RNA–Protein interactions for RNA: YGR074W

SMD1, Transcript of Core Sm protein Sm D1, yeastyeast

Gene SMD1, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD1YGR074W UTP30P36144 274 aaKnown RBP1.33□□□□□ -2.2
SMD1YGR074W MRPL17P36528 281 aa1.33□□□□□ -2.2
SMD1YGR074W UMP1P38293 148 aa1.33□□□□□ -2.2
SMD1YGR074W PRM10P42946 383 aa1.33□□□□□ -2.2
SMD1YGR074W YDR249CQ03787 373 aa1.33□□□□□ -2.2
SMD1YGR074W TRM12Q04235 462 aa1.33□□□□□ -2.2
SMD1YGR074W HNT1Q04344 158 aaKnown RBP1.33□□□□□ -2.2
SMD1YGR074W NOC4Q06512 552 aaPredicted RBP1.33□□□□□ -2.2
SMD1YGR074W YLR031WQ07978 186 aa1.33□□□□□ -2.2
SMD1YGR074W YOL024WQ08172 172 aa1.33□□□□□ -2.2
SMD1YGR074W RIO1Q12196 484 aaKnown RBP1.33□□□□□ -2.2
SMD1YGR074W BOL1Q3E793 110 aa1.33□□□□□ -2.2
SMD1YGR074W MET5P47169 1442 aa1.32□□□□□ -2.2
SMD1YGR074W MBF1O14467 151 aaKnown RBP1.32□□□□□ -2.2
SMD1YGR074W PET9P18239 318 aaKnown RBP1.32□□□□□ -2.2
SMD1YGR074W SCL1P21243 252 aaKnown RBP1.32□□□□□ -2.2
SMD1YGR074W APA2P22108 325 aa1.32□□□□□ -2.2
SMD1YGR074W ADE1P27616 306 aa1.32□□□□□ -2.2
SMD1YGR074W MEI4P29467 408 aa1.32□□□□□ -2.2
SMD1YGR074W SEC17P32602 292 aa1.32□□□□□ -2.2
SMD1YGR074W VPS51P36116 164 aa1.32□□□□□ -2.2
SMD1YGR074W NRG2P38082 220 aa1.32□□□□□ -2.2
SMD1YGR074W YHR022CP38763 256 aa1.32□□□□□ -2.2
SMD1YGR074W YHR180WP38868 163 aa1.32□□□□□ -2.2
SMD1YGR074W YNL217WP40152 326 aa1.32□□□□□ -2.2
SMD1YGR074W DAN1P47178 298 aa1.32□□□□□ -2.2
SMD1YGR074W YNR062CP53748 327 aa1.32□□□□□ -2.2
SMD1YGR074W YDR274CP87283 123 aa1.32□□□□□ -2.2
SMD1YGR074W SPG3Q04398 127 aaPredicted RBP1.32□□□□□ -2.2
SMD1YGR074W MCP1Q12106 302 aa1.32□□□□□ -2.2
SMD1YGR074W YPR014CQ6B0W2 109 aa1.32□□□□□ -2.2
SMD1YGR074W YBR285WP38354 144 aa1.31□□□□□ -2.2
SMD1YGR074W DSE2P38844 325 aa1.31□□□□□ -2.2
SMD1YGR074W EGD2P38879 174 aaKnown RBP1.31□□□□□ -2.2
SMD1YGR074W AVT2P39981 480 aa1.31□□□□□ -2.2
SMD1YGR074W AGE2P40529 298 aa1.31□□□□□ -2.2
SMD1YGR074W TMA22P47089 198 aaPredicted RBP1.31□□□□□ -2.2
SMD1YGR074W SAY1P53324 424 aa1.31□□□□□ -2.2
SMD1YGR074W CYT2Q00873 224 aa1.31□□□□□ -2.2
SMD1YGR074W DGA1Q08650 418 aa1.31□□□□□ -2.2
SMD1YGR074W CYR1P08678 2026 aaKnown RBP1.31□□□□□ -2.2
SMD1YGR074W CPA1P07258 411 aaKnown RBP1.3□□□□□ -2.2
SMD1YGR074W RPS24AP0CX31 135 aaKnown RBP1.3□□□□□ -2.2
SMD1YGR074W RPS24BP0CX32 135 aaKnown RBP1.3□□□□□ -2.2
SMD1YGR074W MDH2P22133 377 aa1.3□□□□□ -2.2
SMD1YGR074W SEC14P24280 304 aaKnown RBP1.3□□□□□ -2.2
SMD1YGR074W CNB1P25296 175 aa1.3□□□□□ -2.2
SMD1YGR074W TRR1P29509 319 aaKnown RBP1.3□□□□□ -2.2
SMD1YGR074W ECM4P36156 370 aa1.3□□□□□ -2.2
SMD1YGR074W YBR209WP38311 105 aa1.3□□□□□ -2.2
SMD1YGR074W SVP26P38869 228 aa1.3□□□□□ -2.2
SMD1YGR074W SRP14P38985 146 aa1.3□□□□□ -2.2
SMD1YGR074W DOC1P53068 250 aa1.3□□□□□ -2.2
SMD1YGR074W YNL184CP53876 108 aa1.3□□□□□ -2.2
SMD1YGR074W NRK1P53915 240 aa1.3□□□□□ -2.2
SMD1YGR074W SNO1Q03144 224 aa1.3□□□□□ -2.2
SMD1YGR074W DYN3Q04949 312 aa1.3□□□□□ -2.2
SMD1YGR074W GRX8Q05926 109 aa1.3□□□□□ -2.2
SMD1YGR074W YHR086W-AQ3E746 53 aa1.3□□□□□ -2.2
SMD1YGR074W CMC2Q3E7A4 109 aa1.3□□□□□ -2.2
SMD1YGR074W ATP15P21306 62 aa1.29□□□□□ -2.2
SMD1YGR074W TVP23P38962 199 aa1.29□□□□□ -2.2
SMD1YGR074W PEP8P40335 379 aa1.29□□□□□ -2.2
SMD1YGR074W POG1P40473 351 aa1.29□□□□□ -2.2
SMD1YGR074W FMP32P43557 207 aa1.29□□□□□ -2.2
SMD1YGR074W YJL027CP47063 138 aaPredicted RBP1.29□□□□□ -2.2
SMD1YGR074W ARP3P47117 449 aaKnown RBP1.29□□□□□ -2.2
SMD1YGR074W BUD25P85052 153 aa1.29□□□□□ -2.2
SMD1YGR074W YMR295CQ03559 197 aa1.29□□□□□ -2.2
SMD1YGR074W AIM34Q03673 198 aa1.29□□□□□ -2.2
SMD1YGR074W PLP1Q04004 230 aa1.29□□□□□ -2.2
SMD1YGR074W ARO80Q04052 950 aa1.29□□□□□ -2.2
SMD1YGR074W GIM5Q04493 163 aa1.29□□□□□ -2.2
SMD1YGR074W FSF1Q12029 327 aaKnown RBP1.29□□□□□ -2.2
SMD1YGR074W ODC2Q99297 307 aa1.29□□□□□ -2.2
SMD1YGR074W GCY1P14065 312 aaKnown RBP RIP-Chip data1.28□□□□□ -2.2not detected
SMD1YGR074W MGT1P26188 188 aa1.28□□□□□ -2.2
SMD1YGR074W TFC1P32367 649 aa1.28□□□□□ -2.2
SMD1YGR074W SHE2P36068 246 aaKnown RBP RIP-Chip data1.28□□□□□ -2.2not detected
SMD1YGR074W PAN3P36102 679 aaPredicted RBP1.28□□□□□ -2.2
SMD1YGR074W YER134CP40081 178 aa1.28□□□□□ -2.2
SMD1YGR074W ERG10P41338 398 aaKnown RBP1.28□□□□□ -2.2
SMD1YGR074W SER2P42941 309 aa1.28□□□□□ -2.2
SMD1YGR074W BOL2P53082 120 aa1.28□□□□□ -2.2
SMD1YGR074W ARO8P53090 500 aaKnown RBP1.28□□□□□ -2.2
SMD1YGR074W JAC1P53193 184 aa1.28□□□□□ -2.2
SMD1YGR074W NUP49Q02199 472 aa1.28□□□□□ -2.2
SMD1YGR074W SHH4Q06236 168 aa1.28□□□□□ -2.2
SMD1YGR074W YML100W-AQ8TGT0 57 aa1.28□□□□□ -2.2
SMD1YGR074W ATG40Q99325 256 aa1.28□□□□□ -2.2
SMD1YGR074W UBR2Q07963 1872 aa1.28□□□□□ -2.2
SMD1YGR074W DDI2P0CH63 225 aa1.27□□□□□ -2.21
SMD1YGR074W DDI3P0CH64 225 aa1.27□□□□□ -2.21
SMD1YGR074W OCH1P31755 480 aa1.27□□□□□ -2.21
SMD1YGR074W FZF1P32805 299 aa1.27□□□□□ -2.21
SMD1YGR074W KDX1P36005 433 aa1.27□□□□□ -2.21
SMD1YGR074W OPY1P38271 328 aa1.27□□□□□ -2.21
SMD1YGR074W YEA4P40004 342 aa1.27□□□□□ -2.21
SMD1YGR074W YER034WP40022 185 aaKnown RBP1.27□□□□□ -2.21
SMD1YGR074W LSM4P40070 187 aaKnown RBP1.27□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 33.6 ms