RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 SDHBP21912 280 aa14.99□□□□□ -0.01
CXCL12-202ENST00000374426 EPHB3P54753 998 aa14.99□□□□□ -0.01
CXCL12-202ENST00000374426 MLLT6P55198 1093 aaPredicted RBP14.99□□□□□ -0.01
CXCL12-202ENST00000374426 ARHGAP8P85298 464 aa14.99□□□□□ -0.01
CXCL12-202ENST00000374426 SATB1Q01826 763 aa14.99□□□□□ -0.01
CXCL12-202ENST00000374426 PPP2R3AQ06190 1150 aa14.99□□□□□ -0.01
CXCL12-202ENST00000374426 FCHO2Q0JRZ9 810 aa14.99□□□□□ -0.01
CXCL12-202ENST00000374426 PLD1Q13393 1074 aa14.99□□□□□ -0.01
CXCL12-202ENST00000374426 PPP2R5DQ14738 602 aa14.99□□□□□ -0.01
CXCL12-202ENST00000374426 LPAL2Q16609 132 aa14.99□□□□□ -0.01
CXCL12-202ENST00000374426 WDR44Q5JSH3 913 aa14.99□□□□□ -0.01
CXCL12-202ENST00000374426 MCTP1Q6DN14 999 aa14.99□□□□□ -0.01
CXCL12-202ENST00000374426 CENPPQ6IPU0 288 aa14.99□□□□□ -0.01
CXCL12-202ENST00000374426 DSTYKQ6XUX3 929 aa14.99□□□□□ -0.01
CXCL12-202ENST00000374426 TTC9BQ8N6N2 239 aa14.99□□□□□ -0.01
CXCL12-202ENST00000374426 ATAD1Q8NBU5 361 aa14.99□□□□□ -0.01
CXCL12-202ENST00000374426 E2F7Q96AV8 911 aa14.99□□□□□ -0.01
CXCL12-202ENST00000374426 LRRC3BQ96PB8 259 aa14.99□□□□□ -0.01
CXCL12-202ENST00000374426 MKNK1Q9BUB5 465 aa14.99□□□□□ -0.01
CXCL12-202ENST00000374426 LARSQ9P2J5 1176 aaKnown RBP14.99□□□□□ -0.01
CXCL12-202ENST00000374426 GMEB2Q9UKD1 530 aa14.99□□□□□ -0.01
CXCL12-202ENST00000374426 USP18Q9UMW8 372 aa14.99□□□□□ -0.01
CXCL12-202ENST00000374426 SLC27A5Q9Y2P5 690 aa14.99□□□□□ -0.01
CXCL12-202ENST00000374426 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.99□□□□□ -0.01
CXCL12-202ENST00000374426 KMT2BQ9UMN6 2715 aaPredicted RBP14.99□□□□□ -0.01
CXCL12-202ENST00000374426 MTMR11A4FU01 709 aa14.98□□□□□ -0.01
CXCL12-202ENST00000374426 SLC38A8A6NNN8 435 aa14.98□□□□□ -0.01
CXCL12-202ENST00000374426 H0YCG3 227 aa14.98□□□□□ -0.01
CXCL12-202ENST00000374426 HNRNPDLO14979 420 aaKnown RBP14.98□□□□□ -0.01
CXCL12-202ENST00000374426 CHADO15335 359 aa14.98□□□□□ -0.01
CXCL12-202ENST00000374426 ADRB2P07550 413 aa14.98□□□□□ -0.01
CXCL12-202ENST00000374426 TYMPP19971 482 aa14.98□□□□□ -0.01
CXCL12-202ENST00000374426 ALDH1A3P47895 512 aa14.98□□□□□ -0.01
CXCL12-202ENST00000374426 CXCL12P48061 93 aa14.98□□□□□ -0.01
CXCL12-202ENST00000374426 SOX9P48436 509 aa14.98□□□□□ -0.01
CXCL12-202ENST00000374426 LIG4P49917 911 aa14.98□□□□□ -0.01
CXCL12-202ENST00000374426 MYBPC2Q14324 1141 aa14.98□□□□□ -0.01
CXCL12-202ENST00000374426 OVOS1Q6IE37 1185 aa14.98□□□□□ -0.01
CXCL12-202ENST00000374426 GAREM2Q75VX8 874 aa14.98□□□□□ -0.01
CXCL12-202ENST00000374426 GPIHBP1Q8IV16 184 aa14.98□□□□□ -0.01
CXCL12-202ENST00000374426 ARID3BQ8IVW6 561 aaPredicted RBP14.98□□□□□ -0.01
CXCL12-202ENST00000374426 CELF5Q8N6W0 485 aaKnown RBP14.98□□□□□ -0.01
CXCL12-202ENST00000374426 LRRC15Q8TF66 581 aa14.98□□□□□ -0.01
CXCL12-202ENST00000374426 CDK5RAP3Q96JB5 506 aa14.98□□□□□ -0.01
CXCL12-202ENST00000374426 TMEM209Q96SK2 561 aa14.98□□□□□ -0.01
CXCL12-202ENST00000374426 REEP2Q9BRK0 252 aa14.98□□□□□ -0.01
CXCL12-202ENST00000374426 RBM12Q9NTZ6 932 aaKnown RBP14.98□□□□□ -0.01
CXCL12-202ENST00000374426 CDV3Q9UKY7 258 aaKnown RBP14.98□□□□□ -0.01
CXCL12-202ENST00000374426 TBX20Q9UMR3 447 aa14.98□□□□□ -0.01
CXCL12-202ENST00000374426 CNOT1A5YKK6 2376 aaKnown RBP14.98□□□□□ -0.01
CXCL12-202ENST00000374426 OGTO15294 1046 aa14.97□□□□□ -0.01
CXCL12-202ENST00000374426 XPOTO43592 962 aaKnown RBP14.97□□□□□ -0.01
CXCL12-202ENST00000374426 SOAT2O75908 522 aa14.97□□□□□ -0.01
CXCL12-202ENST00000374426 PIGRP01833 764 aa14.97□□□□□ -0.01
CXCL12-202ENST00000374426 LILRA4P59901 499 aa14.97□□□□□ -0.01
CXCL12-202ENST00000374426 DMWDQ09019 674 aa14.97□□□□□ -0.01
CXCL12-202ENST00000374426 KYAT1Q16773 422 aa14.97□□□□□ -0.01
CXCL12-202ENST00000374426 SPATA1Q5VX52 437 aa14.97□□□□□ -0.01
CXCL12-202ENST00000374426 ARL6IP4Q66PJ3 421 aaKnown RBP14.97□□□□□ -0.01
CXCL12-202ENST00000374426 LAIR1Q6GTX8 287 aa14.97□□□□□ -0.01
CXCL12-202ENST00000374426 TXNDC11Q6PKC3 985 aa14.97□□□□□ -0.01
CXCL12-202ENST00000374426 DNAJB7Q7Z6W7 309 aaPredicted RBP14.97□□□□□ -0.01
CXCL12-202ENST00000374426 YAF2Q8IY57 180 aa14.97□□□□□ -0.01
CXCL12-202ENST00000374426 SPEM1Q8N4L4 309 aa14.97□□□□□ -0.01
CXCL12-202ENST00000374426 CSGALNACT1Q8TDX6 532 aa14.97□□□□□ -0.01
CXCL12-202ENST00000374426 PSMG2Q969U7 264 aa14.97□□□□□ -0.01
CXCL12-202ENST00000374426 MSANTD3Q96H12 275 aa14.97□□□□□ -0.01
CXCL12-202ENST00000374426 SENP8Q96LD8 212 aa14.97□□□□□ -0.01
CXCL12-202ENST00000374426 C8orf33Q9H7E9 229 aaPredicted RBP14.97□□□□□ -0.01
CXCL12-202ENST00000374426 RPF1Q9H9Y2 349 aaKnown RBP14.97□□□□□ -0.01
CXCL12-202ENST00000374426 RAB23Q9ULC3 237 aa14.97□□□□□ -0.01
CXCL12-202ENST00000374426 ODF2LQ9ULJ1 636 aa14.97□□□□□ -0.01
CXCL12-202ENST00000374426 ASB3Q9Y575 518 aa14.97□□□□□ -0.01
CXCL12-202ENST00000374426 SDK1Q7Z5N4 2213 aa14.96□□□□□ -0.01
CXCL12-202ENST00000374426 A0A0B4J269 797 aa14.96□□□□□ -0.01
CXCL12-202ENST00000374426 MYBPHLA2RUH7 354 aa14.96□□□□□ -0.01
CXCL12-202ENST00000374426 SPECC1L-ADORA2AF8WAN1 911 aa14.96□□□□□ -0.01
CXCL12-202ENST00000374426 K7ESF4 209 aa14.96□□□□□ -0.01
CXCL12-202ENST00000374426 ODC1P11926 461 aa14.96□□□□□ -0.01
CXCL12-202ENST00000374426 CTHP32929 405 aa14.96□□□□□ -0.01
CXCL12-202ENST00000374426 KPNA1P52294 538 aaPredicted RBP14.96□□□□□ -0.01
CXCL12-202ENST00000374426 ZNF131P52739 623 aa14.96□□□□□ -0.01
CXCL12-202ENST00000374426 SPEM2Q0P670 501 aa14.96□□□□□ -0.01
CXCL12-202ENST00000374426 JADE1Q6IE81 842 aa14.96□□□□□ -0.01
CXCL12-202ENST00000374426 SLC39A4Q6P5W5 647 aa14.96□□□□□ -0.01
CXCL12-202ENST00000374426 C1orf228Q6PIY5 440 aa14.96□□□□□ -0.01
CXCL12-202ENST00000374426 PRR23BQ6ZRT6 265 aa14.96□□□□□ -0.01
CXCL12-202ENST00000374426 Q6ZS52 159 aa14.96□□□□□ -0.01
CXCL12-202ENST00000374426 GPBP1Q86WP2 473 aa14.96□□□□□ -0.01
CXCL12-202ENST00000374426 OR10T2Q8NGX3 314 aa14.96□□□□□ -0.01
CXCL12-202ENST00000374426 ZFYVE19Q96K21 471 aa14.96□□□□□ -0.01
CXCL12-202ENST00000374426 TSPAN18Q96SJ8 248 aa14.96□□□□□ -0.01
CXCL12-202ENST00000374426 ATXN3LQ9H3M9 355 aa14.96□□□□□ -0.01
CXCL12-202ENST00000374426 C2orf42Q9NWW7 574 aa14.96□□□□□ -0.01
CXCL12-202ENST00000374426 CPSF3Q9UKF6 684 aaKnown RBP14.96□□□□□ -0.01
CXCL12-202ENST00000374426 KIF3AQ9Y496 699 aa14.96□□□□□ -0.01
CXCL12-202ENST00000374426 MAP1BP46821 2468 aaKnown RBP14.95□□□□□ -0.02
CXCL12-202ENST00000374426 DCDC2BA2VCK2 349 aa14.95□□□□□ -0.02
CXCL12-202ENST00000374426 CHURC1-FNTBB4DL54 471 aa14.95□□□□□ -0.02
CXCL12-202ENST00000374426 K7ENM7 598 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms