RNA–Protein interactions for RNA: ENST00000639406.1

KCNMA1-259, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 5,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-259ENST00000639406 TSPAN18Q96SJ8 248 aa11.41□□□□□ -0.58
KCNMA1-259ENST00000639406 MLPHQ9BV36 600 aaPredicted RBP11.41□□□□□ -0.58
KCNMA1-259ENST00000639406 TULP2O00295 520 aa11.41□□□□□ -0.58
KCNMA1-259ENST00000639406 THRAP10827 490 aa11.41□□□□□ -0.58
KCNMA1-259ENST00000639406 CCDC153Q494R4 210 aa11.41□□□□□ -0.58
KCNMA1-259ENST00000639406 CENPPQ6IPU0 288 aa11.41□□□□□ -0.58
KCNMA1-259ENST00000639406 UTS2BQ765I0 119 aa11.41□□□□□ -0.58
KCNMA1-259ENST00000639406 YTHDF3Q7Z739 585 aaKnown RBP11.41□□□□□ -0.58
KCNMA1-259ENST00000639406 CCSER1Q9C0I3 900 aa11.41□□□□□ -0.58
KCNMA1-259ENST00000639406 ASNSD1Q9NWL6 643 aa11.41□□□□□ -0.58
KCNMA1-259ENST00000639406 KLHL3Q9UH77 587 aa11.41□□□□□ -0.58
KCNMA1-259ENST00000639406 COL17A1Q9UMD9 1497 aaPredicted RBP11.41□□□□□ -0.58
KCNMA1-259ENST00000639406 ZBTB39O15060 712 aa11.41□□□□□ -0.58
KCNMA1-259ENST00000639406 CAPN15O75808 1086 aa11.41□□□□□ -0.58
KCNMA1-259ENST00000639406 POLR2MP0CAP2 368 aa11.41□□□□□ -0.58
KCNMA1-259ENST00000639406 EPHB2P29323 1055 aa11.41□□□□□ -0.58
KCNMA1-259ENST00000639406 CSE1LP55060 971 aaKnown RBP11.41□□□□□ -0.58
KCNMA1-259ENST00000639406 NCKAP1LP55160 1127 aa11.41□□□□□ -0.58
KCNMA1-259ENST00000639406 TUBA3EQ6PEY2 450 aa11.41□□□□□ -0.58
KCNMA1-259ENST00000639406 TMEM237Q96Q45 408 aa11.41□□□□□ -0.58
KCNMA1-259ENST00000639406 KMT5AQ9NQR1 393 aa11.41□□□□□ -0.58
KCNMA1-259ENST00000639406 CCDC59Q9P031 241 aaKnown RBP11.41□□□□□ -0.58
KCNMA1-259ENST00000639406 RIMBP2O15034 1052 aa11.41□□□□□ -0.58
KCNMA1-259ENST00000639406 SASH3O75995 380 aa11.41□□□□□ -0.58
KCNMA1-259ENST00000639406 RAG1P15918 1043 aa11.41□□□□□ -0.58
KCNMA1-259ENST00000639406 ATF4P18848 351 aaPredicted RBP11.41□□□□□ -0.58
KCNMA1-259ENST00000639406 NFKBIAP25963 317 aa11.41□□□□□ -0.58
KCNMA1-259ENST00000639406 SERPINB5P36952 375 aa11.41□□□□□ -0.58
KCNMA1-259ENST00000639406 TOB2Q14106 344 aaPredicted RBP11.41□□□□□ -0.58
KCNMA1-259ENST00000639406 TAB1Q15750 504 aa11.41□□□□□ -0.58
KCNMA1-259ENST00000639406 SPOUT1Q5T280 376 aaKnown RBP11.41□□□□□ -0.58
KCNMA1-259ENST00000639406 SDE2Q6IQ49 451 aa11.41□□□□□ -0.58
KCNMA1-259ENST00000639406 RBM44Q6ZP01 1051 aaKnown RBP11.41□□□□□ -0.58
KCNMA1-259ENST00000639406 TRAPPC11Q7Z392 1133 aa11.41□□□□□ -0.58
KCNMA1-259ENST00000639406 ZBTB33Q86T24 672 aa11.41□□□□□ -0.58
KCNMA1-259ENST00000639406 METTL13Q8N6R0 699 aa11.41□□□□□ -0.58
KCNMA1-259ENST00000639406 SDR42E1Q8WUS8 393 aa11.41□□□□□ -0.58
KCNMA1-259ENST00000639406 WNK4Q96J92 1243 aa11.41□□□□□ -0.58
KCNMA1-259ENST00000639406 NLRP4Q96MN2 994 aa11.41□□□□□ -0.58
KCNMA1-259ENST00000639406 CLIC5Q9NZA1 410 aa11.41□□□□□ -0.58
KCNMA1-259ENST00000639406 EMC3Q9P0I2 261 aa11.41□□□□□ -0.58
KCNMA1-259ENST00000639406 H2AFY2Q9P0M6 372 aaPredicted RBP11.41□□□□□ -0.58
KCNMA1-259ENST00000639406 MYO3BQ8WXR4 1341 aa11.4□□□□□ -0.58
KCNMA1-259ENST00000639406 PLCH2O75038 1416 aa11.4□□□□□ -0.58
KCNMA1-259ENST00000639406 PRPF3O43395 683 aaKnown RBP11.4□□□□□ -0.58
KCNMA1-259ENST00000639406 PSMG1O95456 288 aa11.4□□□□□ -0.58
KCNMA1-259ENST00000639406 WEE2P0C1S8 567 aa11.4□□□□□ -0.58
KCNMA1-259ENST00000639406 NECTIN1Q15223 517 aa11.4□□□□□ -0.58
KCNMA1-259ENST00000639406 RASA2Q15283 850 aa11.4□□□□□ -0.58
KCNMA1-259ENST00000639406 C11orf88Q6PI97 169 aa11.4□□□□□ -0.58
KCNMA1-259ENST00000639406 MROH5Q6ZUA9 1318 aa11.4□□□□□ -0.58
KCNMA1-259ENST00000639406 CLASP1Q7Z460 1538 aa11.4□□□□□ -0.58
KCNMA1-259ENST00000639406 KIAA0232Q92628 1395 aa11.4□□□□□ -0.58
KCNMA1-259ENST00000639406 TESPA1A2RU30 521 aaPredicted RBP11.4□□□□□ -0.58
KCNMA1-259ENST00000639406 CENPXA8MT69 81 aa11.4□□□□□ -0.58
KCNMA1-259ENST00000639406 IFNAR1P17181 557 aa11.4□□□□□ -0.58
KCNMA1-259ENST00000639406 YWHABP31946 246 aaKnown RBP11.4□□□□□ -0.58
KCNMA1-259ENST00000639406 PRKG1Q13976 671 aa11.4□□□□□ -0.58
KCNMA1-259ENST00000639406 DRAP1Q14919 205 aaPredicted RBP11.4□□□□□ -0.58
KCNMA1-259ENST00000639406 ZNF57Q68EA5 555 aaPredicted RBP11.4□□□□□ -0.58
KCNMA1-259ENST00000639406 OSBPL10Q9BXB5 764 aa11.4□□□□□ -0.58
KCNMA1-259ENST00000639406 SMIM31A0A1B0GVY4 71 aa11.4□□□□□ -0.58
KCNMA1-259ENST00000639406 TRIM43BA6NCK2 446 aa11.4□□□□□ -0.58
KCNMA1-259ENST00000639406 CYP2E1P05181 493 aaPredicted RBP11.4□□□□□ -0.58
KCNMA1-259ENST00000639406 ETS2P15036 469 aa11.4□□□□□ -0.58
KCNMA1-259ENST00000639406 ITGA8P53708 1063 aa11.4□□□□□ -0.58
KCNMA1-259ENST00000639406 TUBA3CQ13748 450 aa11.4□□□□□ -0.58
KCNMA1-259ENST00000639406 C6orf10Q5SRN2 563 aa11.4□□□□□ -0.58
KCNMA1-259ENST00000639406 CPXCR1Q8N123 301 aa11.4□□□□□ -0.58
KCNMA1-259ENST00000639406 CNKSR1Q969H4 720 aa11.4□□□□□ -0.58
KCNMA1-259ENST00000639406 FSD1LQ9BXM9 530 aa11.4□□□□□ -0.58
KCNMA1-259ENST00000639406 PABPC3Q9H361 631 aaKnown RBP11.4□□□□□ -0.58
KCNMA1-259ENST00000639406 ENTPD7Q9NQZ7 604 aa11.4□□□□□ -0.58
KCNMA1-259ENST00000639406 SERPINB13Q9UIV8 391 aa11.4□□□□□ -0.58
KCNMA1-259ENST00000639406 BTBD3Q9Y2F9 522 aa11.4□□□□□ -0.58
KCNMA1-259ENST00000639406 A0A087WXM4 84 aa11.4□□□□□ -0.59
KCNMA1-259ENST00000639406 CALB1P05937 261 aa11.4□□□□□ -0.59
KCNMA1-259ENST00000639406 FXR1P51114 621 aaKnown RBP eCLIP11.4□□□□□ -0.59
KCNMA1-259ENST00000639406 GALK1P51570 392 aa11.4□□□□□ -0.59
KCNMA1-259ENST00000639406 TNFAIP1Q13829 316 aa11.4□□□□□ -0.59
KCNMA1-259ENST00000639406 SPANXN2Q5MJ10 180 aa11.4□□□□□ -0.59
KCNMA1-259ENST00000639406 TAF2Q6P1X5 1199 aa11.4□□□□□ -0.59
KCNMA1-259ENST00000639406 IKBIPQ70UQ0 350 aa11.4□□□□□ -0.59
KCNMA1-259ENST00000639406 GLYCTKQ8IVS8 523 aa11.4□□□□□ -0.59
KCNMA1-259ENST00000639406 CDKL3Q8IVW4 592 aaPredicted RBP11.4□□□□□ -0.59
KCNMA1-259ENST00000639406 TRMT2AQ8IZ69 625 aaKnown RBP11.4□□□□□ -0.59
KCNMA1-259ENST00000639406 SLC35G2Q8TBE7 412 aa11.4□□□□□ -0.59
KCNMA1-259ENST00000639406 PI4K2BQ8TCG2 481 aa11.4□□□□□ -0.59
KCNMA1-259ENST00000639406 FLT4P35916 1363 aa11.39□□□□□ -0.59
KCNMA1-259ENST00000639406 SNTNA6NMZ2 147 aa11.39□□□□□ -0.59
KCNMA1-259ENST00000639406 MYO1DO94832 1006 aa11.39□□□□□ -0.59
KCNMA1-259ENST00000639406 S100A6P06703 90 aa11.39□□□□□ -0.59
KCNMA1-259ENST00000639406 ALOX5P09917 674 aa11.39□□□□□ -0.59
KCNMA1-259ENST00000639406 HOXD10P28358 340 aa11.39□□□□□ -0.59
KCNMA1-259ENST00000639406 GEMIN4P57678 1058 aaKnown RBP11.39□□□□□ -0.59
KCNMA1-259ENST00000639406 KCNK10P57789 538 aa11.39□□□□□ -0.59
KCNMA1-259ENST00000639406 STX5Q13190 355 aa11.39□□□□□ -0.59
KCNMA1-259ENST00000639406 HEATR6Q6AI08 1181 aaKnown RBP11.39□□□□□ -0.59
KCNMA1-259ENST00000639406 KBTBD2Q8IY47 623 aa11.39□□□□□ -0.59
KCNMA1-259ENST00000639406 HEXIM2Q96MH2 286 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms