RNA–Protein interactions for RNA: YFR001W

LOC1, Nuclear protein involved in asymmetric localization of ASH1 mRNA, yeastyeast

Gene LOC1, Length 615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LOC1YFR001W SIR2P06700 562 aa1.31□□□□□ -2.2
LOC1YFR001W CDC33P07260 213 aaKnown RBP1.31□□□□□ -2.2
LOC1YFR001W RPB3P16370 318 aaKnown RBP1.31□□□□□ -2.2
LOC1YFR001W ATP15P21306 62 aa1.31□□□□□ -2.2
LOC1YFR001W MGM101P32787 269 aaKnown RBP1.31□□□□□ -2.2
LOC1YFR001W AST2P39945 430 aaKnown RBP1.31□□□□□ -2.2
LOC1YFR001W YDR274CP87283 123 aa1.31□□□□□ -2.2
LOC1YFR001W UBC7Q02159 165 aa1.31□□□□□ -2.2
LOC1YFR001W YDL180WQ12301 547 aa1.31□□□□□ -2.2
LOC1YFR001W TVP38P36164 337 aa1.3□□□□□ -2.2
LOC1YFR001W VMA22P38784 181 aa1.3□□□□□ -2.2
LOC1YFR001W GCN20P43535 752 aaKnown RBP1.3□□□□□ -2.2
LOC1YFR001W CWC23P52868 283 aaPredicted RBP1.3□□□□□ -2.2
LOC1YFR001W LSM7P53905 115 aaKnown RBP1.3□□□□□ -2.2
LOC1YFR001W COG5P53951 403 aa1.3□□□□□ -2.2
LOC1YFR001W YNG1Q08465 219 aa1.3□□□□□ -2.2
LOC1YFR001W MSB2P32334 1306 aa1.3□□□□□ -2.2
LOC1YFR001W ARG80P07249 177 aa1.29□□□□□ -2.2
LOC1YFR001W RUD3Q12234 484 aaKnown RBP1.29□□□□□ -2.2
LOC1YFR001W RPL25P04456 142 aaKnown RBP1.28□□□□□ -2.2
LOC1YFR001W RPL27AP0C2H6 136 aaKnown RBP1.28□□□□□ -2.2
LOC1YFR001W OPY1P38271 328 aa1.28□□□□□ -2.2
LOC1YFR001W CUE4Q04201 117 aaPredicted RBP1.28□□□□□ -2.2
LOC1YFR001W RAD28Q12021 506 aa1.28□□□□□ -2.2
LOC1YFR001W YNL146C-AQ3E7Z1 64 aa1.28□□□□□ -2.2
LOC1YFR001W VAR1P02381 398 aa1.27□□□□□ -2.21
LOC1YFR001W SEC11P15367 167 aa1.27□□□□□ -2.21
LOC1YFR001W MER1P16523 270 aa1.27□□□□□ -2.21
LOC1YFR001W MAG1P22134 296 aaKnown RBP1.27□□□□□ -2.21
LOC1YFR001W SPS18P32572 300 aa1.27□□□□□ -2.21
LOC1YFR001W TAF14P35189 244 aa1.27□□□□□ -2.21
LOC1YFR001W TRM5P38793 499 aa1.27□□□□□ -2.21
LOC1YFR001W RIO2P40160 425 aaKnown RBP1.27□□□□□ -2.21
LOC1YFR001W YOL160WQ08321 113 aa1.27□□□□□ -2.21
LOC1YFR001W KDX1P36005 433 aa1.26□□□□□ -2.21
LOC1YFR001W YCR087C-AP37263 153 aa1.26□□□□□ -2.21
LOC1YFR001W MDM32Q12171 622 aa1.26□□□□□ -2.21
LOC1YFR001W CKS1P20486 150 aaKnown RBP1.25□□□□□ -2.21
LOC1YFR001W IKI1P38874 309 aa1.25□□□□□ -2.21
LOC1YFR001W YER034WP40022 185 aaKnown RBP1.25□□□□□ -2.21
LOC1YFR001W PGA2P53903 129 aa1.25□□□□□ -2.21
LOC1YFR001W RNH1Q04740 348 aa1.25□□□□□ -2.21
LOC1YFR001W HMF1P40037 129 aaKnown RBP1.24□□□□□ -2.21
LOC1YFR001W ERG10P41338 398 aaKnown RBP1.24□□□□□ -2.21
LOC1YFR001W MPC3P53311 146 aa1.24□□□□□ -2.21
LOC1YFR001W HNT1Q04344 158 aaKnown RBP1.24□□□□□ -2.21
LOC1YFR001W GGA1Q06336 557 aa1.24□□□□□ -2.21
LOC1YFR001W GIS3Q12418 502 aa1.24□□□□□ -2.21
LOC1YFR001W FAS1P07149 2051 aaKnown RBP1.24□□□□□ -2.21
LOC1YFR001W AQY2P0CD90 149 aa1.23□□□□□ -2.21
LOC1YFR001W SPO13P23624 291 aa1.23□□□□□ -2.21
LOC1YFR001W RFA3P26755 122 aaKnown RBP1.23□□□□□ -2.21
LOC1YFR001W FLX1P40464 311 aa1.23□□□□□ -2.21
LOC1YFR001W AIM25P47140 327 aa1.23□□□□□ -2.21
LOC1YFR001W BNA7Q04066 261 aa1.23□□□□□ -2.21
LOC1YFR001W YHR007C-AQ07074 71 aa1.23□□□□□ -2.21
LOC1YFR001W ODC2Q99297 307 aa1.23□□□□□ -2.21
LOC1YFR001W IKI3Q06706 1349 aaKnown RBP1.22□□□□□ -2.21
LOC1YFR001W OCH1P31755 480 aa1.22□□□□□ -2.21
LOC1YFR001W YEL067CP39978 195 aa1.22□□□□□ -2.21
LOC1YFR001W YAE1P47118 141 aaPredicted RBP1.22□□□□□ -2.21
LOC1YFR001W POR1P04840 283 aaKnown RBP1.21□□□□□ -2.22
LOC1YFR001W ARO8P53090 500 aaKnown RBP1.21□□□□□ -2.22
LOC1YFR001W RCE1Q03530 315 aa1.21□□□□□ -2.22
LOC1YFR001W DGA1Q08650 418 aa1.21□□□□□ -2.22
LOC1YFR001W HTB1P02293 131 aaKnown RBP1.2□□□□□ -2.22
LOC1YFR001W HTB2P02294 131 aa1.2□□□□□ -2.22
LOC1YFR001W CNB1P25296 175 aa1.2□□□□□ -2.22
LOC1YFR001W YCR090CP25654 182 aaKnown RBP1.2□□□□□ -2.22
LOC1YFR001W PAN3P36102 679 aaPredicted RBP1.2□□□□□ -2.22
LOC1YFR001W TVP23P38962 199 aa1.2□□□□□ -2.22
LOC1YFR001W EDC3P39998 551 aaKnown RBP1.2□□□□□ -2.22
LOC1YFR001W YPL073CP40323 161 aa1.2□□□□□ -2.22
LOC1YFR001W GET1P53192 235 aa1.2□□□□□ -2.22
LOC1YFR001W YNL247WP53852 767 aaKnown RBP1.2□□□□□ -2.22
LOC1YFR001W TIM11P81449 96 aaPredicted RBP1.2□□□□□ -2.22
LOC1YFR001W YPR174CQ06616 221 aaPredicted RBP1.2□□□□□ -2.22
LOC1YFR001W ACC1Q00955 2233 aaKnown RBP1.2□□□□□ -2.22
LOC1YFR001W MDM35O60200 86 aa1.19□□□□□ -2.22
LOC1YFR001W CDC36P06100 191 aaPredicted RBP1.19□□□□□ -2.22
LOC1YFR001W YHL042WP38729 150 aa1.19□□□□□ -2.22
LOC1YFR001W YEA4P40004 342 aa1.19□□□□□ -2.22
LOC1YFR001W YFL065CP43539 102 aa1.19□□□□□ -2.22
LOC1YFR001W CWC27Q02770 301 aa1.19□□□□□ -2.22
LOC1YFR001W YRA1Q12159 226 aaKnown RBP1.18□□□□□ -2.22
LOC1YFR001W YCL012CQ8J0M4 134 aa1.18□□□□□ -2.22
LOC1YFR001W SOK1P40317 901 aa1.17□□□□□ -2.22
LOC1YFR001W HYR1P40581 163 aaKnown RBP1.17□□□□□ -2.22
LOC1YFR001W RPL37AP49166 88 aaKnown RBP1.17□□□□□ -2.22
LOC1YFR001W YMR226CQ05016 267 aaKnown RBP1.17□□□□□ -2.22
LOC1YFR001W SLH1P53327 1967 aaKnown RBP1.16□□□□□ -2.22
LOC1YFR001W MBF1O14467 151 aaKnown RBP1.16□□□□□ -2.22
LOC1YFR001W CBF1P17106 351 aa1.16□□□□□ -2.22
LOC1YFR001W RPB4P20433 221 aaPredicted RBP1.16□□□□□ -2.22
LOC1YFR001W ASF2P32448 525 aaPredicted RBP1.16□□□□□ -2.22
LOC1YFR001W ECM4P36156 370 aa1.16□□□□□ -2.22
LOC1YFR001W AIM2P39721 246 aa1.16□□□□□ -2.22
LOC1YFR001W SER2P42941 309 aa1.16□□□□□ -2.22
LOC1YFR001W SKI6P46948 246 aaPredicted RBP1.16□□□□□ -2.22
LOC1YFR001W DYN3Q04949 312 aa1.16□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms