RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 RAP1GAPP47736 663 aa19.34■□□□□ 0.69
VIM-201ENST00000224237 NOMO3P69849 1222 aa19.34■□□□□ 0.69
VIM-201ENST00000224237 NAA30Q147X3 362 aaPredicted RBP19.34■□□□□ 0.69
VIM-201ENST00000224237 MTFR1Q15390 333 aa19.34■□□□□ 0.69
VIM-201ENST00000224237 ERCC6LQ2NKX8 1250 aa19.34■□□□□ 0.69
VIM-201ENST00000224237 NAA35Q5VZE5 725 aa19.34■□□□□ 0.69
VIM-201ENST00000224237 RSRC2Q7L4I2 434 aaKnown RBP19.34■□□□□ 0.69
VIM-201ENST00000224237 PEX26Q7Z412 305 aa19.34■□□□□ 0.69
VIM-201ENST00000224237 ANKRD7Q92527 254 aa19.34■□□□□ 0.69
VIM-201ENST00000224237 CYFIP2Q96F07 1278 aa19.34■□□□□ 0.69
VIM-201ENST00000224237 RPGRIP1Q96KN7 1286 aa19.34■□□□□ 0.69
VIM-201ENST00000224237 CAPZA3Q96KX2 299 aa19.34■□□□□ 0.69
VIM-201ENST00000224237 RNF39Q9H2S5 420 aa19.34■□□□□ 0.69
VIM-201ENST00000224237 FAM105AQ9NUU6 356 aa19.34■□□□□ 0.69
VIM-201ENST00000224237 UVRAGQ9P2Y5 699 aa19.34■□□□□ 0.69
VIM-201ENST00000224237 COG5Q9UP83 839 aa19.34■□□□□ 0.69
VIM-201ENST00000224237 PTPN22Q9Y2R2 807 aa19.34■□□□□ 0.69
VIM-201ENST00000224237 SMIM28A0A1B0GU29 152 aa19.33■□□□□ 0.69
VIM-201ENST00000224237 ZNF185O15231 689 aa19.33■□□□□ 0.69
VIM-201ENST00000224237 BUB1BO60566 1050 aaPredicted RBP19.33■□□□□ 0.69
VIM-201ENST00000224237 PAEPP09466 180 aa19.33■□□□□ 0.69
VIM-201ENST00000224237 ZSCAN20P17040 1043 aaPredicted RBP19.33■□□□□ 0.69
VIM-201ENST00000224237 RPS6KA1Q15418 735 aa19.33■□□□□ 0.69
VIM-201ENST00000224237 ELF2Q15723 593 aa19.33■□□□□ 0.69
VIM-201ENST00000224237 FBXO47Q5MNV8 452 aa19.33■□□□□ 0.69
VIM-201ENST00000224237 MCOLN2Q8IZK6 566 aa19.33■□□□□ 0.69
VIM-201ENST00000224237 CAGE1Q8TC20 777 aa19.33■□□□□ 0.69
VIM-201ENST00000224237 CPA5Q8WXQ8 436 aa19.33■□□□□ 0.69
VIM-201ENST00000224237 SDCBP2Q9H190 292 aa19.33■□□□□ 0.69
VIM-201ENST00000224237 TRPV6Q9H1D0 765 aa19.33■□□□□ 0.69
VIM-201ENST00000224237 GOLPH3Q9H4A6 298 aa19.33■□□□□ 0.69
VIM-201ENST00000224237 STARD7Q9NQZ5 370 aa19.33■□□□□ 0.69
VIM-201ENST00000224237 WBP1LQ9NX94 342 aa19.33■□□□□ 0.69
VIM-201ENST00000224237 KLK14Q9P0G3 267 aa19.33■□□□□ 0.69
VIM-201ENST00000224237 PACSIN2Q9UNF0 486 aaPredicted RBP19.33■□□□□ 0.69
VIM-201ENST00000224237 CILPO75339 1184 aa19.33■□□□□ 0.68
VIM-201ENST00000224237 KIF4AO95239 1232 aa19.33■□□□□ 0.68
VIM-201ENST00000224237 LSM8O95777 96 aaKnown RBP19.33■□□□□ 0.68
VIM-201ENST00000224237 ATF7P17544 494 aaPredicted RBP19.33■□□□□ 0.68
VIM-201ENST00000224237 CYP3A5P20815 502 aa19.33■□□□□ 0.68
VIM-201ENST00000224237 BRD2P25440 801 aaKnown RBP19.33■□□□□ 0.68
VIM-201ENST00000224237 CDH8P55286 799 aa19.33■□□□□ 0.68
VIM-201ENST00000224237 PAK2Q13177 524 aa19.33■□□□□ 0.68
VIM-201ENST00000224237 TRIM71Q2Q1W2 868 aaKnown RBP19.33■□□□□ 0.68
VIM-201ENST00000224237 FAM26DQ5JW98 314 aa19.33■□□□□ 0.68
VIM-201ENST00000224237 CREG2Q8IUH2 290 aa19.33■□□□□ 0.68
VIM-201ENST00000224237 PASD1Q8IV76 773 aa19.33■□□□□ 0.68
VIM-201ENST00000224237 COG1Q8WTW3 980 aa19.33■□□□□ 0.68
VIM-201ENST00000224237 C18orf25Q96B23 403 aaPredicted RBP19.33■□□□□ 0.68
VIM-201ENST00000224237 VCPIP1Q96JH7 1222 aa19.33■□□□□ 0.68
VIM-201ENST00000224237 PSMB7Q99436 277 aa19.33■□□□□ 0.68
VIM-201ENST00000224237 AGO3Q9H9G7 860 aaKnown RBP19.33■□□□□ 0.68
VIM-201ENST00000224237 ABCB6Q9NP58 842 aa19.33■□□□□ 0.68
VIM-201ENST00000224237 AVENQ9NQS1 362 aaPredicted RBP19.33■□□□□ 0.68
VIM-201ENST00000224237 RNF14Q9UBS8 474 aa19.33■□□□□ 0.68
VIM-201ENST00000224237 CNOT8Q9UFF9 292 aaKnown RBP19.33■□□□□ 0.68
VIM-201ENST00000224237 PCDHGC3Q9UN70 934 aa19.33■□□□□ 0.68
VIM-201ENST00000224237 A0A0U1RQG5 324 aaPredicted RBP19.32■□□□□ 0.68
VIM-201ENST00000224237 ATMINO43313 823 aaPredicted RBP19.32■□□□□ 0.68
VIM-201ENST00000224237 MED7O43513 233 aa19.32■□□□□ 0.68
VIM-201ENST00000224237 CFHP08603 1231 aa19.32■□□□□ 0.68
VIM-201ENST00000224237 CXCR5P32302 372 aa19.32■□□□□ 0.68
VIM-201ENST00000224237 INCA1Q0VD86 236 aa19.32■□□□□ 0.68
VIM-201ENST00000224237 TEX35Q5T0J7 233 aa19.32■□□□□ 0.68
VIM-201ENST00000224237 C9orf57Q5W0N0 161 aa19.32■□□□□ 0.68
VIM-201ENST00000224237 C11orf63Q6NUN7 778 aa19.32■□□□□ 0.68
VIM-201ENST00000224237 MON1BQ7L1V2 547 aa19.32■□□□□ 0.68
VIM-201ENST00000224237 NT5DC3Q86UY8 548 aa19.32■□□□□ 0.68
VIM-201ENST00000224237 USP38Q8NB14 1042 aa19.32■□□□□ 0.68
VIM-201ENST00000224237 SLC43A3Q8NBI5 491 aa19.32■□□□□ 0.68
VIM-201ENST00000224237 ZNF564Q8TBZ8 553 aaPredicted RBP19.32■□□□□ 0.68
VIM-201ENST00000224237 MMS19Q96T76 1030 aa19.32■□□□□ 0.68
VIM-201ENST00000224237 NUP85Q9BW27 656 aa19.32■□□□□ 0.68
VIM-201ENST00000224237 ERVK-5Q9HDB9 667 aa19.32■□□□□ 0.68
VIM-201ENST00000224237 AMFRQ9UKV5 643 aa19.32■□□□□ 0.68
VIM-201ENST00000224237 PADI3Q9ULW8 664 aa19.32■□□□□ 0.68
VIM-201ENST00000224237 CEP83Q9Y592 693 aa19.32■□□□□ 0.68
VIM-201ENST00000224237 SQORQ9Y6N5 450 aa19.32■□□□□ 0.68
VIM-201ENST00000224237 KBTBD13C9JR72 458 aa19.31■□□□□ 0.68
VIM-201ENST00000224237 CES2O00748 559 aa19.31■□□□□ 0.68
VIM-201ENST00000224237 GHRP10912 638 aa19.31■□□□□ 0.68
VIM-201ENST00000224237 RAD23BP54727 409 aa19.31■□□□□ 0.68
VIM-201ENST00000224237 PHF13Q86YI8 300 aaPredicted RBP19.31■□□□□ 0.68
VIM-201ENST00000224237 ZNF560Q96MR9 790 aa19.31■□□□□ 0.68
VIM-201ENST00000224237 ZNF518BQ9C0D4 1074 aa19.31■□□□□ 0.68
VIM-201ENST00000224237 BARX2Q9UMQ3 279 aaPredicted RBP19.31■□□□□ 0.68
VIM-201ENST00000224237 STXBP5LQ9Y2K9 1186 aa19.31■□□□□ 0.68
VIM-201ENST00000224237 CD52P31358 61 aa19.31■□□□□ 0.68
VIM-201ENST00000224237 SCN1AP35498 2009 aa19.31■□□□□ 0.68
VIM-201ENST00000224237 PNPLA4P41247 253 aa19.31■□□□□ 0.68
VIM-201ENST00000224237 CCDC181Q5TID7 509 aa19.31■□□□□ 0.68
VIM-201ENST00000224237 ZNF572Q7Z3I7 529 aaPredicted RBP19.31■□□□□ 0.68
VIM-201ENST00000224237 WHAMMQ8TF30 809 aa19.31■□□□□ 0.68
VIM-201ENST00000224237 UBE2Q2Q8WVN8 375 aa19.31■□□□□ 0.68
VIM-201ENST00000224237 RABGGTAQ92696 567 aa19.31■□□□□ 0.68
VIM-201ENST00000224237 TMEM176AQ96HP8 235 aa19.31■□□□□ 0.68
VIM-201ENST00000224237 DEFB118Q96PH6 123 aa19.31■□□□□ 0.68
VIM-201ENST00000224237 TRAIPQ9BWF2 469 aa19.31■□□□□ 0.68
VIM-201ENST00000224237 PHF24Q9UPV7 400 aa19.31■□□□□ 0.68
VIM-201ENST00000224237 PIRO00625 290 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms