RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 SLC9A1P19634 815 aa13.85□□□□□ -0.19
COL1A1-201ENST00000225964 GPD1P21695 349 aa13.85□□□□□ -0.19
COL1A1-201ENST00000225964 PMS1P54277 932 aaKnown RBP13.85□□□□□ -0.19
COL1A1-201ENST00000225964 KDSRQ06136 332 aa13.85□□□□□ -0.19
COL1A1-201ENST00000225964 HIC1Q14526 733 aa13.85□□□□□ -0.19
COL1A1-201ENST00000225964 FMR1NBQ8N0W7 255 aaPredicted RBP13.85□□□□□ -0.19
COL1A1-201ENST00000225964 CLEC4FQ8N1N0 589 aa13.85□□□□□ -0.19
COL1A1-201ENST00000225964 PPP1R2P1Q96PQ5 205 aa13.85□□□□□ -0.19
COL1A1-201ENST00000225964 TSEN34Q9BSV6 310 aaKnown RBP13.85□□□□□ -0.19
COL1A1-201ENST00000225964 KDM6BO15054 1643 aa13.85□□□□□ -0.19
COL1A1-201ENST00000225964 CYP4A22Q5TCH4 519 aa13.85□□□□□ -0.19
COL1A1-201ENST00000225964 ATP6V0D2Q8N8Y2 350 aa13.85□□□□□ -0.19
COL1A1-201ENST00000225964 TMEM39BQ9GZU3 492 aa13.85□□□□□ -0.19
COL1A1-201ENST00000225964 PRR12Q9ULL5 1215 aa13.85□□□□□ -0.19
COL1A1-201ENST00000225964 HEATR9A2RTY3 570 aa13.85□□□□□ -0.19
COL1A1-201ENST00000225964 FAM47DPA6NHR8 397 aa13.85□□□□□ -0.19
COL1A1-201ENST00000225964 H7C4K7 107 aa13.85□□□□□ -0.19
COL1A1-201ENST00000225964 CHGBP05060 677 aa13.85□□□□□ -0.19
COL1A1-201ENST00000225964 PLA2G4AP47712 749 aa13.85□□□□□ -0.19
COL1A1-201ENST00000225964 ATXN3P54252 364 aaPredicted RBP13.85□□□□□ -0.19
COL1A1-201ENST00000225964 ANKS6Q68DC2 871 aa13.85□□□□□ -0.19
COL1A1-201ENST00000225964 FBXO38Q6PIJ6 1188 aa13.85□□□□□ -0.19
COL1A1-201ENST00000225964 SYDE1Q6ZW31 735 aaPredicted RBP13.85□□□□□ -0.19
COL1A1-201ENST00000225964 VMP1Q96GC9 406 aa13.85□□□□□ -0.19
COL1A1-201ENST00000225964 OSBPL10Q9BXB5 764 aa13.85□□□□□ -0.19
COL1A1-201ENST00000225964 SPASTQ9UBP0 616 aa13.85□□□□□ -0.19
COL1A1-201ENST00000225964 AMACRQ9UHK6 382 aa13.85□□□□□ -0.19
COL1A1-201ENST00000225964 ENO3P13929 434 aaPredicted RBP13.84□□□□□ -0.19
COL1A1-201ENST00000225964 RFX3P48380 749 aa13.84□□□□□ -0.19
COL1A1-201ENST00000225964 SMTNL2Q2TAL5 461 aa13.84□□□□□ -0.19
COL1A1-201ENST00000225964 CENPPQ6IPU0 288 aa13.84□□□□□ -0.19
COL1A1-201ENST00000225964 WWP1Q9H0M0 922 aa13.84□□□□□ -0.19
COL1A1-201ENST00000225964 RRN3P2A6NIE6 340 aa13.84□□□□□ -0.19
COL1A1-201ENST00000225964 AKAP10O43572 662 aa13.84□□□□□ -0.19
COL1A1-201ENST00000225964 NR3C2P08235 984 aa13.84□□□□□ -0.19
COL1A1-201ENST00000225964 FAM200BP0CF97 657 aa13.84□□□□□ -0.19
COL1A1-201ENST00000225964 CARNMT1Q8N4J0 409 aa13.84□□□□□ -0.19
COL1A1-201ENST00000225964 CYGBQ8WWM9 190 aa13.84□□□□□ -0.19
COL1A1-201ENST00000225964 MAP3K13O43283 966 aa13.84□□□□□ -0.19
COL1A1-201ENST00000225964 MBL2P11226 248 aaPredicted RBP13.84□□□□□ -0.19
COL1A1-201ENST00000225964 STAT4Q14765 748 aa13.84□□□□□ -0.19
COL1A1-201ENST00000225964 CPSF1Q10570 1443 aaKnown RBP13.84□□□□□ -0.19
COL1A1-201ENST00000225964 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.84□□□□□ -0.19
COL1A1-201ENST00000225964 HBP1O60381 514 aa13.84□□□□□ -0.19
COL1A1-201ENST00000225964 CLASP2O75122 1294 aaKnown RBP13.84□□□□□ -0.19
COL1A1-201ENST00000225964 NEK2P51955 445 aa13.84□□□□□ -0.19
COL1A1-201ENST00000225964 ZNF177Q13360 481 aaPredicted RBP13.84□□□□□ -0.19
COL1A1-201ENST00000225964 TMEM132BQ14DG7 1078 aa13.84□□□□□ -0.19
COL1A1-201ENST00000225964 CYTH1Q15438 398 aa13.84□□□□□ -0.19
COL1A1-201ENST00000225964 TRMT2AQ8IZ69 625 aaKnown RBP13.84□□□□□ -0.19
COL1A1-201ENST00000225964 KRT35Q92764 455 aa13.84□□□□□ -0.19
COL1A1-201ENST00000225964 MRPL1Q9BYD6 325 aaKnown RBP13.84□□□□□ -0.19
COL1A1-201ENST00000225964 ARHGEF40Q8TER5 1519 aa13.84□□□□□ -0.19
COL1A1-201ENST00000225964 ADCY3O60266 1144 aa13.84□□□□□ -0.19
COL1A1-201ENST00000225964 WDR47O94967 919 aa13.84□□□□□ -0.19
COL1A1-201ENST00000225964 NLRP14Q86W24 1093 aa13.84□□□□□ -0.19
COL1A1-201ENST00000225964 FAM118BQ9BPY3 351 aa13.84□□□□□ -0.19
COL1A1-201ENST00000225964 STK33Q9BYT3 514 aa13.84□□□□□ -0.19
COL1A1-201ENST00000225964 SCUBE2Q9NQ36 999 aa13.84□□□□□ -0.19
COL1A1-201ENST00000225964 SLC39A10Q9ULF5 831 aa13.84□□□□□ -0.19
COL1A1-201ENST00000225964 LZTS3O60299 673 aaPredicted RBP13.83□□□□□ -0.19
COL1A1-201ENST00000225964 PHF2O75151 1096 aa13.83□□□□□ -0.19
COL1A1-201ENST00000225964 TCF7P36402 384 aaPredicted RBP13.83□□□□□ -0.19
COL1A1-201ENST00000225964 RGS2P41220 211 aa13.83□□□□□ -0.19
COL1A1-201ENST00000225964 FMO5P49326 533 aa13.83□□□□□ -0.19
COL1A1-201ENST00000225964 ERFP50548 548 aa13.83□□□□□ -0.19
COL1A1-201ENST00000225964 GTF2A2P52657 109 aa13.83□□□□□ -0.19
COL1A1-201ENST00000225964 SAMD7Q7Z3H4 446 aa13.83□□□□□ -0.19
COL1A1-201ENST00000225964 ADCK1Q86TW2 530 aa13.83□□□□□ -0.19
COL1A1-201ENST00000225964 GLT1D1Q96MS3 346 aa13.83□□□□□ -0.19
COL1A1-201ENST00000225964 NPHS2Q9NP85 383 aa13.83□□□□□ -0.19
COL1A1-201ENST00000225964 GTF2H1P32780 548 aa13.83□□□□□ -0.2
COL1A1-201ENST00000225964 LINC00116Q8NCU8 138 aa13.83□□□□□ -0.2
COL1A1-201ENST00000225964 YME1L1Q96TA2 773 aa13.83□□□□□ -0.2
COL1A1-201ENST00000225964 KIF2CQ99661 725 aa13.83□□□□□ -0.2
COL1A1-201ENST00000225964 SMAD5Q99717 465 aaKnown RBP13.83□□□□□ -0.2
COL1A1-201ENST00000225964 IL1RL2Q9HB29 575 aa13.83□□□□□ -0.2
COL1A1-201ENST00000225964 STOML1Q9UBI4 398 aa13.83□□□□□ -0.2
COL1A1-201ENST00000225964 PNPLA7Q6ZV29 1317 aa13.83□□□□□ -0.2
COL1A1-201ENST00000225964 EXTL3O43909 919 aa13.83□□□□□ -0.2
COL1A1-201ENST00000225964 ASS1P00966 412 aaKnown RBP13.83□□□□□ -0.2
COL1A1-201ENST00000225964 ITGB3P05106 788 aa13.83□□□□□ -0.2
COL1A1-201ENST00000225964 DARSP14868 501 aaKnown RBP13.83□□□□□ -0.2
COL1A1-201ENST00000225964 NUMBP49757 651 aa13.83□□□□□ -0.2
COL1A1-201ENST00000225964 ALDH6A1Q02252 535 aaKnown RBP13.83□□□□□ -0.2
COL1A1-201ENST00000225964 ZC2HC1CQ53FD0 456 aaPredicted RBP13.83□□□□□ -0.2
COL1A1-201ENST00000225964 PRR5LQ6MZQ0 368 aa13.83□□□□□ -0.2
COL1A1-201ENST00000225964 BTNL9Q6UXG8 535 aa13.83□□□□□ -0.2
COL1A1-201ENST00000225964 CHST13Q8NET6 341 aa13.83□□□□□ -0.2
COL1A1-201ENST00000225964 HPDLQ96IR7 371 aa13.83□□□□□ -0.2
COL1A1-201ENST00000225964 NSMCE4AQ9NXX6 385 aa13.83□□□□□ -0.2
COL1A1-201ENST00000225964 PKD2L2Q9NZM6 624 aa13.83□□□□□ -0.2
COL1A1-201ENST00000225964 HLA-DRAP01903 254 aa13.83□□□□□ -0.2
COL1A1-201ENST00000225964 PNMA6AP0CW24 399 aaPredicted RBP13.83□□□□□ -0.2
COL1A1-201ENST00000225964 ACADMP11310 421 aa13.83□□□□□ -0.2
COL1A1-201ENST00000225964 BRD2P25440 801 aaKnown RBP13.83□□□□□ -0.2
COL1A1-201ENST00000225964 SLC16A1P53985 500 aa13.83□□□□□ -0.2
COL1A1-201ENST00000225964 LAMC2Q13753 1193 aa13.83□□□□□ -0.2
COL1A1-201ENST00000225964 PDK1Q15118 436 aa13.83□□□□□ -0.2
COL1A1-201ENST00000225964 UGP2Q16851 508 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms