RNA–Protein interactions for RNA: YHR120W

MSH1, Transcript of DNA-binding protein of the mitochondria, yeastyeast

Gene MSH1, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH1YHR120W SGA1P08019 549 aa4.3□□□□□ -1.72
MSH1YHR120W SEC59P20048 519 aa4.3□□□□□ -1.72
MSH1YHR120W PEX4P29340 183 aa4.3□□□□□ -1.72
MSH1YHR120W MTC7P32633 139 aa4.3□□□□□ -1.72
MSH1YHR120W CDS1P38221 457 aa4.3□□□□□ -1.72
MSH1YHR120W POP2P39008 433 aa4.3□□□□□ -1.72
MSH1YHR120W YIL012WP40551 113 aa4.3□□□□□ -1.72
MSH1YHR120W PUS4P48567 403 aaKnown RBP4.3□□□□□ -1.72
MSH1YHR120W NSA1P53136 463 aaPredicted RBP4.3□□□□□ -1.72
MSH1YHR120W YPL077CQ02831 240 aa4.3□□□□□ -1.72
MSH1YHR120W CTR3Q06686 241 aa4.3□□□□□ -1.72
MSH1YHR120W MRX9Q07349 420 aaKnown RBP4.3□□□□□ -1.72
MSH1YHR120W GAT3Q07928 141 aa4.3□□□□□ -1.72
MSH1YHR120W MET3P08536 511 aa4.29□□□□□ -1.72
MSH1YHR120W YKL107WP34251 309 aa4.29□□□□□ -1.72
MSH1YHR120W MRPS9P38120 278 aa4.29□□□□□ -1.72
MSH1YHR120W SLM6P38343 150 aa4.29□□□□□ -1.72
MSH1YHR120W YIL029CP40538 142 aa4.29□□□□□ -1.72
MSH1YHR120W IRC24P40580 263 aa4.29□□□□□ -1.72
MSH1YHR120W PHS1P40857 217 aa4.29□□□□□ -1.72
MSH1YHR120W SSN8P47821 323 aa4.29□□□□□ -1.72
MSH1YHR120W MGA1P53050 456 aa4.29□□□□□ -1.72
MSH1YHR120W TEX1P53851 422 aaKnown RBP4.29□□□□□ -1.72
MSH1YHR120W MEH1Q02205 184 aa4.29□□□□□ -1.72
MSH1YHR120W TRS20P38334 175 aa4.29□□□□□ -1.72
MSH1YHR120W ECM14P38836 430 aa4.29□□□□□ -1.72
MSH1YHR120W SUR2P38992 349 aa4.29□□□□□ -1.72
MSH1YHR120W HED1Q03937 162 aa4.29□□□□□ -1.72
MSH1YHR120W YMR082CQ04276 118 aa4.29□□□□□ -1.72
MSH1YHR120W RPS23AP0CX29 145 aaKnown RBP4.28□□□□□ -1.72
MSH1YHR120W RPS23BP0CX30 145 aa4.28□□□□□ -1.72
MSH1YHR120W GLC7P32598 312 aaKnown RBP4.28□□□□□ -1.72
MSH1YHR120W GNA1P43577 159 aaPredicted RBP4.28□□□□□ -1.72
MSH1YHR120W RPA34P47006 233 aaPredicted RBP4.28□□□□□ -1.72
MSH1YHR120W ERG25P53045 309 aa4.28□□□□□ -1.72
MSH1YHR120W RSM23Q01163 450 aa4.28□□□□□ -1.72
MSH1YHR120W DIG2Q03373 323 aaKnown RBP4.28□□□□□ -1.72
MSH1YHR120W YLR365WQ7LIF2 110 aa4.28□□□□□ -1.72
MSH1YHR120W BPH1P25356 2167 aa4.28□□□□□ -1.72
MSH1YHR120W MES1P00958 751 aaKnown RBP4.28□□□□□ -1.72
MSH1YHR120W RPB3P16370 318 aaKnown RBP4.28□□□□□ -1.72
MSH1YHR120W LAC1P28496 418 aa4.28□□□□□ -1.72
MSH1YHR120W FLX1P40464 311 aa4.28□□□□□ -1.72
MSH1YHR120W PRM5P40476 318 aa4.28□□□□□ -1.72
MSH1YHR120W SLM1P40485 686 aa4.28□□□□□ -1.72
MSH1YHR120W VPS28Q02767 242 aa4.28□□□□□ -1.72
MSH1YHR120W YDR286CQ05530 114 aa4.28□□□□□ -1.72
MSH1YHR120W YBL010CP32788 280 aa4.28□□□□□ -1.73
MSH1YHR120W NTF2P33331 125 aaKnown RBP4.28□□□□□ -1.73
MSH1YHR120W EGT2P42835 1041 aa4.28□□□□□ -1.73
MSH1YHR120W CTK2P46962 323 aa4.28□□□□□ -1.73
MSH1YHR120W YJR011CP47086 261 aaPredicted RBP4.28□□□□□ -1.73
MSH1YHR120W YNR066CP53752 436 aa4.28□□□□□ -1.73
MSH1YHR120W FYV6P53913 173 aa4.28□□□□□ -1.73
MSH1YHR120W YPL108WQ02872 168 aaPredicted RBP4.28□□□□□ -1.73
MSH1YHR120W RRS1Q08746 203 aaKnown RBP4.28□□□□□ -1.73
MSH1YHR120W POP5P28005 173 aa4.27□□□□□ -1.73
MSH1YHR120W SMD3P43321 101 aaKnown RBP4.27□□□□□ -1.73
MSH1YHR120W YGL262WP53054 175 aa4.27□□□□□ -1.73
MSH1YHR120W PEF1P53238 335 aa4.27□□□□□ -1.73
MSH1YHR120W RAD28Q12021 506 aa4.27□□□□□ -1.73
MSH1YHR120W SPO24Q3E752 67 aa4.27□□□□□ -1.73
MSH1YHR120W CDC28P00546 298 aaKnown RBP4.27□□□□□ -1.73
MSH1YHR120W YCR101CP25607 182 aa4.27□□□□□ -1.73
MSH1YHR120W MNS1P32906 549 aa4.27□□□□□ -1.73
MSH1YHR120W YBR013CP38215 129 aa4.27□□□□□ -1.73
MSH1YHR120W WSS1P38838 269 aa4.27□□□□□ -1.73
MSH1YHR120W ATF1P40353 525 aa4.27□□□□□ -1.73
MSH1YHR120W OST1P41543 476 aaKnown RBP4.27□□□□□ -1.73
MSH1YHR120W AVT4P50944 713 aa4.27□□□□□ -1.73
MSH1YHR120W ADD37Q03233 198 aa4.27□□□□□ -1.73
MSH1YHR120W MED7Q08278 222 aa4.27□□□□□ -1.73
MSH1YHR120W GEP5Q12393 293 aa4.27□□□□□ -1.73
MSH1YHR120W ERP4Q12450 207 aa4.27□□□□□ -1.73
MSH1YHR120W OLE1P21147 510 aaKnown RBP4.26□□□□□ -1.73
MSH1YHR120W POF1P25576 258 aa4.26□□□□□ -1.73
MSH1YHR120W SWD2P36104 329 aaPredicted RBP4.26□□□□□ -1.73
MSH1YHR120W RIB5P38145 238 aa4.26□□□□□ -1.73
MSH1YHR120W BNS1P50084 137 aa4.26□□□□□ -1.73
MSH1YHR120W OCA2P53949 197 aa4.26□□□□□ -1.73
MSH1YHR120W ARL3Q02804 198 aa4.26□□□□□ -1.73
MSH1YHR120W YOL029CQ08187 201 aa4.26□□□□□ -1.73
MSH1YHR120W TDH3P00359 332 aaKnown RBP RIP-Chip data4.26□□□□□ -1.73not detected
MSH1YHR120W OCH1P31755 480 aa4.26□□□□□ -1.73
MSH1YHR120W ERG2P32352 222 aa4.26□□□□□ -1.73
MSH1YHR120W YER121WP40076 114 aa4.26□□□□□ -1.73
MSH1YHR120W AIR1P40507 360 aaKnown RBP4.26□□□□□ -1.73
MSH1YHR120W YJL016WP47072 561 aa4.26□□□□□ -1.73
MSH1YHR120W SBH2P52871 88 aa4.26□□□□□ -1.73
MSH1YHR120W ERV14P53173 138 aa4.26□□□□□ -1.73
MSH1YHR120W MSO1P53604 210 aaKnown RBP4.26□□□□□ -1.73
MSH1YHR120W YNR048WP53740 393 aa4.26□□□□□ -1.73
MSH1YHR120W SNA4Q07549 140 aa4.26□□□□□ -1.73
MSH1YHR120W ISU2Q12056 156 aa4.26□□□□□ -1.73
MSH1YHR120W COA2Q3E823 68 aa4.26□□□□□ -1.73
MSH1YHR120W CKA1P15790 372 aa4.25□□□□□ -1.73
MSH1YHR120W MCH2P36032 473 aa4.25□□□□□ -1.73
MSH1YHR120W CCS1P40202 249 aaKnown RBP4.25□□□□□ -1.73
MSH1YHR120W YJR012CP47087 207 aa4.25□□□□□ -1.73
MSH1YHR120W YDR415CQ04033 374 aaPredicted RBP4.25□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 23.8 ms