RNA–Protein interactions for RNA: YJL061W

NUP82, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeast

Gene NUP82, Length 2,142 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP82	YJL061W	YJL225C	P40889	1758 aa		1.12	□□□□□ -2.23
NUP82	YJL061W	RPL2A	P0CX45	254 aa	Known RBP	1.12	□□□□□ -2.23
NUP82	YJL061W	RPL2B	P0CX46	254 aa	Known RBP	1.12	□□□□□ -2.23
NUP82	YJL061W	GPA2	P10823	449 aa		1.12	□□□□□ -2.23
NUP82	YJL061W	MER1	P16523	270 aa		1.12	□□□□□ -2.23
NUP82	YJL061W	SPS18	P32572	300 aa		1.12	□□□□□ -2.23
NUP82	YJL061W	UPS2	P35200	230 aa		1.12	□□□□□ -2.23
NUP82	YJL061W	YCR087C-A	P37263	153 aa		1.12	□□□□□ -2.23
NUP82	YJL061W	GLE2	P40066	365 aa		1.12	□□□□□ -2.23
NUP82	YJL061W	ERJ5	P43613	295 aa	Predicted RBP	1.12	□□□□□ -2.23
NUP82	YJL061W	PET191	Q02772	108 aa		1.12	□□□□□ -2.23
NUP82	YJL061W	RPB3	P16370	318 aa	Known RBP	1.11	□□□□□ -2.23
NUP82	YJL061W	CKS1	P20486	150 aa	Known RBP	1.11	□□□□□ -2.23
NUP82	YJL061W	TAF14	P35189	244 aa		1.11	□□□□□ -2.23
NUP82	YJL061W	HMF1	P40037	129 aa	Known RBP	1.11	□□□□□ -2.23
NUP82	YJL061W	YMR226C	Q05016	267 aa	Known RBP	1.11	□□□□□ -2.23
NUP82	YJL061W	RIO1	Q12196	484 aa	Known RBP	1.11	□□□□□ -2.23
NUP82	YJL061W	YFR032C-B	Q8TGU2	87 aa		1.11	□□□□□ -2.23
NUP82	YJL061W	POP3	P53833	195 aa	Predicted RBP	1.1	□□□□□ -2.23
NUP82	YJL061W	NUP49	Q02199	472 aa		1.1	□□□□□ -2.23
NUP82	YJL061W	HTB1	P02293	131 aa	Known RBP	1.1	□□□□□ -2.23
NUP82	YJL061W	HTB2	P02294	131 aa		1.1	□□□□□ -2.23
NUP82	YJL061W	RFA3	P26755	122 aa	Known RBP	1.1	□□□□□ -2.23
NUP82	YJL061W	CUS2	P53830	285 aa	Predicted RBP	1.1	□□□□□ -2.23
NUP82	YJL061W	YDR274C	P87283	123 aa		1.1	□□□□□ -2.23
NUP82	YJL061W	YNG1	Q08465	219 aa		1.1	□□□□□ -2.23
NUP82	YJL061W	CDC36	P06100	191 aa	Predicted RBP	1.09	□□□□□ -2.23
NUP82	YJL061W	SIR2	P06700	562 aa		1.09	□□□□□ -2.23
NUP82	YJL061W	QCR8	P08525	94 aa		1.09	□□□□□ -2.23
NUP82	YJL061W	TVP38	P36164	337 aa		1.09	□□□□□ -2.23
NUP82	YJL061W	KNH1	P50112	268 aa		1.09	□□□□□ -2.23
NUP82	YJL061W	CWC21	Q03375	135 aa	Known RBP	1.09	□□□□□ -2.23
NUP82	YJL061W	YRA1	Q12159	226 aa	Known RBP	1.09	□□□□□ -2.23
NUP82	YJL061W	YDL180W	Q12301	547 aa		1.09	□□□□□ -2.23
NUP82	YJL061W	YLR236C	A0A023PZG4	107 aa		1.09	□□□□□ -2.24
NUP82	YJL061W	ATP15	P21306	62 aa		1.09	□□□□□ -2.24
NUP82	YJL061W	YKT6	P36015	200 aa	Known RBP	1.09	□□□□□ -2.24
NUP82	YJL061W	RFC4	P40339	323 aa	Known RBP	1.09	□□□□□ -2.24
NUP82	YJL061W	MRPS17	Q03246	237 aa	Predicted RBP	1.09	□□□□□ -2.24
NUP82	YJL061W	CUE4	Q04201	117 aa	Predicted RBP	1.09	□□□□□ -2.24
NUP82	YJL061W	HNT1	Q04344	158 aa	Known RBP	1.09	□□□□□ -2.24
NUP82	YJL061W	YOL160W	Q08321	113 aa		1.09	□□□□□ -2.24
NUP82	YJL061W	IKI3	Q06706	1349 aa	Known RBP	1.09	□□□□□ -2.24
NUP82	YJL061W	UBR2	Q07963	1872 aa		1.09	□□□□□ -2.24
NUP82	YJL061W	CPA1	P07258	411 aa	Known RBP	1.08	□□□□□ -2.24
NUP82	YJL061W	AIM25	P47140	327 aa		1.08	□□□□□ -2.24
NUP82	YJL061W	CGR1	P53188	120 aa		1.08	□□□□□ -2.24
NUP82	YJL061W	RPL27A	P0C2H6	136 aa	Known RBP	1.07	□□□□□ -2.24
NUP82	YJL061W	CBF1	P17106	351 aa		1.07	□□□□□ -2.24
NUP82	YJL061W	YCR090C	P25654	182 aa	Known RBP	1.07	□□□□□ -2.24
NUP82	YJL061W	KDX1	P36005	433 aa		1.07	□□□□□ -2.24
NUP82	YJL061W	OPY1	P38271	328 aa		1.07	□□□□□ -2.24
NUP82	YJL061W	GET1	P53192	235 aa		1.07	□□□□□ -2.24
NUP82	YJL061W	FUS2	Q05670	677 aa		1.07	□□□□□ -2.24
NUP82	YJL061W	ODC2	Q99297	307 aa		1.07	□□□□□ -2.24
NUP82	YJL061W	MATALPHA2	P0CY08	210 aa		1.06	□□□□□ -2.24
NUP82	YJL061W	HMLALPHA2	P0CY09	210 aa		1.06	□□□□□ -2.24
NUP82	YJL061W	SEC11	P15367	167 aa		1.06	□□□□□ -2.24
NUP82	YJL061W	ERG10	P41338	398 aa	Known RBP	1.06	□□□□□ -2.24
NUP82	YJL061W	GGA1	Q06336	557 aa		1.06	□□□□□ -2.24
NUP82	YJL061W	RAD28	Q12021	506 aa		1.06	□□□□□ -2.24
NUP82	YJL061W	OCH1	P31755	480 aa		1.06	□□□□□ -2.24
NUP82	YJL061W	ECM4	P36156	370 aa		1.06	□□□□□ -2.24
NUP82	YJL061W	AIM2	P39721	246 aa		1.06	□□□□□ -2.24
NUP82	YJL061W	YER076C	P40049	302 aa		1.06	□□□□□ -2.24
NUP82	YJL061W	MMS2	P53152	137 aa		1.06	□□□□□ -2.24
NUP82	YJL061W	MPA43	P53583	542 aa	Predicted RBP	1.06	□□□□□ -2.24
NUP82	YJL061W	ABP140	Q08641	628 aa	Known RBP	1.06	□□□□□ -2.24
NUP82	YJL061W	GET4	Q12125	312 aa		1.06	□□□□□ -2.24
NUP82	YJL061W	CNB1	P25296	175 aa		1.05	□□□□□ -2.24
NUP82	YJL061W	YER034W	P40022	185 aa	Known RBP	1.05	□□□□□ -2.24
NUP82	YJL061W	ADF1	Q2V2Q1	113 aa		1.05	□□□□□ -2.24
NUP82	YJL061W	ASF2	P32448	525 aa	Predicted RBP	1.04	□□□□□ -2.24
NUP82	YJL061W	PAN3	P36102	679 aa	Predicted RBP	1.04	□□□□□ -2.24
NUP82	YJL061W	UBC7	Q02159	165 aa		1.04	□□□□□ -2.24
NUP82	YJL061W	DYN3	Q04949	312 aa		1.04	□□□□□ -2.24
NUP82	YJL061W	YHR007C-A	Q07074	71 aa		1.04	□□□□□ -2.24
NUP82	YJL061W	YNL146C-A	Q3E7Z1	64 aa		1.04	□□□□□ -2.24
NUP82	YJL061W	YCL012C	Q8J0M4	134 aa		1.04	□□□□□ -2.24
NUP82	YJL061W	MSB2	P32334	1306 aa		1.04	□□□□□ -2.24
NUP82	YJL061W	CYR1	P08678	2026 aa	Known RBP	1.04	□□□□□ -2.24
NUP82	YJL061W	MBF1	O14467	151 aa	Known RBP	1.04	□□□□□ -2.24
NUP82	YJL061W	MRS1	P07266	363 aa		1.04	□□□□□ -2.24
NUP82	YJL061W	SPO13	P23624	291 aa		1.04	□□□□□ -2.24
NUP82	YJL061W	TVP23	P38962	199 aa		1.04	□□□□□ -2.24
NUP82	YJL061W	RIO2	P40160	425 aa	Known RBP	1.04	□□□□□ -2.24
NUP82	YJL061W	SKI6	P46948	246 aa	Predicted RBP	1.04	□□□□□ -2.24
NUP82	YJL061W	POR1	P04840	283 aa	Known RBP	1.03	□□□□□ -2.24
NUP82	YJL061W	YPK2	P18961	677 aa		1.03	□□□□□ -2.24
NUP82	YJL061W	VMA22	P38784	181 aa		1.03	□□□□□ -2.24
NUP82	YJL061W	YEA4	P40004	342 aa		1.03	□□□□□ -2.24
NUP82	YJL061W	YER134C	P40081	178 aa		1.03	□□□□□ -2.24
NUP82	YJL061W	MPC3	P53311	146 aa		1.03	□□□□□ -2.24
NUP82	YJL061W	NOP19	P53317	196 aa	Predicted RBP	1.03	□□□□□ -2.24
NUP82	YJL061W	DGA1	Q08650	418 aa		1.03	□□□□□ -2.24
NUP82	YJL061W	JIP3	O13555	125 aa		1.03	□□□□□ -2.25
NUP82	YJL061W	QCR7	P00128	127 aa		1.03	□□□□□ -2.25
NUP82	YJL061W	SER2	P42941	309 aa		1.03	□□□□□ -2.25
NUP82	YJL061W	RCE1	Q03530	315 aa		1.03	□□□□□ -2.25
NUP82	YJL061W	YPR174C	Q06616	221 aa	Predicted RBP	1.03	□□□□□ -2.25

Retrieved 100 of 5,963 RNA–protein pairs in 77.4 ms