RNA–Protein interactions for RNA: YMR247C

RKR1, Transcript of RING domain E3 ubiquitin ligase, yeastyeast

Gene RKR1, Length 4,689 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RKR1YMR247C ALB1P47019 175 aaPredicted RBP0.63□□□□□ -2.31
RKR1YMR247C YGL235WP53071 178 aa0.63□□□□□ -2.31
RKR1YMR247C MRS2Q01926 470 aa0.63□□□□□ -2.31
RKR1YMR247C SWP1Q02795 286 aa0.63□□□□□ -2.31
RKR1YMR247C RRN5Q02983 363 aa0.63□□□□□ -2.31
RKR1YMR247C GRH1Q04410 372 aaKnown RBP0.63□□□□□ -2.31
RKR1YMR247C YML096WQ04489 525 aa0.63□□□□□ -2.31
RKR1YMR247C GTO3Q04806 366 aa0.63□□□□□ -2.31
RKR1YMR247C FUS2Q05670 677 aa0.63□□□□□ -2.31
RKR1YMR247C YOR186WQ08560 144 aa0.63□□□□□ -2.31
RKR1YMR247C AGC1Q12482 902 aa0.63□□□□□ -2.31
RKR1YMR247C TSC3Q3E790 80 aa0.63□□□□□ -2.31
RKR1YMR247C BEM2P39960 2167 aaKnown RBP0.63□□□□□ -2.31
RKR1YMR247C STT4P37297 1900 aa0.63□□□□□ -2.31
RKR1YMR247C YOL162WP0CF19 215 aa0.63□□□□□ -2.31
RKR1YMR247C NSP1P14907 823 aaKnown RBP0.63□□□□□ -2.31
RKR1YMR247C APA2P22108 325 aa0.63□□□□□ -2.31
RKR1YMR247C NTG1P31378 399 aa0.63□□□□□ -2.31
RKR1YMR247C NUF2P33895 451 aa0.63□□□□□ -2.31
RKR1YMR247C RCN1P36054 211 aa0.63□□□□□ -2.31
RKR1YMR247C PHO88P38264 188 aaPredicted RBP0.63□□□□□ -2.31
RKR1YMR247C BAT2P47176 376 aaKnown RBP0.63□□□□□ -2.31
RKR1YMR247C SBH2P52871 88 aa0.63□□□□□ -2.31
RKR1YMR247C YNL134CP53912 376 aaKnown RBP0.63□□□□□ -2.31
RKR1YMR247C RGM1Q00453 211 aa0.63□□□□□ -2.31
RKR1YMR247C SNZ1Q03148 297 aa0.63□□□□□ -2.31
RKR1YMR247C YMR253CQ04835 414 aa0.63□□□□□ -2.31
RKR1YMR247C YLR036CQ07986 203 aa0.63□□□□□ -2.31
RKR1YMR247C YPL278CQ08990 100 aa0.63□□□□□ -2.31
RKR1YMR247C COS2P0CX12 379 aa0.63□□□□□ -2.31
RKR1YMR247C COS3P0CX13 379 aa0.63□□□□□ -2.31
RKR1YMR247C POF1P25576 258 aa0.63□□□□□ -2.31
RKR1YMR247C SGE1P33335 543 aa0.63□□□□□ -2.31
RKR1YMR247C APS1P35181 156 aa0.63□□□□□ -2.31
RKR1YMR247C PGD1P40356 397 aa0.63□□□□□ -2.31
RKR1YMR247C RPL33BP41056 107 aaKnown RBP0.63□□□□□ -2.31
RKR1YMR247C NOP13P53883 403 aaKnown RBP RIP-Chip data0.63□□□□□ -2.31not detected
RKR1YMR247C CWC27Q02770 301 aa0.63□□□□□ -2.31
RKR1YMR247C MDM32Q12171 622 aa0.63□□□□□ -2.31
RKR1YMR247C YBL008W-AQ3E821 79 aa0.63□□□□□ -2.31
RKR1YMR247C ATG40Q99325 256 aa0.63□□□□□ -2.31
RKR1YMR247C CCH1P50077 2039 aa0.63□□□□□ -2.31
RKR1YMR247C FLO1P32768 1537 aa0.62□□□□□ -2.31
RKR1YMR247C COX5AP00424 153 aa0.62□□□□□ -2.31
RKR1YMR247C SCL1P21243 252 aaKnown RBP0.62□□□□□ -2.31
RKR1YMR247C MAK31P23059 88 aa0.62□□□□□ -2.31
RKR1YMR247C YCR090CP25654 182 aaKnown RBP0.62□□□□□ -2.31
RKR1YMR247C OAC1P32332 324 aa0.62□□□□□ -2.31
RKR1YMR247C UPS2P35200 230 aa0.62□□□□□ -2.31
RKR1YMR247C YHR125WP38831 101 aa0.62□□□□□ -2.31
RKR1YMR247C YER134CP40081 178 aa0.62□□□□□ -2.31
RKR1YMR247C TIR3P40552 269 aa0.62□□□□□ -2.31
RKR1YMR247C YAE1P47118 141 aaPredicted RBP0.62□□□□□ -2.31
RKR1YMR247C PEX31P53203 462 aa0.62□□□□□ -2.31
RKR1YMR247C SWS2P53937 143 aa0.62□□□□□ -2.31
RKR1YMR247C LAP3Q01532 483 aaKnown RBP RIP-Chip data0.62□□□□□ -2.31not detected
RKR1YMR247C RCE1Q03530 315 aa0.62□□□□□ -2.31
RKR1YMR247C YPD1Q07688 167 aa0.62□□□□□ -2.31
RKR1YMR247C YLR412C-AQ3E742 68 aa0.62□□□□□ -2.31
RKR1YMR247C ODC2Q99297 307 aa0.62□□□□□ -2.31
RKR1YMR247C YKR104WP0CE69 306 aa0.62□□□□□ -2.31
RKR1YMR247C RPS23AP0CX29 145 aaKnown RBP0.62□□□□□ -2.31
RKR1YMR247C RPS23BP0CX30 145 aa0.62□□□□□ -2.31
RKR1YMR247C KSS1P14681 368 aa0.62□□□□□ -2.31
RKR1YMR247C CKS1P20486 150 aaKnown RBP0.62□□□□□ -2.31
RKR1YMR247C ATG22P25568 528 aa0.62□□□□□ -2.31
RKR1YMR247C YCR016WP25617 290 aaKnown RBP0.62□□□□□ -2.31
RKR1YMR247C MGM101P32787 269 aaKnown RBP0.62□□□□□ -2.31
RKR1YMR247C VPS51P36116 164 aa0.62□□□□□ -2.31
RKR1YMR247C PGU1P47180 361 aa0.62□□□□□ -2.31
RKR1YMR247C AIF1P52923 378 aa0.62□□□□□ -2.31
RKR1YMR247C ERV29P53337 310 aa0.62□□□□□ -2.31
RKR1YMR247C POP3P53833 195 aaPredicted RBP0.62□□□□□ -2.31
RKR1YMR247C NUP49Q02199 472 aa0.62□□□□□ -2.31
RKR1YMR247C SPG3Q04398 127 aaPredicted RBP0.62□□□□□ -2.31
RKR1YMR247C SEI1Q06058 285 aa0.62□□□□□ -2.31
RKR1YMR247C SUE1Q06524 206 aa0.62□□□□□ -2.31
RKR1YMR247C HEM25Q07534 307 aa0.62□□□□□ -2.31
RKR1YMR247C MIM1Q08176 113 aa0.62□□□□□ -2.31
RKR1YMR247C SAL1D6W196 494 aa0.62□□□□□ -2.31
RKR1YMR247C CDC7P06243 507 aa0.62□□□□□ -2.31
RKR1YMR247C POL30P15873 258 aaKnown RBP0.62□□□□□ -2.31
RKR1YMR247C VMA22P38784 181 aa0.62□□□□□ -2.31
RKR1YMR247C SRP14P38985 146 aa0.62□□□□□ -2.31
RKR1YMR247C YNL217WP40152 326 aa0.62□□□□□ -2.31
RKR1YMR247C FLX1P40464 311 aa0.62□□□□□ -2.31
RKR1YMR247C YJL028WP47062 111 aa0.62□□□□□ -2.31
RKR1YMR247C DOC1P53068 250 aa0.62□□□□□ -2.31
RKR1YMR247C COG5P53951 403 aa0.62□□□□□ -2.31
RKR1YMR247C PSF1Q12488 208 aa0.62□□□□□ -2.31
RKR1YMR247C ROM2P51862 1356 aaKnown RBP0.62□□□□□ -2.31
RKR1YMR247C CDC33P07260 213 aaKnown RBP0.62□□□□□ -2.31
RKR1YMR247C DDI2P0CH63 225 aa0.62□□□□□ -2.31
RKR1YMR247C DDI3P0CH64 225 aa0.62□□□□□ -2.31
RKR1YMR247C GPA2P10823 449 aa0.62□□□□□ -2.31
RKR1YMR247C FCY2P17064 533 aa0.62□□□□□ -2.31
RKR1YMR247C GRX2P17695 143 aaKnown RBP0.62□□□□□ -2.31
RKR1YMR247C YBR063CP38083 404 aa0.62□□□□□ -2.31
RKR1YMR247C FMP33P46998 180 aa0.62□□□□□ -2.31
RKR1YMR247C CIS3P47001 227 aa0.62□□□□□ -2.31
Retrieved 100 of 5,963 RNA–protein pairs in 111.9 ms