RNA–Protein interactions for RNA: YOL133W

HRT1, Transcript of RING-H2 domain core subunit of multiple ubiquitin ligase complexes, yeastyeast

Gene HRT1, Length 366 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRT1YOL133W HTB1P02293 131 aaKnown RBP2.32□□□□□ -2.04
HRT1YOL133W HTB2P02294 131 aa2.32□□□□□ -2.04
HRT1YOL133W URA5P13298 226 aaKnown RBP2.32□□□□□ -2.04
HRT1YOL133W BET1P22804 142 aa2.32□□□□□ -2.04
HRT1YOL133W VMA22P38784 181 aa2.32□□□□□ -2.04
HRT1YOL133W YOL160WQ08321 113 aa2.32□□□□□ -2.04
HRT1YOL133W YIL177CP40434 1758 aa2.31□□□□□ -2.04
HRT1YOL133W YJL225CP40889 1758 aa2.31□□□□□ -2.04
HRT1YOL133W RPL2AP0CX45 254 aaKnown RBP2.31□□□□□ -2.04
HRT1YOL133W RPL2BP0CX46 254 aaKnown RBP2.31□□□□□ -2.04
HRT1YOL133W SHE2P36068 246 aaKnown RBP RIP-Chip data2.31□□□□□ -2.04not detected
HRT1YOL133W SKG1P36169 355 aa2.31□□□□□ -2.04
HRT1YOL133W ABP140Q08641 628 aaKnown RBP2.31□□□□□ -2.04
HRT1YOL133W ATG40Q99325 256 aa2.31□□□□□ -2.04
HRT1YOL133W QCR7P00128 127 aa2.3□□□□□ -2.04
HRT1YOL133W SIR2P06700 562 aa2.3□□□□□ -2.04
HRT1YOL133W CPA1P07258 411 aaKnown RBP2.3□□□□□ -2.04
HRT1YOL133W YOL162WP0CF19 215 aa2.3□□□□□ -2.04
HRT1YOL133W NOP19P53317 196 aaPredicted RBP2.3□□□□□ -2.04
HRT1YOL133W MRPS17Q03246 237 aaPredicted RBP2.3□□□□□ -2.04
HRT1YOL133W ANT1Q06497 328 aa2.3□□□□□ -2.04
HRT1YOL133W FLO9P39712 1322 aa2.3□□□□□ -2.04
HRT1YOL133W RPL27AP0C2H6 136 aaKnown RBP2.29□□□□□ -2.04
HRT1YOL133W YBR285WP38354 144 aa2.29□□□□□ -2.04
HRT1YOL133W RPL13BP40212 199 aaKnown RBP2.29□□□□□ -2.04
HRT1YOL133W YDR274CP87283 123 aa2.29□□□□□ -2.04
HRT1YOL133W CWC21Q03375 135 aaKnown RBP2.29□□□□□ -2.04
HRT1YOL133W RPL13AQ12690 199 aaPredicted RBP2.29□□□□□ -2.04
HRT1YOL133W RPL25P04456 142 aaKnown RBP2.28□□□□□ -2.04
HRT1YOL133W CNB1P25296 175 aa2.28□□□□□ -2.04
HRT1YOL133W TRM5P38793 499 aa2.28□□□□□ -2.04
HRT1YOL133W HMF1P40037 129 aaKnown RBP2.28□□□□□ -2.04
HRT1YOL133W RFC4P40339 323 aaKnown RBP2.28□□□□□ -2.04
HRT1YOL133W EAF6P47128 113 aa2.28□□□□□ -2.04
HRT1YOL133W YMR226CQ05016 267 aaKnown RBP2.28□□□□□ -2.04
HRT1YOL133W IKI3Q06706 1349 aaKnown RBP2.27□□□□□ -2.05
HRT1YOL133W MATALPHA2P0CY08 210 aa2.27□□□□□ -2.05
HRT1YOL133W HMLALPHA2P0CY09 210 aa2.27□□□□□ -2.05
HRT1YOL133W OCH1P31755 480 aa2.27□□□□□ -2.05
HRT1YOL133W TMA19P35691 167 aaKnown RBP2.27□□□□□ -2.05
HRT1YOL133W KNH1P50112 268 aa2.27□□□□□ -2.05
HRT1YOL133W MPC3P53311 146 aa2.27□□□□□ -2.05
HRT1YOL133W YRA1Q12159 226 aaKnown RBP2.27□□□□□ -2.05
HRT1YOL133W YLR236CA0A023PZG4 107 aa2.26□□□□□ -2.05
HRT1YOL133W CBF1P17106 351 aa2.26□□□□□ -2.05
HRT1YOL133W ASF2P32448 525 aaPredicted RBP2.26□□□□□ -2.05
HRT1YOL133W KDX1P36005 433 aa2.26□□□□□ -2.05
HRT1YOL133W YBR209WP38311 105 aa2.26□□□□□ -2.05
HRT1YOL133W AIM25P47140 327 aa2.26□□□□□ -2.05
HRT1YOL133W NUP49Q02199 472 aa2.26□□□□□ -2.05
HRT1YOL133W GET4Q12125 312 aa2.26□□□□□ -2.05
HRT1YOL133W UBR2Q07963 1872 aa2.26□□□□□ -2.05
HRT1YOL133W MZM1Q03429 123 aaPredicted RBP2.25□□□□□ -2.05
HRT1YOL133W MRS1P07266 363 aa2.24□□□□□ -2.05
HRT1YOL133W TFC1P32367 649 aa2.24□□□□□ -2.05
HRT1YOL133W OPY1P38271 328 aa2.24□□□□□ -2.05
HRT1YOL133W ERJ5P43613 295 aaPredicted RBP2.24□□□□□ -2.05
HRT1YOL133W GET1P53192 235 aa2.24□□□□□ -2.05
HRT1YOL133W HNT1Q04344 158 aaKnown RBP2.24□□□□□ -2.05
HRT1YOL133W MDM32Q12171 622 aa2.24□□□□□ -2.05
HRT1YOL133W ODC2Q99297 307 aa2.23□□□□□ -2.05
HRT1YOL133W FPR1P20081 114 aaKnown RBP2.22□□□□□ -2.05
HRT1YOL133W FMP23P38231 175 aa2.22□□□□□ -2.05
HRT1YOL133W YER034WP40022 185 aaKnown RBP2.22□□□□□ -2.05
HRT1YOL133W SKI6P46948 246 aaPredicted RBP2.22□□□□□ -2.05
HRT1YOL133W SAY1P53324 424 aa2.22□□□□□ -2.05
HRT1YOL133W ARO80Q04052 950 aa2.22□□□□□ -2.05
HRT1YOL133W GPA2P10823 449 aa2.21□□□□□ -2.06
HRT1YOL133W SEC11P15367 167 aa2.21□□□□□ -2.06
HRT1YOL133W CKS1P20486 150 aaKnown RBP2.21□□□□□ -2.06
HRT1YOL133W SPO13P23624 291 aa2.21□□□□□ -2.06
HRT1YOL133W ARP3P47117 449 aaKnown RBP2.21□□□□□ -2.06
HRT1YOL133W UBC12P52491 188 aa2.21□□□□□ -2.06
HRT1YOL133W MMS2P53152 137 aa2.21□□□□□ -2.06
HRT1YOL133W MET5P47169 1442 aa2.2□□□□□ -2.06
HRT1YOL133W APA2P22108 325 aa2.2□□□□□ -2.06
HRT1YOL133W ADE1P27616 306 aa2.2□□□□□ -2.06
HRT1YOL133W FAS1P07149 2051 aaKnown RBP2.2□□□□□ -2.06
HRT1YOL133W MBF1O14467 151 aaKnown RBP2.19□□□□□ -2.06
HRT1YOL133W POR1P04840 283 aaKnown RBP2.19□□□□□ -2.06
HRT1YOL133W YPK2P18961 677 aa2.19□□□□□ -2.06
HRT1YOL133W YEA4P40004 342 aa2.19□□□□□ -2.06
HRT1YOL133W YNL184CP53876 108 aa2.19□□□□□ -2.06
HRT1YOL133W SER2P42941 309 aa2.18□□□□□ -2.06
HRT1YOL133W CGR1P53188 120 aa2.18□□□□□ -2.06
HRT1YOL133W RIO1Q12196 484 aaKnown RBP2.18□□□□□ -2.06
HRT1YOL133W PHO85P17157 305 aa2.17□□□□□ -2.06
HRT1YOL133W PAN3P36102 679 aaPredicted RBP2.17□□□□□ -2.06
HRT1YOL133W YER076CP40049 302 aa2.17□□□□□ -2.06
HRT1YOL133W MPA43P53583 542 aaPredicted RBP2.17□□□□□ -2.06
HRT1YOL133W CUE4Q04201 117 aaPredicted RBP2.17□□□□□ -2.06
HRT1YOL133W DGA1Q08650 418 aa2.17□□□□□ -2.06
HRT1YOL133W RAD28Q12021 506 aa2.17□□□□□ -2.06
HRT1YOL133W YCR090CP25654 182 aaKnown RBP2.16□□□□□ -2.06
HRT1YOL133W YJR111CP47148 283 aaKnown RBP2.16□□□□□ -2.06
HRT1YOL133W NAT3Q06504 195 aa2.16□□□□□ -2.06
HRT1YOL133W QCR8P08525 94 aa2.15□□□□□ -2.07
HRT1YOL133W YAR023CD6VPM8 179 aa2.14□□□□□ -2.07
HRT1YOL133W ARO8P53090 500 aaKnown RBP2.14□□□□□ -2.07
HRT1YOL133W YDL180WQ12301 547 aa2.14□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 117.5 ms