RNA–Protein interactions for RNA: YGL025C

PGD1, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene PGD1, Length 1,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PGD1YGL025C VPS21P36017 210 aaKnown RBP1.51□□□□□ -2.17
PGD1YGL025C LDB7P38210 180 aa1.51□□□□□ -2.17
PGD1YGL025C FIG1P38224 298 aa1.51□□□□□ -2.17
PGD1YGL025C CUE1P38428 203 aa1.51□□□□□ -2.17
PGD1YGL025C YER135CP40082 130 aa1.51□□□□□ -2.17
PGD1YGL025C FAR7P43592 221 aa1.51□□□□□ -2.17
PGD1YGL025C ILM1P47155 203 aa1.51□□□□□ -2.17
PGD1YGL025C NSA1P53136 463 aaPredicted RBP1.51□□□□□ -2.17
PGD1YGL025C YIP3P53633 176 aa1.51□□□□□ -2.17
PGD1YGL025C COG5P53951 403 aa1.51□□□□□ -2.17
PGD1YGL025C YDR476CQ03362 224 aa1.51□□□□□ -2.17
PGD1YGL025C YPR098CQ06089 161 aa1.51□□□□□ -2.17
PGD1YGL025C YPR127WQ06494 345 aa1.51□□□□□ -2.17
PGD1YGL025C YCT1Q12235 531 aa1.51□□□□□ -2.17
PGD1YGL025C DGK1Q12382 290 aa1.51□□□□□ -2.17
PGD1YGL025C SEY1Q99287 776 aa1.51□□□□□ -2.17
PGD1YGL025C PET20Q99373 253 aa1.51□□□□□ -2.17
PGD1YGL025C Q0144Q9ZZW2 109 aa1.51□□□□□ -2.17
PGD1YGL025C GEA1P47102 1408 aaPredicted RBP1.5□□□□□ -2.17
PGD1YGL025C SIR4P11978 1358 aa1.5□□□□□ -2.17
PGD1YGL025C YIL177CP40434 1758 aa1.5□□□□□ -2.17
PGD1YGL025C YJL225CP40889 1758 aa1.5□□□□□ -2.17
PGD1YGL025C RHO1P06780 209 aaKnown RBP1.5□□□□□ -2.17
PGD1YGL025C SNA3P14359 133 aa1.5□□□□□ -2.17
PGD1YGL025C IDH1P28834 360 aaKnown RBP RIP-Chip data1.5□□□□□ -2.17not detected
PGD1YGL025C MDH3P32419 343 aaKnown RBP RIP-Chip data1.5□□□□□ -2.17not detected
PGD1YGL025C SGE1P33335 543 aa1.5□□□□□ -2.17
PGD1YGL025C CBT1P36038 271 aaPredicted RBP1.5□□□□□ -2.17
PGD1YGL025C TVP38P36164 337 aa1.5□□□□□ -2.17
PGD1YGL025C MRPL39P36533 70 aa1.5□□□□□ -2.17
PGD1YGL025C NVJ1P38881 321 aa1.5□□□□□ -2.17
PGD1YGL025C SEC72P39742 193 aaKnown RBP1.5□□□□□ -2.17
PGD1YGL025C RGI1P40043 161 aaPredicted RBP1.5□□□□□ -2.17
PGD1YGL025C COX15P40086 486 aa1.5□□□□□ -2.17
PGD1YGL025C OTU1P43558 301 aa1.5□□□□□ -2.17
PGD1YGL025C HOC1P47124 396 aa1.5□□□□□ -2.17
PGD1YGL025C GTR2P53290 341 aa1.5□□□□□ -2.17
PGD1YGL025C RUB1Q03919 77 aa1.5□□□□□ -2.17
PGD1YGL025C SPG4Q04438 115 aa1.5□□□□□ -2.17
PGD1YGL025C YDR278CQ05612 105 aa1.5□□□□□ -2.17
PGD1YGL025C LDB18Q07887 179 aa1.5□□□□□ -2.17
PGD1YGL025C RRP40Q08285 240 aaKnown RBP1.5□□□□□ -2.17
PGD1YGL025C UTP10P42945 1769 aaKnown RBP1.49□□□□□ -2.17
PGD1YGL025C TY1B-GR3Q12316 1755 aa1.49□□□□□ -2.17
PGD1YGL025C TY1B-ORQ92393 1755 aa1.49□□□□□ -2.17
PGD1YGL025C KRE5P22023 1365 aa1.49□□□□□ -2.17
PGD1YGL025C ULS1Q08562 1619 aa1.49□□□□□ -2.17
PGD1YGL025C CDC33P07260 213 aaKnown RBP1.49□□□□□ -2.17
PGD1YGL025C YGL041W-AP0C5N3 154 aa1.49□□□□□ -2.17
PGD1YGL025C DDI2P0CH63 225 aa1.49□□□□□ -2.17
PGD1YGL025C DDI3P0CH64 225 aa1.49□□□□□ -2.17
PGD1YGL025C NHP6BP11633 99 aaKnown RBP1.49□□□□□ -2.17
PGD1YGL025C ERD2P18414 219 aa1.49□□□□□ -2.17
PGD1YGL025C ATG22P25568 528 aa1.49□□□□□ -2.17
PGD1YGL025C RPS1AP33442 255 aaKnown RBP1.49□□□□□ -2.17
PGD1YGL025C CLG1P35190 452 aa1.49□□□□□ -2.17
PGD1YGL025C SRP102P36057 244 aaPredicted RBP1.49□□□□□ -2.17
PGD1YGL025C SKG1P36169 355 aa1.49□□□□□ -2.17
PGD1YGL025C YCR087C-AP37263 153 aa1.49□□□□□ -2.17
PGD1YGL025C PHO88P38264 188 aaPredicted RBP1.49□□□□□ -2.17
PGD1YGL025C YHR022CP38763 256 aa1.49□□□□□ -2.17
PGD1YGL025C EGD2P38879 174 aaKnown RBP1.49□□□□□ -2.17
PGD1YGL025C AIM18P38884 321 aa1.49□□□□□ -2.17
PGD1YGL025C ERG28P40030 148 aa1.49□□□□□ -2.17
PGD1YGL025C RFC4P40339 323 aaKnown RBP1.49□□□□□ -2.17
PGD1YGL025C BMT5P40493 336 aa1.49□□□□□ -2.17
PGD1YGL025C CIS3P47001 227 aa1.49□□□□□ -2.17
PGD1YGL025C TMA22P47089 198 aaPredicted RBP1.49□□□□□ -2.17
PGD1YGL025C YJR079WP47126 109 aa1.49□□□□□ -2.17
PGD1YGL025C SBH2P52871 88 aa1.49□□□□□ -2.17
PGD1YGL025C NQM1P53228 333 aaPredicted RBP1.49□□□□□ -2.17
PGD1YGL025C NOP19P53317 196 aaPredicted RBP1.49□□□□□ -2.17
PGD1YGL025C TMA20P89886 181 aaPredicted RBP1.49□□□□□ -2.17
PGD1YGL025C CYT2Q00873 224 aa1.49□□□□□ -2.17
PGD1YGL025C ARL3Q02804 198 aa1.49□□□□□ -2.17
PGD1YGL025C SNO1Q03144 224 aa1.49□□□□□ -2.17
PGD1YGL025C BNA7Q04066 261 aa1.49□□□□□ -2.17
PGD1YGL025C INM2Q05533 292 aa1.49□□□□□ -2.17
PGD1YGL025C NEJ1Q06148 342 aa1.49□□□□□ -2.17
PGD1YGL025C MEU1Q07938 337 aaKnown RBP RIP-Chip data1.49□□□□□ -2.17not detected
PGD1YGL025C TPO4Q12256 659 aa1.49□□□□□ -2.17
PGD1YGL025C YLR361C-AQ3E795 98 aa1.49□□□□□ -2.17
PGD1YGL025C DNA2P38859 1522 aa1.49□□□□□ -2.17
PGD1YGL025C TY1B-JR2P47100 1755 aaKnown RBP1.49□□□□□ -2.17
PGD1YGL025C TY1B-ER2Q03619 1755 aa1.49□□□□□ -2.17
PGD1YGL025C TY1B-MR1Q04214 1755 aa1.49□□□□□ -2.17
PGD1YGL025C TY1B-MR2Q04670 1755 aaKnown RBP1.49□□□□□ -2.17
PGD1YGL025C TY1B-LR1Q12088 1755 aaKnown RBP1.49□□□□□ -2.17
PGD1YGL025C TY1B-NL1Q12112 1755 aa1.49□□□□□ -2.17
PGD1YGL025C TY1B-GR1Q12141 1755 aa1.49□□□□□ -2.17
PGD1YGL025C TY1B-BRQ12193 1756 aa1.49□□□□□ -2.17
PGD1YGL025C TY1B-BLQ12490 1755 aa1.49□□□□□ -2.17
PGD1YGL025C SCC2Q04002 1493 aa1.49□□□□□ -2.17
PGD1YGL025C CAT8P39113 1433 aa1.49□□□□□ -2.17
PGD1YGL025C HTB1P02293 131 aaKnown RBP1.48□□□□□ -2.17
PGD1YGL025C HTB2P02294 131 aa1.48□□□□□ -2.17
PGD1YGL025C QCR2P07257 368 aa1.48□□□□□ -2.17
PGD1YGL025C NHP6AP11632 93 aaKnown RBP1.48□□□□□ -2.17
PGD1YGL025C URA6P15700 204 aa1.48□□□□□ -2.17
PGD1YGL025C PBN1P25580 416 aa1.48□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms