RNA–Protein interactions for RNA: ENST00000396027.8

XRCC4-203, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene XRCC4, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-203ENST00000396027 PGBD4Q96DM1 585 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 COX4I2Q96KJ9 171 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 ZNF570Q96NI8 536 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 NEUROD6Q96NK8 337 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 BIRC8Q96P09 236 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 RPRD1AQ96P16 312 aaPredicted RBP3.82□□□□□ -1.8
XRCC4-203ENST00000396027 SORCS2Q96PQ0 1159 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 SECISBP2Q96T21 854 aaKnown RBP3.82□□□□□ -1.8
XRCC4-203ENST00000396027 SEC62Q99442 399 aaKnown RBP3.82□□□□□ -1.8
XRCC4-203ENST00000396027 DHRS9Q9BPW9 319 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 ISCA1Q9BUE6 129 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 KIFC3Q9BVG8 833 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 MRPL1Q9BYD6 325 aaKnown RBP3.82□□□□□ -1.8
XRCC4-203ENST00000396027 TRIM15Q9C019 465 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 DDX47Q9H0S4 455 aaKnown RBP3.82□□□□□ -1.8
XRCC4-203ENST00000396027 TMEM168Q9H0V1 697 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 VPS33BQ9H267 617 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 TAF1DQ9H5J8 278 aaPredicted RBP3.82□□□□□ -1.8
XRCC4-203ENST00000396027 CCDC134Q9H6E4 229 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 ELP3Q9H9T3 547 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 PLGRKTQ9HBL7 147 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 XAB2Q9HCS7 855 aaKnown RBP3.82□□□□□ -1.8
XRCC4-203ENST00000396027 GPR108Q9NPR9 543 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 PFDN4Q9NQP4 134 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 C8orf4Q9NR00 106 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 ZNF277Q9NRM2 450 aaPredicted RBP3.82□□□□□ -1.8
XRCC4-203ENST00000396027 STMN3Q9NZ72 180 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 MOCS1Q9NZB8 636 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 DLGAP2Q9P1A6 1054 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 KIAA1522Q9P206 1035 aaPredicted RBP3.82□□□□□ -1.8
XRCC4-203ENST00000396027 ZNF212Q9UDV6 495 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 EXOC7Q9UPT5 735 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 CFL2Q9Y281 166 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 ATP7BP35670 1465 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 ERCC6Q03468 1493 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 WDR7Q9Y4E6 1490 aa3.82□□□□□ -1.8
XRCC4-203ENST00000396027 CEMIPQ8WUJ3 1361 aa3.81□□□□□ -1.8
XRCC4-203ENST00000396027 JCADQ9P266 1359 aa3.81□□□□□ -1.8
XRCC4-203ENST00000396027 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.81□□□□□ -1.8
XRCC4-203ENST00000396027 A0A0B4J203 849 aa3.81□□□□□ -1.8
XRCC4-203ENST00000396027 A0A0J9YVX5 310 aa3.81□□□□□ -1.8
XRCC4-203ENST00000396027 SNTNA6NMZ2 147 aa3.81□□□□□ -1.8
XRCC4-203ENST00000396027 A8MXQ7 604 aa3.81□□□□□ -1.8
XRCC4-203ENST00000396027 RSPH10B2B2RC85 870 aa3.81□□□□□ -1.8
XRCC4-203ENST00000396027 KIF28PB7ZC32 967 aa3.81□□□□□ -1.8
XRCC4-203ENST00000396027 H0Y3Z8 333 aa3.81□□□□□ -1.8
XRCC4-203ENST00000396027 AP1G1O43747 822 aa3.81□□□□□ -1.8
XRCC4-203ENST00000396027 ECE2O60344 883 aa3.81□□□□□ -1.8
XRCC4-203ENST00000396027 TRIM13O60858 407 aa3.81□□□□□ -1.8
XRCC4-203ENST00000396027 PHACTR2O75167 634 aa3.81□□□□□ -1.8
XRCC4-203ENST00000396027 MAFO75444 373 aaPredicted RBP3.81□□□□□ -1.8
XRCC4-203ENST00000396027 JRKO75564 520 aa3.81□□□□□ -1.8
XRCC4-203ENST00000396027 SERPINB7O75635 380 aa3.81□□□□□ -1.8
XRCC4-203ENST00000396027 DDHD2O94830 711 aa3.81□□□□□ -1.8
XRCC4-203ENST00000396027 SUN1O94901 812 aa3.81□□□□□ -1.8
XRCC4-203ENST00000396027 DLGAP3O95886 979 aa3.81□□□□□ -1.8
XRCC4-203ENST00000396027 ASS1P00966 412 aaKnown RBP3.81□□□□□ -1.8
XRCC4-203ENST00000396027 RSPH10BP0C881 870 aa3.81□□□□□ -1.8
XRCC4-203ENST00000396027 PDHBP11177 359 aa3.81□□□□□ -1.8
XRCC4-203ENST00000396027 PCNAP12004 261 aa3.81□□□□□ -1.8
XRCC4-203ENST00000396027 ALAS1P13196 640 aa3.81□□□□□ -1.8
XRCC4-203ENST00000396027 ZNF3P17036 446 aa3.81□□□□□ -1.8
XRCC4-203ENST00000396027 CFL1P23528 166 aaKnown RBP3.81□□□□□ -1.8
XRCC4-203ENST00000396027 NFKBIAP25963 317 aa3.81□□□□□ -1.8
XRCC4-203ENST00000396027 CTNNA2P26232 953 aa3.81□□□□□ -1.8
XRCC4-203ENST00000396027 TTKP33981 857 aa3.81□□□□□ -1.8
XRCC4-203ENST00000396027 MSH2P43246 934 aa3.81□□□□□ -1.8
XRCC4-203ENST00000396027 CDK7P50613 346 aa3.81□□□□□ -1.8
XRCC4-203ENST00000396027 HNRNPMP52272 730 aaKnown RBP eCLIP3.81□□□□□ -1.8
XRCC4-203ENST00000396027 ADKP55263 362 aaKnown RBP3.81□□□□□ -1.8
XRCC4-203ENST00000396027 KIF23Q02241 960 aaPredicted RBP3.81□□□□□ -1.8
XRCC4-203ENST00000396027 CHRNEQ04844 493 aa3.81□□□□□ -1.8
XRCC4-203ENST00000396027 RAD51Q06609 339 aa3.81□□□□□ -1.8
XRCC4-203ENST00000396027 FCHO2Q0JRZ9 810 aa3.81□□□□□ -1.8
XRCC4-203ENST00000396027 IKZF1Q13422 519 aa3.81□□□□□ -1.8
XRCC4-203ENST00000396027 ADAM9Q13443 819 aa3.81□□□□□ -1.8
XRCC4-203ENST00000396027 PDE1CQ14123 709 aaPredicted RBP3.81□□□□□ -1.8
XRCC4-203ENST00000396027 CLUL1Q15846 466 aa3.81□□□□□ -1.8
XRCC4-203ENST00000396027 PPP2R5EQ16537 467 aa3.81□□□□□ -1.8
XRCC4-203ENST00000396027 GEN1Q17RS7 908 aa3.81□□□□□ -1.8
XRCC4-203ENST00000396027 LETM2Q2VYF4 491 aa3.81□□□□□ -1.8
XRCC4-203ENST00000396027 ZC2HC1CQ53FD0 456 aaPredicted RBP3.81□□□□□ -1.8
XRCC4-203ENST00000396027 AARS2Q5JTZ9 985 aaKnown RBP3.81□□□□□ -1.8
XRCC4-203ENST00000396027 HP1BP3Q5SSJ5 553 aaPredicted RBP3.81□□□□□ -1.8
XRCC4-203ENST00000396027 ANO7Q6IWH7 933 aa3.81□□□□□ -1.8
XRCC4-203ENST00000396027 ALKBH2Q6NS38 261 aa3.81□□□□□ -1.8
XRCC4-203ENST00000396027 NIPAL1Q6NVV3 410 aa3.81□□□□□ -1.8
XRCC4-203ENST00000396027 FAM171BQ6P995 826 aa3.81□□□□□ -1.8
XRCC4-203ENST00000396027 FIP1L1Q6UN15 594 aaKnown RBP3.81□□□□□ -1.8
XRCC4-203ENST00000396027 SLC30A10Q6XR72 485 aa3.81□□□□□ -1.8
XRCC4-203ENST00000396027 MARK2Q7KZI7 788 aaKnown RBP3.81□□□□□ -1.8
XRCC4-203ENST00000396027 RASGRP2Q7LDG7 609 aa3.81□□□□□ -1.8
XRCC4-203ENST00000396027 TRPM8Q7Z2W7 1104 aa3.81□□□□□ -1.8
XRCC4-203ENST00000396027 ZNF438Q7Z4V0 828 aa3.81□□□□□ -1.8
XRCC4-203ENST00000396027 TMTC1Q8IUR5 882 aa3.81□□□□□ -1.8
XRCC4-203ENST00000396027 TSPYL6Q8N831 410 aa3.81□□□□□ -1.8
XRCC4-203ENST00000396027 LSMEM1Q8N8F7 131 aa3.81□□□□□ -1.8
XRCC4-203ENST00000396027 SPATA5Q8NB90 893 aa3.81□□□□□ -1.8
XRCC4-203ENST00000396027 APPL2Q8NEU8 664 aa3.81□□□□□ -1.8
XRCC4-203ENST00000396027 LINS1Q8NG48 757 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms