RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 R3HCC1Q9Y3T6 440 aaKnown RBP20.42■□□□□ 0.86
TMEM53-201ENST00000372235 TIMM13Q9Y5L4 95 aaPredicted RBP20.42■□□□□ 0.86
TMEM53-201ENST00000372235 KRBA1A5PL33 1030 aa20.41■□□□□ 0.86
TMEM53-201ENST00000372235 EXTL3O43909 919 aa20.41■□□□□ 0.86
TMEM53-201ENST00000372235 EPHA5P54756 1037 aa20.41■□□□□ 0.86
TMEM53-201ENST00000372235 STARD6P59095 220 aa20.41■□□□□ 0.86
TMEM53-201ENST00000372235 GPC5P78333 572 aa20.41■□□□□ 0.86
TMEM53-201ENST00000372235 PRSS36Q5K4E3 855 aa20.41■□□□□ 0.86
TMEM53-201ENST00000372235 CNNM4Q6P4Q7 775 aa20.41■□□□□ 0.86
TMEM53-201ENST00000372235 CRELD2Q6UXH1 353 aaPredicted RBP20.41■□□□□ 0.86
TMEM53-201ENST00000372235 BRSK2Q8IWQ3 736 aa20.41■□□□□ 0.86
TMEM53-201ENST00000372235 MCRS1Q96EZ8 462 aa20.41■□□□□ 0.86
TMEM53-201ENST00000372235 RBAKQ9NYW8 714 aaPredicted RBP20.41■□□□□ 0.86
TMEM53-201ENST00000372235 TFIP11Q9UBB9 837 aaKnown RBP20.41■□□□□ 0.86
TMEM53-201ENST00000372235 KPNA7A9QM74 516 aa20.4■□□□□ 0.86
TMEM53-201ENST00000372235 H0Y858 1186 aa20.4■□□□□ 0.86
TMEM53-201ENST00000372235 CYB561D2O14569 222 aa20.4■□□□□ 0.86
TMEM53-201ENST00000372235 EIF3DO15371 548 aaKnown RBP eCLIP20.4■□□□□ 0.86
TMEM53-201ENST00000372235 F13A1P00488 732 aa20.4■□□□□ 0.86
TMEM53-201ENST00000372235 MAGEA9P43362 315 aa20.4■□□□□ 0.86
TMEM53-201ENST00000372235 GUCY2FP51841 1108 aa20.4■□□□□ 0.86
TMEM53-201ENST00000372235 SNRPFP62306 86 aaKnown RBP20.4■□□□□ 0.86
TMEM53-201ENST00000372235 SLC5A9Q2M3M2 681 aa20.4■□□□□ 0.86
TMEM53-201ENST00000372235 DTWD2Q8NBA8 298 aa20.4■□□□□ 0.86
TMEM53-201ENST00000372235 ING5Q8WYH8 240 aa20.4■□□□□ 0.86
TMEM53-201ENST00000372235 NELL2Q99435 816 aa20.4■□□□□ 0.86
TMEM53-201ENST00000372235 OSBPL6Q9BZF3 934 aa20.4■□□□□ 0.86
TMEM53-201ENST00000372235 TRIM9Q9C026 710 aa20.4■□□□□ 0.86
TMEM53-201ENST00000372235 ZDBF2Q9HCK1 2354 aa20.4■□□□□ 0.86
TMEM53-201ENST00000372235 ITGA11Q9UKX5 1188 aa20.4■□□□□ 0.86
TMEM53-201ENST00000372235 YIPF1Q9Y548 306 aa20.4■□□□□ 0.86
TMEM53-201ENST00000372235 A0A087X0B3 334 aa20.39■□□□□ 0.85
TMEM53-201ENST00000372235 TISP43B9A030 160 aa20.39■□□□□ 0.85
TMEM53-201ENST00000372235 PROB1E7EW31 1015 aa20.39■□□□□ 0.85
TMEM53-201ENST00000372235 DUSP4Q13115 394 aa20.39■□□□□ 0.85
TMEM53-201ENST00000372235 VEPH1Q14D04 833 aa20.39■□□□□ 0.85
TMEM53-201ENST00000372235 E2F4Q16254 413 aa20.39■□□□□ 0.85
TMEM53-201ENST00000372235 CENPPQ6IPU0 288 aa20.39■□□□□ 0.85
TMEM53-201ENST00000372235 DCP1BQ8IZD4 617 aaKnown RBP20.39■□□□□ 0.85
TMEM53-201ENST00000372235 GPD1LQ8N335 351 aa20.39■□□□□ 0.85
TMEM53-201ENST00000372235 LRRC52Q8N7C0 313 aa20.39■□□□□ 0.85
TMEM53-201ENST00000372235 SPATA18Q8TC71 538 aa20.39■□□□□ 0.85
TMEM53-201ENST00000372235 DNASE1L2Q92874 299 aa20.39■□□□□ 0.85
TMEM53-201ENST00000372235 ZMYM5Q9UJ78 669 aa20.39■□□□□ 0.85
TMEM53-201ENST00000372235 MRPS17Q9Y2R5 130 aaKnown RBP20.39■□□□□ 0.85
TMEM53-201ENST00000372235 UBE4BO95155 1302 aa20.38■□□□□ 0.85
TMEM53-201ENST00000372235 MTMR11A4FU01 709 aa20.38■□□□□ 0.85
TMEM53-201ENST00000372235 NCAM2O15394 837 aa20.38■□□□□ 0.85
TMEM53-201ENST00000372235 CEBPBP17676 345 aa20.38■□□□□ 0.85
TMEM53-201ENST00000372235 ME1P48163 572 aa20.38■□□□□ 0.85
TMEM53-201ENST00000372235 ASIC1P78348 528 aa20.38■□□□□ 0.85
TMEM53-201ENST00000372235 TFAMQ00059 246 aaKnown RBP20.38■□□□□ 0.85
TMEM53-201ENST00000372235 KCNA1Q09470 495 aa20.38■□□□□ 0.85
TMEM53-201ENST00000372235 MLF2Q15773 248 aaPredicted RBP20.38■□□□□ 0.85
TMEM53-201ENST00000372235 SLC44A4Q53GD3 710 aa20.38■□□□□ 0.85
TMEM53-201ENST00000372235 TMEM86AQ8N2M4 240 aa20.38■□□□□ 0.85
TMEM53-201ENST00000372235 SPPL2BQ8TCT7 592 aa20.38■□□□□ 0.85
TMEM53-201ENST00000372235 DEPDC1BQ8WUY9 529 aa20.38■□□□□ 0.85
TMEM53-201ENST00000372235 SMARCD2Q92925 531 aa20.38■□□□□ 0.85
TMEM53-201ENST00000372235 DHX58Q96C10 678 aa20.38■□□□□ 0.85
TMEM53-201ENST00000372235 BORCS6Q96GS4 357 aa20.38■□□□□ 0.85
TMEM53-201ENST00000372235 PGLYRP2Q96PD5 576 aa20.38■□□□□ 0.85
TMEM53-201ENST00000372235 C7orf25Q9BPX7 421 aa20.38■□□□□ 0.85
TMEM53-201ENST00000372235 KXD1Q9BQD3 176 aa20.38■□□□□ 0.85
TMEM53-201ENST00000372235 RPP25Q9BUL9 199 aaKnown RBP20.38■□□□□ 0.85
TMEM53-201ENST00000372235 CEP72Q9P209 647 aa20.38■□□□□ 0.85
TMEM53-201ENST00000372235 KANSL1LA0AUZ9 987 aa20.37■□□□□ 0.85
TMEM53-201ENST00000372235 ZNF233A6NK53 670 aa20.37■□□□□ 0.85
TMEM53-201ENST00000372235 PPEF2O14830 753 aa20.37■□□□□ 0.85
TMEM53-201ENST00000372235 SPTLC1O15269 473 aa20.37■□□□□ 0.85
TMEM53-201ENST00000372235 PI15O43692 258 aa20.37■□□□□ 0.85
TMEM53-201ENST00000372235 MYL4P12829 197 aa20.37■□□□□ 0.85
TMEM53-201ENST00000372235 NBL1P41271 181 aa20.37■□□□□ 0.85
TMEM53-201ENST00000372235 CASP5P51878 434 aa20.37■□□□□ 0.85
TMEM53-201ENST00000372235 RBP5P82980 135 aa20.37■□□□□ 0.85
TMEM53-201ENST00000372235 PJA1Q8NG27 643 aa20.37■□□□□ 0.85
TMEM53-201ENST00000372235 IRF7Q92985 503 aa20.37■□□□□ 0.85
TMEM53-201ENST00000372235 SAAL1Q96ER3 474 aa20.37■□□□□ 0.85
TMEM53-201ENST00000372235 ANKRD36BP1Q96IX9 119 aa20.37■□□□□ 0.85
TMEM53-201ENST00000372235 ASB16Q96NS5 453 aa20.37■□□□□ 0.85
TMEM53-201ENST00000372235 TRMT61BQ9BVS5 477 aaKnown RBP20.37■□□□□ 0.85
TMEM53-201ENST00000372235 ZCWPW1Q9H0M4 648 aa20.37■□□□□ 0.85
TMEM53-201ENST00000372235 TRPV4Q9HBA0 871 aa20.37■□□□□ 0.85
TMEM53-201ENST00000372235 CGNQ9P2M7 1197 aaKnown RBP20.37■□□□□ 0.85
TMEM53-201ENST00000372235 MYH15Q9Y2K3 1946 aa20.37■□□□□ 0.85
TMEM53-201ENST00000372235 HUS1O60921 280 aa20.36■□□□□ 0.85
TMEM53-201ENST00000372235 PRPF6O94906 941 aaKnown RBP20.36■□□□□ 0.85
TMEM53-201ENST00000372235 OR4Q2P0C623 313 aa20.36■□□□□ 0.85
TMEM53-201ENST00000372235 TMEM191BP0C7N4 346 aa20.36■□□□□ 0.85
TMEM53-201ENST00000372235 PSMC3P17980 439 aa20.36■□□□□ 0.85
TMEM53-201ENST00000372235 TSPY1Q01534 308 aa20.36■□□□□ 0.85
TMEM53-201ENST00000372235 MYO1EQ12965 1108 aa20.36■□□□□ 0.85
TMEM53-201ENST00000372235 ANGPT1Q15389 498 aa20.36■□□□□ 0.85
TMEM53-201ENST00000372235 NFE2Q16621 373 aaPredicted RBP20.36■□□□□ 0.85
TMEM53-201ENST00000372235 ARHGAP15Q53QZ3 475 aa20.36■□□□□ 0.85
TMEM53-201ENST00000372235 C1orf228Q6PIY5 440 aa20.36■□□□□ 0.85
TMEM53-201ENST00000372235 SHC4Q6S5L8 630 aa20.36■□□□□ 0.85
TMEM53-201ENST00000372235 EFCAB13Q8IY85 973 aa20.36■□□□□ 0.85
TMEM53-201ENST00000372235 CEP57L1Q8IYX8 460 aa20.36■□□□□ 0.85
TMEM53-201ENST00000372235 PSMG2Q969U7 264 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms