RNA–Protein interactions for RNA: ENSMUST00000008004.9

Ddx49-201, Transcript of Probable ATP-dependent RNA helicase DDX49, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx49, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49-201ENSMUST00000008004 Ctnnbl1Q9CWL8 563 aaKnown RBP16.43■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Znf394Q9Z1D9 521 aa16.43■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Lrrc73B2RWC4 316 aa16.42■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Pja1O55176 578 aa16.42■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Pafah1b1P63005 410 aaKnown RBP16.42■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Lrch2Q3UMG5 773 aa16.42■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Nlrc4Q3UP24 1024 aa16.42■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Cct6bQ61390 531 aa16.42■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Wdtc1Q80ZK9 677 aa16.42■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Slc2a12Q8BFW9 622 aa16.42■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Ttc39bQ8BYY4 617 aa16.42■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Inpp5fQ8CDA1 1132 aa16.42■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Fbxo33Q8VE08 562 aa16.42■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Afg3l1Q920A7 789 aaKnown RBP16.42■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Pcyox1Q9CQF9 505 aa16.42■□□□□ 0.22
Ddx49-201ENSMUST00000008004 1700123K08RikQ9D991 295 aa16.42■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Ankrd2Q9WV06 328 aa16.42■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Xpnpep3B7ZMP1 506 aaKnown RBP16.42■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Tcp10bE9PYJ0 438 aa16.42■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Adam19O35674 920 aa16.42■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Trim30aP15533 496 aa16.42■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Kcnj4P52189 445 aa16.42■□□□□ 0.22
Ddx49-201ENSMUST00000008004 YwhaeP62259 255 aaKnown RBP16.42■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Olfr670Q7TRP3 312 aa16.42■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Mical2Q8BML1 960 aa16.42■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Metap1Q8BP48 386 aaKnown RBP16.42■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Q8C5S3 137 aa16.42■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Lrrc45Q8CIM1 670 aa16.42■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Adgrg2Q8CJ12 1009 aa16.42■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Commd10Q8JZY2 202 aa16.42■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Olfr1352Q8VGX5 309 aa16.42■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Chn1Q91V57 459 aa16.42■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Srgap2Q91Z67 1071 aa16.42■□□□□ 0.22
Ddx49-201ENSMUST00000008004 GarsQ9CZD3 729 aaKnown RBP16.42■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Dnah12Q3V0Q1 3086 aa16.41■□□□□ 0.22
Ddx49-201ENSMUST00000008004 1700001O22RikA2APZ1 375 aa16.41■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Cyp2b13A6H6J2 491 aa16.41■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Fam71aB7XG49 585 aa16.41■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Card6E9PWH2 1175 aa16.41■□□□□ 0.22
Ddx49-201ENSMUST00000008004 CraddO88843 199 aa16.41■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Ercc5P35689 1170 aa16.41■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Pi4k2aQ2TBE6 479 aa16.41■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Erich4Q3UNU4 136 aa16.41■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Ptpn18Q61152 453 aa16.41■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Krit1Q6S5J6 736 aa16.41■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Tdpoz2Q717B2 364 aa16.41■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Ints6lQ8BND4 861 aa16.41■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Ppfibp1Q8C8U0 969 aaKnown RBP16.41■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Castor2Q8CAB8 329 aa16.41■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Cpa5Q8R4H4 436 aa16.41■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Fuca2Q99KR8 461 aa16.41■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Oxct1Q9D0K2 520 aaKnown RBP16.41■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Mkrn2Q9ERV1 416 aaKnown RBP16.41■□□□□ 0.22
Ddx49-201ENSMUST00000008004 PalmdQ9JHU2 551 aa16.41■□□□□ 0.22
Ddx49-201ENSMUST00000008004 PcntP48725 2898 aa16.41■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Gm8369E9PZI3 166 aa16.4■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Gm6583E9Q8Z1 469 aa16.4■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Nkx1-1G3UXB3 402 aa16.4■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Mroh4G3X8W1 983 aa16.4■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Vmn2r77L7N2B7 854 aa16.4■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Edil3O35474 480 aa16.4■□□□□ 0.22
Ddx49-201ENSMUST00000008004 PrphP15331 475 aa16.4■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Gja8P28236 440 aa16.4■□□□□ 0.22
Ddx49-201ENSMUST00000008004 IhhP97812 411 aa16.4■□□□□ 0.22
Ddx49-201ENSMUST00000008004 HmmrQ00547 794 aaKnown RBP16.4■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Bpifa6Q0VGU8 367 aa16.4■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Atg9bQ6EBV9 922 aa16.4■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Mpp4Q6P7F1 635 aa16.4■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Arhgap11aQ80Y19 987 aa16.4■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Tor4aQ8BH02 426 aa16.4■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Prl7b1Q8CGZ9 251 aa16.4■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Gga1Q8R0H9 635 aa16.4■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Zdhhc3Q8R173 299 aa16.4■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Vps18Q8R307 973 aa16.4■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Ssr1Q9CY50 286 aaKnown RBP16.4■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Acsl3Q9CZW4 720 aaKnown RBP16.4■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Gdap2Q9DBL2 498 aa16.4■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Gm281D3Z1Y0 860 aa16.4■□□□□ 0.22
Ddx49-201ENSMUST00000008004 XntrpcF8VQM8 1264 aa16.4■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Mroh9G5E8L9 891 aa16.4■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Top6blJ3QMY9 579 aa16.4■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Bcl7cO08664 217 aa16.4■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Lmo2P25801 158 aa16.4■□□□□ 0.22
Ddx49-201ENSMUST00000008004 SqleP52019 572 aa16.4■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Cul4aQ3TCH7 759 aa16.4■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Arhgap10Q6Y5D8 786 aa16.4■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Snd1Q78PY7 910 aaKnown RBP16.4■□□□□ 0.22
Ddx49-201ENSMUST00000008004 PolrmtQ8BKF1 1207 aaKnown RBP16.4■□□□□ 0.22
Ddx49-201ENSMUST00000008004 ClasrpQ8CFC7 668 aa16.4■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Unc45bQ8CGY6 931 aaKnown RBP16.4■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Trhr2Q9ERT2 382 aa16.4■□□□□ 0.22
Ddx49-201ENSMUST00000008004 DgkeQ9R1C6 564 aa16.4■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Plxna1P70206 1894 aa16.39■□□□□ 0.21
Ddx49-201ENSMUST00000008004 Cyp4a29A0A087WPC3 509 aa16.39■□□□□ 0.21
Ddx49-201ENSMUST00000008004 Mindy4b-psA0A1W2P7H6 457 aa16.39■□□□□ 0.21
Ddx49-201ENSMUST00000008004 Gm8994E9PV04 411 aaKnown RBP16.39■□□□□ 0.21
Ddx49-201ENSMUST00000008004 Dpysl4O35098 572 aa16.39■□□□□ 0.21
Ddx49-201ENSMUST00000008004 Ptp4a2O70274 167 aa16.39■□□□□ 0.21
Ddx49-201ENSMUST00000008004 Ms4a1P19437 291 aa16.39■□□□□ 0.21
Ddx49-201ENSMUST00000008004 Ctnnd1P30999 938 aaKnown RBP16.39■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 35.9 ms