RNA–Protein interactions for RNA: snR34

snR34, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR34, Length 203 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR34snR34 YBR285WP38354 144 aa2.17□□□□□ -2.06
snR34snR34 POP3P53833 195 aaPredicted RBP2.16□□□□□ -2.06
snR34snR34 PGA2P53903 129 aa2.16□□□□□ -2.06
snR34snR34 LSM7P53905 115 aaKnown RBP2.16□□□□□ -2.06
snR34snR34 GIS3Q12418 502 aa2.16□□□□□ -2.06
snR34snR34 RPL25P04456 142 aaKnown RBP2.15□□□□□ -2.07
snR34snR34 CPA1P07258 411 aaKnown RBP2.15□□□□□ -2.07
snR34snR34 YDR274CP87283 123 aa2.15□□□□□ -2.07
snR34snR34 RPB3P16370 318 aaKnown RBP2.14□□□□□ -2.07
snR34snR34 MER1P16523 270 aa2.14□□□□□ -2.07
snR34snR34 MAG1P22134 296 aaKnown RBP2.14□□□□□ -2.07
snR34snR34 SHE2P36068 246 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
snR34snR34 KNH1P50112 268 aa2.14□□□□□ -2.07
snR34snR34 BNA7Q04066 261 aa2.14□□□□□ -2.07
snR34snR34 ATP15P21306 62 aa2.13□□□□□ -2.07
snR34snR34 TAF14P35189 244 aa2.13□□□□□ -2.07
snR34snR34 YCR087C-AP37263 153 aa2.13□□□□□ -2.07
snR34snR34 TRM5P38793 499 aa2.13□□□□□ -2.07
snR34snR34 COG5P53951 403 aa2.13□□□□□ -2.07
snR34snR34 MDM32Q12171 622 aa2.13□□□□□ -2.07
snR34snR34 YLR236CA0A023PZG4 107 aa2.12□□□□□ -2.07
snR34snR34 TVP38P36164 337 aa2.12□□□□□ -2.07
snR34snR34 CUS2P53830 285 aaPredicted RBP2.12□□□□□ -2.07
snR34snR34 YNG1Q08465 219 aa2.12□□□□□ -2.07
snR34snR34 SIR2P06700 562 aa2.11□□□□□ -2.07
snR34snR34 IKI1P38874 309 aa2.11□□□□□ -2.07
snR34snR34 MPA43P53583 542 aaPredicted RBP2.11□□□□□ -2.07
snR34snR34 TIM11P81449 96 aaPredicted RBP2.11□□□□□ -2.07
snR34snR34 YOL160WQ08321 113 aa2.11□□□□□ -2.07
snR34snR34 YDL180WQ12301 547 aa2.11□□□□□ -2.07
snR34snR34 CKS1P20486 150 aaKnown RBP2.1□□□□□ -2.07
snR34snR34 HMF1P40037 129 aaKnown RBP2.1□□□□□ -2.07
snR34snR34 RPL27AP0C2H6 136 aaKnown RBP2.09□□□□□ -2.07
snR34snR34 RFA3P26755 122 aaKnown RBP2.09□□□□□ -2.07
snR34snR34 YER076CP40049 302 aa2.09□□□□□ -2.07
snR34snR34 CUE4Q04201 117 aaPredicted RBP2.09□□□□□ -2.07
snR34snR34 MSB2P32334 1306 aa2.08□□□□□ -2.08
snR34snR34 IKI3Q06706 1349 aaKnown RBP2.08□□□□□ -2.08
snR34snR34 HTB1P02293 131 aaKnown RBP2.07□□□□□ -2.08
snR34snR34 HTB2P02294 131 aa2.07□□□□□ -2.08
snR34snR34 AIM25P47140 327 aa2.07□□□□□ -2.08
snR34snR34 UBC7Q02159 165 aa2.07□□□□□ -2.08
snR34snR34 RAD28Q12021 506 aa2.07□□□□□ -2.08
snR34snR34 SEC11P15367 167 aa2.06□□□□□ -2.08
snR34snR34 OPY1P38271 328 aa2.06□□□□□ -2.08
snR34snR34 VMA22P38784 181 aa2.06□□□□□ -2.08
snR34snR34 HNT1Q04344 158 aaKnown RBP2.06□□□□□ -2.08
snR34snR34 KDX1P36005 433 aa2.05□□□□□ -2.08
snR34snR34 YNL146C-AQ3E7Z1 64 aa2.05□□□□□ -2.08
snR34snR34 CDC36P06100 191 aaPredicted RBP2.04□□□□□ -2.08
snR34snR34 RPB4P20433 221 aaPredicted RBP2.04□□□□□ -2.08
snR34snR34 NTG1P31378 399 aa2.04□□□□□ -2.08
snR34snR34 GGA1Q06336 557 aa2.04□□□□□ -2.08
snR34snR34 YRA1Q12159 226 aaKnown RBP2.04□□□□□ -2.08
snR34snR34 OCH1P31755 480 aa2.03□□□□□ -2.08
snR34snR34 RIO2P40160 425 aaKnown RBP2.03□□□□□ -2.08
snR34snR34 MPC3P53311 146 aa2.03□□□□□ -2.08
snR34snR34 ODC2Q99297 307 aa2.03□□□□□ -2.08
snR34snR34 YER034WP40022 185 aaKnown RBP2.02□□□□□ -2.09
snR34snR34 ERG10P41338 398 aaKnown RBP2.02□□□□□ -2.09
snR34snR34 CBF1P17106 351 aa2.01□□□□□ -2.09
snR34snR34 SPO13P23624 291 aa2.01□□□□□ -2.09
snR34snR34 TVP23P38962 199 aa2.01□□□□□ -2.09
snR34snR34 YMR226CQ05016 267 aaKnown RBP2.01□□□□□ -2.09
snR34snR34 VAR1P02381 398 aa2□□□□□ -2.09
snR34snR34 POR1P04840 283 aaKnown RBP2□□□□□ -2.09
snR34snR34 YCR090CP25654 182 aaKnown RBP2□□□□□ -2.09
snR34snR34 PAN3P36102 679 aaPredicted RBP2□□□□□ -2.09
snR34snR34 RFC4P40339 323 aaKnown RBP2□□□□□ -2.09
snR34snR34 YHR007C-AQ07074 71 aa1.99□□□□□ -2.09
snR34snR34 MATALPHA2P0CY08 210 aa1.98□□□□□ -2.09
snR34snR34 HMLALPHA2P0CY09 210 aa1.98□□□□□ -2.09
snR34snR34 YKT6P36015 200 aaKnown RBP1.98□□□□□ -2.09
snR34snR34 DGA1Q08650 418 aa1.98□□□□□ -2.09
snR34snR34 YCL012CQ8J0M4 134 aa1.98□□□□□ -2.09
snR34snR34 CNB1P25296 175 aa1.97□□□□□ -2.09
snR34snR34 YPL073CP40323 161 aa1.97□□□□□ -2.09
snR34snR34 YAE1P47118 141 aaPredicted RBP1.97□□□□□ -2.09
snR34snR34 MMS2P53152 137 aa1.97□□□□□ -2.09
snR34snR34 GET1P53192 235 aa1.97□□□□□ -2.09
snR34snR34 FUS2Q05670 677 aa1.97□□□□□ -2.09
snR34snR34 MBF1O14467 151 aaKnown RBP1.96□□□□□ -2.1
snR34snR34 AIM2P39721 246 aa1.96□□□□□ -2.1
snR34snR34 YEA4P40004 342 aa1.96□□□□□ -2.1
snR34snR34 ARO8P53090 500 aaKnown RBP1.96□□□□□ -2.1
snR34snR34 RCE1Q03530 315 aa1.96□□□□□ -2.1
snR34snR34 YPR174CQ06616 221 aaPredicted RBP1.96□□□□□ -2.1
snR34snR34 MRS1P07266 363 aa1.95□□□□□ -2.1
snR34snR34 FLX1P40464 311 aa1.95□□□□□ -2.1
snR34snR34 SKI6P46948 246 aaPredicted RBP1.95□□□□□ -2.1
snR34snR34 FAS1P07149 2051 aaKnown RBP1.94□□□□□ -2.1
snR34snR34 ASF2P32448 525 aaPredicted RBP1.94□□□□□ -2.1
snR34snR34 SER2P42941 309 aa1.94□□□□□ -2.1
snR34snR34 ARP3P47117 449 aaKnown RBP1.94□□□□□ -2.1
snR34snR34 YNL247WP53852 767 aaKnown RBP1.94□□□□□ -2.1
snR34snR34 MRPS17Q03246 237 aaPredicted RBP1.94□□□□□ -2.1
snR34snR34 ABP140Q08641 628 aaKnown RBP1.94□□□□□ -2.1
snR34snR34 ACC1Q00955 2233 aaKnown RBP1.93□□□□□ -2.1
snR34snR34 MDM35O60200 86 aa1.93□□□□□ -2.1
snR34snR34 AQY2P0CD90 149 aa1.93□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 32.4 ms