RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 CLDN3O15551 220 aa11.03□□□□□ -0.64
PHGDH-224ENST00000641711 TLL1O43897 1013 aa11.03□□□□□ -0.64
PHGDH-224ENST00000641711 DGKIO75912 1065 aa11.03□□□□□ -0.64
PHGDH-224ENST00000641711 FAM228BP0C875 321 aa11.03□□□□□ -0.64
PHGDH-224ENST00000641711 ATF7P17544 494 aaPredicted RBP11.03□□□□□ -0.64
PHGDH-224ENST00000641711 GARTP22102 1010 aa11.03□□□□□ -0.64
PHGDH-224ENST00000641711 GRM5P41594 1212 aa11.03□□□□□ -0.64
PHGDH-224ENST00000641711 STAT1P42224 750 aa11.03□□□□□ -0.64
PHGDH-224ENST00000641711 VAMP7P51809 220 aa11.03□□□□□ -0.64
PHGDH-224ENST00000641711 MYL7Q01449 175 aa11.03□□□□□ -0.64
PHGDH-224ENST00000641711 PTK2Q05397 1052 aa11.03□□□□□ -0.64
PHGDH-224ENST00000641711 CBWD6Q4V339 395 aa11.03□□□□□ -0.64
PHGDH-224ENST00000641711 CBWD3Q5JTY5 395 aa11.03□□□□□ -0.64
PHGDH-224ENST00000641711 CBWD5Q5RIA9 395 aa11.03□□□□□ -0.64
PHGDH-224ENST00000641711 TMCO3Q6UWJ1 677 aa11.03□□□□□ -0.64
PHGDH-224ENST00000641711 GLB1LQ6UWU2 654 aa11.03□□□□□ -0.64
PHGDH-224ENST00000641711 ZNF571Q7Z3V5 609 aaPredicted RBP11.03□□□□□ -0.64
PHGDH-224ENST00000641711 ABI1Q8IZP0 508 aa11.03□□□□□ -0.64
PHGDH-224ENST00000641711 LRRC43Q8N309 656 aa11.03□□□□□ -0.64
PHGDH-224ENST00000641711 LMO3Q8TAP4 145 aa11.03□□□□□ -0.64
PHGDH-224ENST00000641711 CPB2Q96IY4 423 aa11.03□□□□□ -0.64
PHGDH-224ENST00000641711 YME1L1Q96TA2 773 aa11.03□□□□□ -0.64
PHGDH-224ENST00000641711 ZBED2Q9BTP6 218 aa11.03□□□□□ -0.64
PHGDH-224ENST00000641711 TARS2Q9BW92 718 aaKnown RBP11.03□□□□□ -0.64
PHGDH-224ENST00000641711 PARD6BQ9BYG5 372 aa11.03□□□□□ -0.64
PHGDH-224ENST00000641711 INTS2Q9H0H0 1204 aaKnown RBP11.03□□□□□ -0.64
PHGDH-224ENST00000641711 CDT1Q9H211 546 aa11.03□□□□□ -0.64
PHGDH-224ENST00000641711 ANKZF1Q9H8Y5 726 aa11.03□□□□□ -0.64
PHGDH-224ENST00000641711 RSAD1Q9HA92 442 aa11.03□□□□□ -0.64
PHGDH-224ENST00000641711 TOPORSQ9NS56 1045 aaPredicted RBP11.03□□□□□ -0.64
PHGDH-224ENST00000641711 ZNF446Q9NWS9 450 aa11.03□□□□□ -0.64
PHGDH-224ENST00000641711 HSPBP1Q9NZL4 362 aa11.03□□□□□ -0.64
PHGDH-224ENST00000641711 KANSL3Q9P2N6 904 aa11.03□□□□□ -0.64
PHGDH-224ENST00000641711 INTUQ9ULD6 942 aa11.03□□□□□ -0.64
PHGDH-224ENST00000641711 SNX12Q9UMY4 172 aa11.03□□□□□ -0.64
PHGDH-224ENST00000641711 IPPQ9Y573 584 aa11.03□□□□□ -0.64
PHGDH-224ENST00000641711 CAPN6Q9Y6Q1 641 aa11.03□□□□□ -0.64
PHGDH-224ENST00000641711 KIAA1671Q9BY89 1806 aa11.02□□□□□ -0.64
PHGDH-224ENST00000641711 F8VZ95 297 aa11.02□□□□□ -0.65
PHGDH-224ENST00000641711 ENC1O14682 589 aa11.02□□□□□ -0.65
PHGDH-224ENST00000641711 MOCS3O95396 460 aa11.02□□□□□ -0.65
PHGDH-224ENST00000641711 NPTXRO95502 500 aa11.02□□□□□ -0.65
PHGDH-224ENST00000641711 LDHAP00338 332 aaKnown RBP11.02□□□□□ -0.65
PHGDH-224ENST00000641711 EDN1P05305 212 aa11.02□□□□□ -0.65
PHGDH-224ENST00000641711 CCDC172P0C7W6 258 aa11.02□□□□□ -0.65
PHGDH-224ENST00000641711 ITGA4P13612 1032 aa11.02□□□□□ -0.65
PHGDH-224ENST00000641711 TCP1P17987 556 aaKnown RBP11.02□□□□□ -0.65
PHGDH-224ENST00000641711 DNAJB2P25686 324 aa11.02□□□□□ -0.65
PHGDH-224ENST00000641711 SOX5P35711 763 aa11.02□□□□□ -0.65
PHGDH-224ENST00000641711 CETN1Q12798 172 aa11.02□□□□□ -0.65
PHGDH-224ENST00000641711 BMS1Q14692 1282 aaKnown RBP11.02□□□□□ -0.65
PHGDH-224ENST00000641711 HABP4Q5JVS0 413 aaKnown RBP11.02□□□□□ -0.65
PHGDH-224ENST00000641711 C1orf220Q5T0J3 134 aa11.02□□□□□ -0.65
PHGDH-224ENST00000641711 FAM109BQ6ICB4 259 aaPredicted RBP11.02□□□□□ -0.65
PHGDH-224ENST00000641711 VPS36Q86VN1 386 aa11.02□□□□□ -0.65
PHGDH-224ENST00000641711 URGCPQ8TCY9 931 aa11.02□□□□□ -0.65
PHGDH-224ENST00000641711 HNRNPLLQ8WVV9 542 aaKnown RBP11.02□□□□□ -0.65
PHGDH-224ENST00000641711 FBXL18Q96ME1 805 aa11.02□□□□□ -0.65
PHGDH-224ENST00000641711 CBWD1Q9BRT8 395 aa11.02□□□□□ -0.65
PHGDH-224ENST00000641711 SYT11Q9BT88 431 aa11.02□□□□□ -0.65
PHGDH-224ENST00000641711 EIF2AQ9BY44 585 aaKnown RBP11.02□□□□□ -0.65
PHGDH-224ENST00000641711 APEX2Q9UBZ4 518 aa11.02□□□□□ -0.65
PHGDH-224ENST00000641711 ADAMTS1Q9UHI8 967 aa11.02□□□□□ -0.65
PHGDH-224ENST00000641711 SALL4Q9UJQ4 1053 aa11.02□□□□□ -0.65
PHGDH-224ENST00000641711 AJAP1Q9UKB5 411 aaPredicted RBP11.02□□□□□ -0.65
PHGDH-224ENST00000641711 PCDHGC5Q9Y5F6 944 aa11.02□□□□□ -0.65
PHGDH-224ENST00000641711 ANK1P16157 1881 aa11.02□□□□□ -0.65
PHGDH-224ENST00000641711 A0A0A6YYK5 440 aaPredicted RBP11.01□□□□□ -0.65
PHGDH-224ENST00000641711 A0A0B4J269 797 aa11.01□□□□□ -0.65
PHGDH-224ENST00000641711 OGTO15294 1046 aa11.01□□□□□ -0.65
PHGDH-224ENST00000641711 CLTAP09496 248 aa11.01□□□□□ -0.65
PHGDH-224ENST00000641711 TRIM49P0CI25 452 aa11.01□□□□□ -0.65
PHGDH-224ENST00000641711 TRIM49CP0CI26 452 aa11.01□□□□□ -0.65
PHGDH-224ENST00000641711 YARSP54577 528 aaKnown RBP11.01□□□□□ -0.65
PHGDH-224ENST00000641711 DRAP1Q14919 205 aaPredicted RBP11.01□□□□□ -0.65
PHGDH-224ENST00000641711 EPC2Q52LR7 807 aa11.01□□□□□ -0.65
PHGDH-224ENST00000641711 EEF1DP3Q658K8 133 aa11.01□□□□□ -0.65
PHGDH-224ENST00000641711 CC2D1AQ6P1N0 951 aaPredicted RBP11.01□□□□□ -0.65
PHGDH-224ENST00000641711 AGMOQ6ZNB7 445 aa11.01□□□□□ -0.65
PHGDH-224ENST00000641711 CREG2Q8IUH2 290 aa11.01□□□□□ -0.65
PHGDH-224ENST00000641711 CD302Q8IX05 232 aa11.01□□□□□ -0.65
PHGDH-224ENST00000641711 FIBCD1Q8N539 461 aa11.01□□□□□ -0.65
PHGDH-224ENST00000641711 SMG8Q8ND04 991 aaKnown RBP11.01□□□□□ -0.65
PHGDH-224ENST00000641711 SLC30A5Q8TAD4 765 aa11.01□□□□□ -0.65
PHGDH-224ENST00000641711 OLIG1Q8TAK6 271 aa11.01□□□□□ -0.65
PHGDH-224ENST00000641711 TMC2Q8TDI7 906 aa11.01□□□□□ -0.65
PHGDH-224ENST00000641711 CLP1Q92989 425 aaKnown RBP11.01□□□□□ -0.65
PHGDH-224ENST00000641711 RPS6KC1Q96S38 1066 aa11.01□□□□□ -0.65
PHGDH-224ENST00000641711 TCHPQ9BT92 498 aa11.01□□□□□ -0.65
PHGDH-224ENST00000641711 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.01□□□□□ -0.65
PHGDH-224ENST00000641711 PBX4Q9BYU1 374 aa11.01□□□□□ -0.65
PHGDH-224ENST00000641711 GPR88Q9GZN0 384 aa11.01□□□□□ -0.65
PHGDH-224ENST00000641711 PLEKHA5Q9HAU0 1116 aa11.01□□□□□ -0.65
PHGDH-224ENST00000641711 KIAA1586Q9HCI6 787 aa11.01□□□□□ -0.65
PHGDH-224ENST00000641711 RNF19AQ9NV58 838 aa11.01□□□□□ -0.65
PHGDH-224ENST00000641711 PCDH10Q9P2E7 1040 aa11.01□□□□□ -0.65
PHGDH-224ENST00000641711 ANKFY1Q9P2R3 1169 aa11.01□□□□□ -0.65
PHGDH-224ENST00000641711 RNF14Q9UBS8 474 aa11.01□□□□□ -0.65
PHGDH-224ENST00000641711 NAGPAQ9UK23 515 aa11.01□□□□□ -0.65
PHGDH-224ENST00000641711 DNAJC12Q9UKB3 198 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms