Z5 321 aa13.38□□□□□ -0.27
PPP4R1-202ENST00000400555 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.38□□□□□ -0.27
PPP4R1-202ENST00000400555 DDX1Q92499 740 aaKnown RBP13.38□□□□□ -0.27
PPP4R1-202ENST00000400555 SENP7Q9BQF6 1050 aa13.38□□□□□ -0.27
PPP4R1-202ENST00000400555 STRA6Q9BX79 667 aa13.38□□□□□ -0.27
PPP4R1-202ENST00000400555 MAK16Q9BXY0 300 aaKnown RBP13.38□□□□□ -0.27
PPP4R1-202ENST00000400555 PARVAQ9NVD7 372 aa13.38□□□□□ -0.27
PPP4R1-202ENST00000400555 TJP2Q9UDY2 1190 aa13.38□□□□□ -0.27
PPP4R1-202ENST00000400555 HACL1Q9UJ83 578 aa13.38□□□□□ -0.27
PPP4R1-202ENST00000400555 EFTUD2Q15029 972 aaKnown RBP eCLIP13.38□□□□□ -0.272e-6■■■□□ 18.8
PPP4R1-202ENST00000400555 ABRAQ8N0Z2 381 aa13.38□□□□□ -0.27
PPP4R1-202ENST00000400555 CEP120Q8N960 986 aa13.38□□□□□ -0.27
PPP4R1-202ENST00000400555 KCTD6Q8NC69 237 aa13.38□□□□□ -0.27
PPP4R1-202ENST00000400555 NSMCE1Q8WV22 266 aa13.38□□□□□ -0.27
PPP4R1-202ENST00000400555 TTC17Q96AE7 1141 aa13.38□□□□□ -0.27
PPP4R1-202ENST00000400555 DDX27Q96GQ7 796 aaKnown RBP13.38□□□□□ -0.27
PPP4R1-202ENST00000400555 HEY1Q9Y5J3 304 aa13.38□□□□□ -0.27
PPP4R1-202ENST00000400555 ATRNL1Q5VV63 1379 aa13.38□□□□□ -0.27
PPP4R1-202ENST00000400555 DKC1O60832 514 aaKnown RBP eCLIP13.38□□□□□ -0.27
PPP4R1-202ENST00000400555 PSMC1P62191 440 aaKnown RBP13.38□□□□□ -0.27
PPP4R1-202ENST00000400555 PPP1R21Q6ZMI0 780 aa13.38□□□□□ -0.27
PPP4R1-202ENST00000400555 FITM2Q8N6M3 262 aa13.38□□□□□ -0.27
PPP4R1-202ENST00000400555 TMC2Q8TDI7 906 aa13.38□□□□□ -0.27
PPP4R1-202ENST00000400555 PPP1R13LQ8WUF5 828 aa13.38□□□□□ -0.27
PPP4R1-202ENST00000400555 LPAR1Q92633 364 aa13.38□□□□□ -0.27
PPP4R1-202ENST00000400555 TRIM11Q96F44 468 aa13.38□□□□□ -0.27
PPP4R1-202ENST00000400555 RSRC1Q96IZ7 334 aaKnown RBP13.38□□□□□ -0.27
PPP4R1-202ENST00000400555 RREB1Q92766 1687 aa13.37□□□□□ -0.27
PPP4R1-202ENST00000400555 SBF2Q86WG5 1849 aa13.37□□□□□ -0.27
PPP4R1-202ENST00000400555 ZNF541Q9H0D2 1346 aa13.37□□□□□ -0.27
PPP4R1-202ENST00000400555 FAM47DPA6NHR8 397 aa13.37□□□□□ -0.27
PPP4R1-202ENST00000400555 H7C0C1 242 aa13.37□□□□□ -0.27
PPP4R1-202ENST00000400555 ASAP2O43150 1006 aa13.37□□□□□ -0.27
PPP4R1-202ENST00000400555 KRT16P08779 473 aa13.37□□□□□ -0.27
PPP4R1-202ENST00000400555 KRT4P19013 534 aa13.37□□□□□ -0.27
PPP4R1-202ENST00000400555 ATP5OP48047 213 aa13.37□□□□□ -0.27
PPP4R1-202ENST00000400555 XKR3Q5GH77 459 aa13.37□□□□□ -0.27
PPP4R1-202ENST00000400555 C1orf228Q6PIY5 440 aa13.37□□□□□ -0.27
PPP4R1-202ENST00000400555 AGAP11Q8TF27 550 aa13.37□□□□□ -0.27
PPP4R1-202ENST00000400555 PRPF31Q8WWY3 499 aaKnown RBP13.37□□□□□ -0.27
PPP4R1-202ENST00000400555 CFAP36Q96G28 342 aa13.37□□□□□ -0.27
PPP4R1-202ENST00000400555 ROPN1BQ9BZX4 212 aaPredicted RBP13.37□□□□□ -0.27
PPP4R1-202ENST00000400555 ROPN1Q9HAT0 212 aaPredicted RBP13.37□□□□□ -0.27
PPP4R1-202ENST00000400555 A1CFQ9NQ94 594 aaKnown RBP13.37□□□□□ -0.27
PPP4R1-202ENST00000400555 CHMP2BQ9UQN3 213 aa13.37□□□□□ -0.27
PPP4R1-202ENST00000400555 MYPNQ86TC9 1320 aa13.37□□□□□ -0.27
PPP4R1-202ENST00000400555 ALDH3A1P30838 453 aa13.37□□□□□ -0.27
PPP4R1-202ENST00000400555 SLC8A1P32418 973 aa13.37□□□□□ -0.27
PPP4R1-202ENST00000400555 MAN1A1P33908 653 aa13.37□□□□□ -0.27
PPP4R1-202ENST00000400555 ZNF699Q32M78 642 aa13.37□□□□□ -0.27
PPP4R1-202ENST00000400555 B3GNT9Q6UX72 402 aa13.37□□□□□ -0.27
PPP4R1-202ENST00000400555 GADL1Q6ZQY3 521 aa13.37□□□□□ -0.27
PPP4R1-202ENST00000400555 FAM71DQ8N9W8 422 aa13.37□□□□□ -0.27
PPP4R1-202ENST00000400555 UBA3Q8TBC4 463 aa13.37□□□□□ -0.27
PPP4R1-202ENST00000400555 MFSD14AQ96MC6 490 aa13.37□□□□□ -0.27
PPP4R1-202ENST00000400555 IQCGQ9H095 443 aaKnown RBP13.37□□□□□ -0.27
PPP4R1-202ENST00000400555 MAGED2Q9UNF1 606 aaPredicted RBP13.37□□□□□ -0.27
PPP4R1-202ENST00000400555 NPM3O75607 178 aaKnown RBP13.37□□□□□ -0.27
PPP4R1-202ENST00000400555 ANP32DO95626 131 aa13.37□□□□□ -0.27
PPP4R1-202ENST00000400555 NQO1P15559 274 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms