RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 NALCNQ8IZF0 1738 aa6.87□□□□□ -1.31
RNU4-39P-201ENST00000362455 RALGAPBQ86X10 1494 aa6.86□□□□□ -1.31
RNU4-39P-201ENST00000362455 USP19O94966 1318 aa6.86□□□□□ -1.31
RNU4-39P-201ENST00000362455 RHPN2P1A8MT19 583 aa6.86□□□□□ -1.31
RNU4-39P-201ENST00000362455 MATN2O00339 956 aa6.86□□□□□ -1.31
RNU4-39P-201ENST00000362455 B4GALT4O60513 344 aa6.86□□□□□ -1.31
RNU4-39P-201ENST00000362455 SLC7A1P30825 629 aa6.86□□□□□ -1.31
RNU4-39P-201ENST00000362455 RAP1GAPP47736 663 aa6.86□□□□□ -1.31
RNU4-39P-201ENST00000362455 PRIM2P49643 509 aa6.86□□□□□ -1.31
RNU4-39P-201ENST00000362455 FLT3LGP49771 235 aa6.86□□□□□ -1.31
RNU4-39P-201ENST00000362455 NPEPPSP55786 919 aa6.86□□□□□ -1.31
RNU4-39P-201ENST00000362455 FAM47AQ5JRC9 791 aa6.86□□□□□ -1.31
RNU4-39P-201ENST00000362455 KHDC1LQ5JSQ8 128 aa6.86□□□□□ -1.31
RNU4-39P-201ENST00000362455 BRIX1Q8TDN6 353 aaKnown RBP6.86□□□□□ -1.31
RNU4-39P-201ENST00000362455 CCDC138Q96M89 665 aa6.86□□□□□ -1.31
RNU4-39P-201ENST00000362455 MYOCQ99972 504 aa6.86□□□□□ -1.31
RNU4-39P-201ENST00000362455 C1orf43Q9BWL3 253 aa6.86□□□□□ -1.31
RNU4-39P-201ENST00000362455 C11orf54Q9H0W9 315 aaPredicted RBP6.86□□□□□ -1.31
RNU4-39P-201ENST00000362455 CNNM1Q9NRU3 951 aa6.86□□□□□ -1.31
RNU4-39P-201ENST00000362455 CORO2BQ9UQ03 480 aa6.86□□□□□ -1.31
RNU4-39P-201ENST00000362455 BLMP54132 1417 aaPredicted RBP6.85□□□□□ -1.31
RNU4-39P-201ENST00000362455 LRPPRCP42704 1394 aaKnown RBP6.85□□□□□ -1.31
RNU4-39P-201ENST00000362455 ABCC11Q96J66 1382 aa6.85□□□□□ -1.31
RNU4-39P-201ENST00000362455 UBE2QL1A1L167 161 aa6.85□□□□□ -1.31
RNU4-39P-201ENST00000362455 RASA4BC9J798 803 aa6.85□□□□□ -1.31
RNU4-39P-201ENST00000362455 MYO1FO00160 1098 aa6.85□□□□□ -1.31
RNU4-39P-201ENST00000362455 IFRD1O00458 451 aaPredicted RBP6.85□□□□□ -1.31
RNU4-39P-201ENST00000362455 KPNA5O15131 536 aa6.85□□□□□ -1.31
RNU4-39P-201ENST00000362455 GRM6O15303 877 aa6.85□□□□□ -1.31
RNU4-39P-201ENST00000362455 RASA4O43374 803 aa6.85□□□□□ -1.31
RNU4-39P-201ENST00000362455 B4GALT3O60512 393 aa6.85□□□□□ -1.31
RNU4-39P-201ENST00000362455 AHSGP02765 367 aa6.85□□□□□ -1.31
RNU4-39P-201ENST00000362455 CREMQ03060 361 aa6.85□□□□□ -1.31
RNU4-39P-201ENST00000362455 KIAA2012Q0VF49 1180 aa6.85□□□□□ -1.31
RNU4-39P-201ENST00000362455 MRPL49Q13405 166 aaKnown RBP6.85□□□□□ -1.31
RNU4-39P-201ENST00000362455 RIN1Q13671 783 aa6.85□□□□□ -1.31
RNU4-39P-201ENST00000362455 ATP2B3Q16720 1220 aa6.85□□□□□ -1.31
RNU4-39P-201ENST00000362455 OTUD7BQ6GQQ9 843 aa6.85□□□□□ -1.31
RNU4-39P-201ENST00000362455 KRT28Q7Z3Y7 464 aa6.85□□□□□ -1.31
RNU4-39P-201ENST00000362455 FAM124AQ86V42 546 aa6.85□□□□□ -1.31
RNU4-39P-201ENST00000362455 SKAP1Q86WV1 359 aa6.85□□□□□ -1.31
RNU4-39P-201ENST00000362455 MRGPRX1Q96LB2 322 aa6.85□□□□□ -1.31
RNU4-39P-201ENST00000362455 SGCZQ96LD1 299 aa6.85□□□□□ -1.31
RNU4-39P-201ENST00000362455 KIAA1586Q9HCI6 787 aa6.85□□□□□ -1.31
RNU4-39P-201ENST00000362455 PLCB1Q9NQ66 1216 aa6.85□□□□□ -1.31
RNU4-39P-201ENST00000362455 SLC23A1Q9UHI7 598 aa6.85□□□□□ -1.31
RNU4-39P-201ENST00000362455 SNX13Q9Y5W8 968 aa6.85□□□□□ -1.31
RNU4-39P-201ENST00000362455 GLI3P10071 1580 aa6.84□□□□□ -1.31
RNU4-39P-201ENST00000362455 PMS2P1A4D2B8 440 aa6.84□□□□□ -1.31
RNU4-39P-201ENST00000362455 CXorf49A8MYA2 514 aaPredicted RBP6.84□□□□□ -1.31
RNU4-39P-201ENST00000362455 NUAK1O60285 661 aa6.84□□□□□ -1.31
RNU4-39P-201ENST00000362455 CNOT4O95628 575 aaKnown RBP6.84□□□□□ -1.31
RNU4-39P-201ENST00000362455 SBK3P0C264 359 aa6.84□□□□□ -1.31
RNU4-39P-201ENST00000362455 PIK3CGP48736 1102 aa6.84□□□□□ -1.31
RNU4-39P-201ENST00000362455 CASP5P51878 434 aa6.84□□□□□ -1.31
RNU4-39P-201ENST00000362455 RAC3P60763 192 aa6.84□□□□□ -1.31
RNU4-39P-201ENST00000362455 PTH1RQ03431 593 aa6.84□□□□□ -1.31
RNU4-39P-201ENST00000362455 PABPC1LQ4VXU2 614 aaKnown RBP6.84□□□□□ -1.31
RNU4-39P-201ENST00000362455 DACT2Q5SW24 774 aa6.84□□□□□ -1.31
RNU4-39P-201ENST00000362455 TCERG1LQ5VWI1 586 aa6.84□□□□□ -1.31
RNU4-39P-201ENST00000362455 SEM1Q6ZVN7 128 aa6.84□□□□□ -1.31
RNU4-39P-201ENST00000362455 ACRBPQ8NEB7 543 aa6.84□□□□□ -1.31
RNU4-39P-201ENST00000362455 SHCBP1Q8NEM2 672 aa6.84□□□□□ -1.31
RNU4-39P-201ENST00000362455 VPS37AQ8NEZ2 397 aa6.84□□□□□ -1.31
RNU4-39P-201ENST00000362455 SLC35B2Q8TB61 432 aa6.84□□□□□ -1.31
RNU4-39P-201ENST00000362455 TNPO1Q92973 898 aaKnown RBP6.84□□□□□ -1.31
RNU4-39P-201ENST00000362455 RIPOR3Q96MK2 946 aa6.84□□□□□ -1.31
RNU4-39P-201ENST00000362455 MRI1Q9BV20 369 aa6.84□□□□□ -1.31
RNU4-39P-201ENST00000362455 C12orf65Q9H3J6 166 aaKnown RBP6.84□□□□□ -1.31
RNU4-39P-201ENST00000362455 AGO3Q9H9G7 860 aaKnown RBP6.84□□□□□ -1.31
RNU4-39P-201ENST00000362455 PIH1D1Q9NWS0 290 aaKnown RBP6.84□□□□□ -1.31
RNU4-39P-201ENST00000362455 SIDT1Q9NXL6 827 aaKnown RBP6.84□□□□□ -1.31
RNU4-39P-201ENST00000362455 OGDHLQ9ULD0 1010 aa6.84□□□□□ -1.31
RNU4-39P-201ENST00000362455 TECPR2O15040 1411 aa6.84□□□□□ -1.32
RNU4-39P-201ENST00000362455 SPATA31E1Q6ZUB1 1445 aa6.84□□□□□ -1.32
RNU4-39P-201ENST00000362455 COL22A1Q8NFW1 1626 aaPredicted RBP6.83□□□□□ -1.32
RNU4-39P-201ENST00000362455 A0A1W2PRX2 142 aa6.83□□□□□ -1.32
RNU4-39P-201ENST00000362455 ISM1B1AKI9 464 aa6.83□□□□□ -1.32
RNU4-39P-201ENST00000362455 TBX3O15119 743 aa6.83□□□□□ -1.32
RNU4-39P-201ENST00000362455 NOBOXO60393 691 aa6.83□□□□□ -1.32
RNU4-39P-201ENST00000362455 STC2O76061 302 aa6.83□□□□□ -1.32
RNU4-39P-201ENST00000362455 SETSIPP0DME0 302 aa6.83□□□□□ -1.32
RNU4-39P-201ENST00000362455 BRAFP15056 766 aa6.83□□□□□ -1.32
RNU4-39P-201ENST00000362455 RPL17P18621 184 aaKnown RBP6.83□□□□□ -1.32
RNU4-39P-201ENST00000362455 ATP5JP18859 108 aa6.83□□□□□ -1.32
RNU4-39P-201ENST00000362455 FMO1Q01740 532 aa6.83□□□□□ -1.32
RNU4-39P-201ENST00000362455 CNGA2Q16280 664 aa6.83□□□□□ -1.32
RNU4-39P-201ENST00000362455 FAM214AQ32MH5 1076 aa6.83□□□□□ -1.32
RNU4-39P-201ENST00000362455 BORAQ6PGQ7 559 aa6.83□□□□□ -1.32
RNU4-39P-201ENST00000362455 C1orf228Q6PIY5 440 aa6.83□□□□□ -1.32
RNU4-39P-201ENST00000362455 TSHZ1Q6ZSZ6 1077 aa6.83□□□□□ -1.32
RNU4-39P-201ENST00000362455 NEIL1Q96FI4 390 aaPredicted RBP6.83□□□□□ -1.32
RNU4-39P-201ENST00000362455 DPYSL5Q9BPU6 564 aa6.83□□□□□ -1.32
RNU4-39P-201ENST00000362455 TCF25Q9BQ70 676 aa6.83□□□□□ -1.32
RNU4-39P-201ENST00000362455 EPC1Q9H2F5 836 aa6.83□□□□□ -1.32
RNU4-39P-201ENST00000362455 ZNF287Q9HBT7 754 aa6.83□□□□□ -1.32
RNU4-39P-201ENST00000362455 SLAMF7Q9NQ25 335 aa6.83□□□□□ -1.32
RNU4-39P-201ENST00000362455 GNL3LQ9NVN8 582 aaKnown RBP6.83□□□□□ -1.32
RNU4-39P-201ENST00000362455 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.83□□□□□ -1.32
RNU4-39P-201ENST00000362455 CPNE7Q9UBL6 633 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 1258.9 ms