RNA–Protein interactions for RNA: YMR117C

SPC24, Transcript of Component of the kinetochore-associated Ndc80 complex, yeastyeast

Gene SPC24, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC24YMR117C TRM5P38793 499 aa2.31□□□□□ -2.04
SPC24YMR117C ERJ5P43613 295 aaPredicted RBP2.31□□□□□ -2.04
SPC24YMR117C RIO1Q12196 484 aaKnown RBP2.31□□□□□ -2.04
SPC24YMR117C PET191Q02772 108 aa2.3□□□□□ -2.04
SPC24YMR117C RPB3P16370 318 aaKnown RBP2.29□□□□□ -2.04
SPC24YMR117C YCR087C-AP37263 153 aa2.29□□□□□ -2.04
SPC24YMR117C IKI1P38874 309 aa2.29□□□□□ -2.04
SPC24YMR117C COG5P53951 403 aa2.29□□□□□ -2.04
SPC24YMR117C TIM11P81449 96 aaPredicted RBP2.29□□□□□ -2.04
SPC24YMR117C MDM32Q12171 622 aa2.29□□□□□ -2.04
SPC24YMR117C GIS3Q12418 502 aa2.29□□□□□ -2.04
SPC24YMR117C YFR032C-BQ8TGU2 87 aa2.29□□□□□ -2.04
SPC24YMR117C QCR8P08525 94 aa2.28□□□□□ -2.04
SPC24YMR117C MER1P16523 270 aa2.28□□□□□ -2.04
SPC24YMR117C SPS18P32572 300 aa2.28□□□□□ -2.04
SPC24YMR117C TAF14P35189 244 aa2.28□□□□□ -2.04
SPC24YMR117C POP3P53833 195 aaPredicted RBP2.28□□□□□ -2.04
SPC24YMR117C HMF1P40037 129 aaKnown RBP2.27□□□□□ -2.05
SPC24YMR117C CUS2P53830 285 aaPredicted RBP2.27□□□□□ -2.05
SPC24YMR117C YDR274CP87283 123 aa2.27□□□□□ -2.05
SPC24YMR117C CYR1P08678 2026 aaKnown RBP2.26□□□□□ -2.05
SPC24YMR117C RPB4P20433 221 aaPredicted RBP2.26□□□□□ -2.05
SPC24YMR117C CKS1P20486 150 aaKnown RBP2.26□□□□□ -2.05
SPC24YMR117C NTG1P31378 399 aa2.26□□□□□ -2.05
SPC24YMR117C TVP38P36164 337 aa2.26□□□□□ -2.05
SPC24YMR117C KNH1P50112 268 aa2.26□□□□□ -2.05
SPC24YMR117C YNG1Q08465 219 aa2.26□□□□□ -2.05
SPC24YMR117C YDL180WQ12301 547 aa2.26□□□□□ -2.05
SPC24YMR117C YLR236CA0A023PZG4 107 aa2.25□□□□□ -2.05
SPC24YMR117C SIR2P06700 562 aa2.25□□□□□ -2.05
SPC24YMR117C CPA1P07258 411 aaKnown RBP2.25□□□□□ -2.05
SPC24YMR117C ATP15P21306 62 aa2.25□□□□□ -2.05
SPC24YMR117C RFA3P26755 122 aaKnown RBP2.24□□□□□ -2.05
SPC24YMR117C CUE4Q04201 117 aaPredicted RBP2.23□□□□□ -2.05
SPC24YMR117C YOL160WQ08321 113 aa2.23□□□□□ -2.05
SPC24YMR117C IKI3Q06706 1349 aaKnown RBP2.22□□□□□ -2.05
SPC24YMR117C HTB1P02293 131 aaKnown RBP2.22□□□□□ -2.05
SPC24YMR117C HTB2P02294 131 aa2.22□□□□□ -2.05
SPC24YMR117C MPA43P53583 542 aaPredicted RBP2.22□□□□□ -2.05
SPC24YMR117C YMR226CQ05016 267 aaKnown RBP2.22□□□□□ -2.05
SPC24YMR117C RPL27AP0C2H6 136 aaKnown RBP2.21□□□□□ -2.06
SPC24YMR117C AIM25P47140 327 aa2.21□□□□□ -2.06
SPC24YMR117C HNT1Q04344 158 aaKnown RBP2.21□□□□□ -2.06
SPC24YMR117C KDX1P36005 433 aa2.2□□□□□ -2.06
SPC24YMR117C OPY1P38271 328 aa2.2□□□□□ -2.06
SPC24YMR117C YER076CP40049 302 aa2.2□□□□□ -2.06
SPC24YMR117C YRA1Q12159 226 aaKnown RBP2.2□□□□□ -2.06
SPC24YMR117C CDC36P06100 191 aaPredicted RBP2.19□□□□□ -2.06
SPC24YMR117C SEC11P15367 167 aa2.19□□□□□ -2.06
SPC24YMR117C RAD28Q12021 506 aa2.19□□□□□ -2.06
SPC24YMR117C ODC2Q99297 307 aa2.19□□□□□ -2.06
SPC24YMR117C RFC4P40339 323 aaKnown RBP2.18□□□□□ -2.06
SPC24YMR117C UBC7Q02159 165 aa2.18□□□□□ -2.06
SPC24YMR117C GGA1Q06336 557 aa2.18□□□□□ -2.06
SPC24YMR117C MSB2P32334 1306 aa2.17□□□□□ -2.06
SPC24YMR117C OCH1P31755 480 aa2.17□□□□□ -2.06
SPC24YMR117C YKT6P36015 200 aaKnown RBP2.17□□□□□ -2.06
SPC24YMR117C ERG10P41338 398 aaKnown RBP2.17□□□□□ -2.06
SPC24YMR117C CBF1P17106 351 aa2.16□□□□□ -2.06
SPC24YMR117C YCR090CP25654 182 aaKnown RBP2.16□□□□□ -2.06
SPC24YMR117C YER034WP40022 185 aaKnown RBP2.16□□□□□ -2.06
SPC24YMR117C FUS2Q05670 677 aa2.16□□□□□ -2.06
SPC24YMR117C YNL146C-AQ3E7Z1 64 aa2.16□□□□□ -2.06
SPC24YMR117C VMA22P38784 181 aa2.15□□□□□ -2.07
SPC24YMR117C RIO2P40160 425 aaKnown RBP2.15□□□□□ -2.07
SPC24YMR117C MRPS17Q03246 237 aaPredicted RBP2.15□□□□□ -2.07
SPC24YMR117C MATALPHA2P0CY08 210 aa2.14□□□□□ -2.07
SPC24YMR117C HMLALPHA2P0CY09 210 aa2.14□□□□□ -2.07
SPC24YMR117C CNB1P25296 175 aa2.14□□□□□ -2.07
SPC24YMR117C PAN3P36102 679 aaPredicted RBP2.14□□□□□ -2.07
SPC24YMR117C GET1P53192 235 aa2.14□□□□□ -2.07
SPC24YMR117C MPC3P53311 146 aa2.14□□□□□ -2.07
SPC24YMR117C CWC21Q03375 135 aaKnown RBP2.14□□□□□ -2.07
SPC24YMR117C YHR007C-AQ07074 71 aa2.14□□□□□ -2.07
SPC24YMR117C SPO13P23624 291 aa2.13□□□□□ -2.07
SPC24YMR117C TVP23P38962 199 aa2.13□□□□□ -2.07
SPC24YMR117C AIM2P39721 246 aa2.13□□□□□ -2.07
SPC24YMR117C MMS2P53152 137 aa2.13□□□□□ -2.07
SPC24YMR117C CGR1P53188 120 aa2.13□□□□□ -2.07
SPC24YMR117C MBF1O14467 151 aaKnown RBP2.12□□□□□ -2.07
SPC24YMR117C POR1P04840 283 aaKnown RBP2.12□□□□□ -2.07
SPC24YMR117C ASF2P32448 525 aaPredicted RBP2.12□□□□□ -2.07
SPC24YMR117C ECM4P36156 370 aa2.12□□□□□ -2.07
SPC24YMR117C SKI6P46948 246 aaPredicted RBP2.12□□□□□ -2.07
SPC24YMR117C ABP140Q08641 628 aaKnown RBP2.12□□□□□ -2.07
SPC24YMR117C DGA1Q08650 418 aa2.12□□□□□ -2.07
SPC24YMR117C GET4Q12125 312 aa2.12□□□□□ -2.07
SPC24YMR117C YCL012CQ8J0M4 134 aa2.12□□□□□ -2.07
SPC24YMR117C VAR1P02381 398 aa2.11□□□□□ -2.07
SPC24YMR117C MRS1P07266 363 aa2.11□□□□□ -2.07
SPC24YMR117C YEA4P40004 342 aa2.11□□□□□ -2.07
SPC24YMR117C RCE1Q03530 315 aa2.11□□□□□ -2.07
SPC24YMR117C DYN3Q04949 312 aa2.11□□□□□ -2.07
SPC24YMR117C FLX1P40464 311 aa2.1□□□□□ -2.07
SPC24YMR117C YAE1P47118 141 aaPredicted RBP2.1□□□□□ -2.07
SPC24YMR117C ARO8P53090 500 aaKnown RBP2.1□□□□□ -2.07
SPC24YMR117C YPR174CQ06616 221 aaPredicted RBP2.1□□□□□ -2.07
SPC24YMR117C ADF1Q2V2Q1 113 aa2.1□□□□□ -2.07
SPC24YMR117C YPK2P18961 677 aa2.09□□□□□ -2.07
SPC24YMR117C YER134CP40081 178 aa2.09□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 54 ms