RNA–Protein interactions for RNA: YJR028W

YJR028W, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YJR028W, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YJR028WYJR028W FMP23P38231 175 aa2.93□□□□□ -1.94
YJR028WYJR028W PDS1P40316 373 aaPredicted RBP2.93□□□□□ -1.94
YJR028WYJR028W FUS2Q05670 677 aa2.93□□□□□ -1.94
YJR028WYJR028W YOL024WQ08172 172 aa2.93□□□□□ -1.94
YJR028WYJR028W CMC2Q3E7A4 109 aa2.93□□□□□ -1.94
YJR028WYJR028W URA5P13298 226 aaKnown RBP2.92□□□□□ -1.94
YJR028WYJR028W MDH3P32419 343 aaKnown RBP RIP-Chip data2.92□□□□□ -1.94not detected
YJR028WYJR028W CLG1P35190 452 aa2.92□□□□□ -1.94
YJR028WYJR028W CGI121Q03705 181 aaKnown RBP2.92□□□□□ -1.94
YJR028WYJR028W RIO1Q12196 484 aaKnown RBP2.92□□□□□ -1.94
YJR028WYJR028W TSC3Q3E790 80 aa2.92□□□□□ -1.94
YJR028WYJR028W FBA1P14540 359 aaKnown RBP2.91□□□□□ -1.94
YJR028WYJR028W YCR090CP25654 182 aaKnown RBP2.91□□□□□ -1.94
YJR028WYJR028W GLE2P40066 365 aa2.91□□□□□ -1.94
YJR028WYJR028W ARP3P47117 449 aaKnown RBP2.91□□□□□ -1.94
YJR028WYJR028W DOC1P53068 250 aa2.91□□□□□ -1.94
YJR028WYJR028W YGR219WP53307 113 aa2.91□□□□□ -1.94
YJR028WYJR028W YNR062CP53748 327 aa2.91□□□□□ -1.94
YJR028WYJR028W ATO3Q12359 275 aa2.91□□□□□ -1.94
YJR028WYJR028W PGD1P40356 397 aa2.9□□□□□ -1.95
YJR028WYJR028W SKI6P46948 246 aaPredicted RBP2.9□□□□□ -1.95
YJR028WYJR028W YNL140CP53910 189 aa2.9□□□□□ -1.95
YJR028WYJR028W YLR460CP54007 376 aa2.9□□□□□ -1.95
YJR028WYJR028W DAD3P69850 94 aa2.9□□□□□ -1.95
YJR028WYJR028W MRPS8Q03799 155 aa2.9□□□□□ -1.95
YJR028WYJR028W YDL085C-AQ3E7B7 68 aaKnown RBP2.9□□□□□ -1.95
YJR028WYJR028W SNF4P12904 322 aa2.89□□□□□ -1.95
YJR028WYJR028W OCH1P31755 480 aa2.89□□□□□ -1.95
YJR028WYJR028W MAK5P38112 773 aaPredicted RBP2.89□□□□□ -1.95
YJR028WYJR028W UMP1P38293 148 aa2.89□□□□□ -1.95
YJR028WYJR028W GVP36P40531 326 aaKnown RBP2.89□□□□□ -1.95
YJR028WYJR028W ARO8P53090 500 aaKnown RBP2.89□□□□□ -1.95
YJR028WYJR028W YNL247WP53852 767 aaKnown RBP2.89□□□□□ -1.95
YJR028WYJR028W HNT1Q04344 158 aaKnown RBP2.89□□□□□ -1.95
YJR028WYJR028W YMR315WQ04869 349 aaKnown RBP2.89□□□□□ -1.95
YJR028WYJR028W SCL1P21243 252 aaKnown RBP2.88□□□□□ -1.95
YJR028WYJR028W PEX4P29340 183 aa2.88□□□□□ -1.95
YJR028WYJR028W TRR1P29509 319 aaKnown RBP2.88□□□□□ -1.95
YJR028WYJR028W ARC19P33204 171 aaKnown RBP2.88□□□□□ -1.95
YJR028WYJR028W VPS51P36116 164 aa2.88□□□□□ -1.95
YJR028WYJR028W YJR111CP47148 283 aaKnown RBP2.88□□□□□ -1.95
YJR028WYJR028W PRM15Q03262 622 aa2.88□□□□□ -1.95
YJR028WYJR028W YLR036CQ07986 203 aa2.88□□□□□ -1.95
YJR028WYJR028W CKS1P20486 150 aaKnown RBP2.87□□□□□ -1.95
YJR028WYJR028W MRPS28P21771 286 aa2.87□□□□□ -1.95
YJR028WYJR028W ARO7P32178 256 aa2.87□□□□□ -1.95
YJR028WYJR028W SRP14P38985 146 aa2.87□□□□□ -1.95
YJR028WYJR028W RPL33BP41056 107 aaKnown RBP2.87□□□□□ -1.95
YJR028WYJR028W MEU1Q07938 337 aaKnown RBP RIP-Chip data2.87□□□□□ -1.95not detected
YJR028WYJR028W RAS2P01120 322 aaKnown RBP2.86□□□□□ -1.95
YJR028WYJR028W TRX3P25372 127 aa2.86□□□□□ -1.95
YJR028WYJR028W FCY21P40039 528 aa2.86□□□□□ -1.95
YJR028WYJR028W YER121WP40076 114 aa2.86□□□□□ -1.95
YJR028WYJR028W YKE4P40544 346 aa2.86□□□□□ -1.95
YJR028WYJR028W CIS3P47001 227 aa2.86□□□□□ -1.95
YJR028WYJR028W FSF1Q12029 327 aaKnown RBP2.86□□□□□ -1.95
YJR028WYJR028W YOR283WQ12040 230 aaKnown RBP2.86□□□□□ -1.95
YJR028WYJR028W AHC2P25649 128 aa2.85□□□□□ -1.95
YJR028WYJR028W MGT1P26188 188 aa2.85□□□□□ -1.95
YJR028WYJR028W PHO88P38264 188 aaPredicted RBP2.85□□□□□ -1.95
YJR028WYJR028W OPY1P38271 328 aa2.85□□□□□ -1.95
YJR028WYJR028W ERV15P38312 142 aa2.85□□□□□ -1.95
YJR028WYJR028W SER2P42941 309 aa2.85□□□□□ -1.95
YJR028WYJR028W DAN1P47178 298 aa2.85□□□□□ -1.95
YJR028WYJR028W YLR031WQ07978 186 aa2.85□□□□□ -1.95
YJR028WYJR028W YIL177CP40434 1758 aa2.85□□□□□ -1.95
YJR028WYJR028W YJL225CP40889 1758 aa2.85□□□□□ -1.95
YJR028WYJR028W SNC2P33328 115 aa2.84□□□□□ -1.96
YJR028WYJR028W SVP26P38869 228 aa2.84□□□□□ -1.96
YJR028WYJR028W NVJ1P38881 321 aa2.84□□□□□ -1.96
YJR028WYJR028W YER076CP40049 302 aa2.84□□□□□ -1.96
YJR028WYJR028W FMP32P43557 207 aa2.84□□□□□ -1.96
YJR028WYJR028W TDA4P47153 279 aa2.84□□□□□ -1.96
YJR028WYJR028W BOL2P53082 120 aa2.84□□□□□ -1.96
YJR028WYJR028W YDR274CP87283 123 aa2.84□□□□□ -1.96
YJR028WYJR028W RGM1Q00453 211 aa2.84□□□□□ -1.96
YJR028WYJR028W BRX1Q08235 291 aaKnown RBP2.84□□□□□ -1.96
YJR028WYJR028W KDX1P36005 433 aa2.83□□□□□ -1.96
YJR028WYJR028W YEA4P40004 342 aa2.83□□□□□ -1.96
YJR028WYJR028W TIR3P40552 269 aa2.83□□□□□ -1.96
YJR028WYJR028W YJL027CP47063 138 aaPredicted RBP2.83□□□□□ -1.96
YJR028WYJR028W YNR077CP53758 84 aa2.83□□□□□ -1.96
YJR028WYJR028W PGA1P53896 198 aa2.83□□□□□ -1.96
YJR028WYJR028W DGA1Q08650 418 aa2.83□□□□□ -1.96
YJR028WYJR028W ODC2Q99297 307 aa2.83□□□□□ -1.96
YJR028WYJR028W FES1P38260 290 aa2.82□□□□□ -1.96
YJR028WYJR028W YBR285WP38354 144 aa2.82□□□□□ -1.96
YJR028WYJR028W LSM4P40070 187 aaKnown RBP2.82□□□□□ -1.96
YJR028WYJR028W AIM34Q03673 198 aa2.82□□□□□ -1.96
YJR028WYJR028W NAT3Q06504 195 aa2.82□□□□□ -1.96
YJR028WYJR028W YLR050CQ12155 161 aaKnown RBP2.82□□□□□ -1.96
YJR028WYJR028W PDR18P53756 1333 aa2.81□□□□□ -1.96
YJR028WYJR028W DDI2P0CH63 225 aa2.81□□□□□ -1.96
YJR028WYJR028W DDI3P0CH64 225 aa2.81□□□□□ -1.96
YJR028WYJR028W YET1P35723 206 aa2.81□□□□□ -1.96
YJR028WYJR028W SHE2P36068 246 aaKnown RBP RIP-Chip data2.81□□□□□ -1.96not detected
YJR028WYJR028W CPA1P07258 411 aaKnown RBP2.8□□□□□ -1.96
YJR028WYJR028W RPS24AP0CX31 135 aaKnown RBP2.8□□□□□ -1.96
YJR028WYJR028W RPS24BP0CX32 135 aaKnown RBP2.8□□□□□ -1.96
YJR028WYJR028W PAN3P36102 679 aaPredicted RBP2.8□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 27.9 ms