RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 GRID2IPA4D2P6 1211 aa10.1□□□□□ -0.79
VPS25-205ENST00000590339 RRN3P2A6NIE6 340 aa10.1□□□□□ -0.79
VPS25-205ENST00000590339 B4GALT5O43286 388 aa10.1□□□□□ -0.79
VPS25-205ENST00000590339 ARHGEF15O94989 841 aa10.1□□□□□ -0.79
VPS25-205ENST00000590339 UPP2O95045 317 aa10.1□□□□□ -0.79
VPS25-205ENST00000590339 H2AFZP0C0S5 128 aa10.1□□□□□ -0.79
VPS25-205ENST00000590339 TMEM253P0C7T8 217 aa10.1□□□□□ -0.79
VPS25-205ENST00000590339 PRLRP16471 622 aa10.1□□□□□ -0.79
VPS25-205ENST00000590339 CHRNB2P17787 502 aa10.1□□□□□ -0.79
VPS25-205ENST00000590339 HOXC8P31273 242 aa10.1□□□□□ -0.79
VPS25-205ENST00000590339 TNFSF9P41273 254 aa10.1□□□□□ -0.79
VPS25-205ENST00000590339 PIK3CAP42336 1068 aa10.1□□□□□ -0.79
VPS25-205ENST00000590339 TCEAL1Q15170 157 aa10.1□□□□□ -0.79
VPS25-205ENST00000590339 SURF1Q15526 300 aa10.1□□□□□ -0.79
VPS25-205ENST00000590339 ERCC6LQ2NKX8 1250 aa10.1□□□□□ -0.79
VPS25-205ENST00000590339 ZNF568Q3ZCX4 644 aa10.1□□□□□ -0.79
VPS25-205ENST00000590339 LMBRD2Q68DH5 695 aaPredicted RBP10.1□□□□□ -0.79
VPS25-205ENST00000590339 H2AFVQ71UI9 128 aa10.1□□□□□ -0.79
VPS25-205ENST00000590339 SPRED2Q7Z698 418 aa10.1□□□□□ -0.79
VPS25-205ENST00000590339 ZNF410Q86VK4 478 aa10.1□□□□□ -0.79
VPS25-205ENST00000590339 PALB2Q86YC2 1186 aa10.1□□□□□ -0.79
VPS25-205ENST00000590339 GLYCTKQ8IVS8 523 aa10.1□□□□□ -0.79
VPS25-205ENST00000590339 PPM1KQ8N3J5 372 aa10.1□□□□□ -0.79
VPS25-205ENST00000590339 METTL13Q8N6R0 699 aa10.1□□□□□ -0.79
VPS25-205ENST00000590339 LRRC57Q8N9N7 239 aa10.1□□□□□ -0.79
VPS25-205ENST00000590339 USP38Q8NB14 1042 aa10.1□□□□□ -0.79
VPS25-205ENST00000590339 OR5B17Q8NGF7 314 aa10.1□□□□□ -0.79
VPS25-205ENST00000590339 SLC20A1Q8WUM9 679 aa10.1□□□□□ -0.79
VPS25-205ENST00000590339 SEPT8Q92599 483 aa10.1□□□□□ -0.79
VPS25-205ENST00000590339 GOLGA1Q92805 767 aa10.1□□□□□ -0.79
VPS25-205ENST00000590339 PRDM6Q9NQX0 595 aa10.1□□□□□ -0.79
VPS25-205ENST00000590339 C1orf112Q9NSG2 853 aa10.1□□□□□ -0.79
VPS25-205ENST00000590339 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.1□□□□□ -0.79
VPS25-205ENST00000590339 SAR1BQ9Y6B6 198 aa10.1□□□□□ -0.79
VPS25-205ENST00000590339 V9GYY5 206 aaPredicted RBP10.1□□□□□ -0.79
VPS25-205ENST00000590339 A0A087WZ62 844 aa10.09□□□□□ -0.79
VPS25-205ENST00000590339 INO80B-WBP1J3KQ70 363 aa10.09□□□□□ -0.79
VPS25-205ENST00000590339 ENC1O14682 589 aa10.09□□□□□ -0.79
VPS25-205ENST00000590339 BUB1O43683 1085 aa10.09□□□□□ -0.79
VPS25-205ENST00000590339 CHRNA1P02708 482 aa10.09□□□□□ -0.79
VPS25-205ENST00000590339 CLTAP09496 248 aa10.09□□□□□ -0.79
VPS25-205ENST00000590339 MCF2P10911 925 aa10.09□□□□□ -0.79
VPS25-205ENST00000590339 GHRP10912 638 aa10.09□□□□□ -0.79
VPS25-205ENST00000590339 HARSP12081 509 aaKnown RBP10.09□□□□□ -0.79
VPS25-205ENST00000590339 H2AFXP16104 143 aaPredicted RBP10.09□□□□□ -0.79
VPS25-205ENST00000590339 TNNI1P19237 187 aa10.09□□□□□ -0.79
VPS25-205ENST00000590339 ACO1P21399 889 aaKnown RBP10.09□□□□□ -0.79
VPS25-205ENST00000590339 TMOD1P28289 359 aa10.09□□□□□ -0.79
VPS25-205ENST00000590339 MATR3P43243 847 aaKnown RBP eCLIP10.09□□□□□ -0.79
VPS25-205ENST00000590339 GALCP54803 685 aa10.09□□□□□ -0.79
VPS25-205ENST00000590339 HADHBP55084 474 aaKnown RBP10.09□□□□□ -0.79
VPS25-205ENST00000590339 FMO1Q01740 532 aa10.09□□□□□ -0.79
VPS25-205ENST00000590339 TAP1Q03518 808 aa10.09□□□□□ -0.79
VPS25-205ENST00000590339 CKAP4Q07065 602 aaKnown RBP10.09□□□□□ -0.79
VPS25-205ENST00000590339 TMEM62Q0P6H9 643 aa10.09□□□□□ -0.79
VPS25-205ENST00000590339 PLEKHG4Q58EX7 1191 aa10.09□□□□□ -0.79
VPS25-205ENST00000590339 TAF2Q6P1X5 1199 aa10.09□□□□□ -0.79
VPS25-205ENST00000590339 SLFN11Q7Z7L1 901 aa10.09□□□□□ -0.79
VPS25-205ENST00000590339 NOP9Q86U38 636 aaKnown RBP10.09□□□□□ -0.79
VPS25-205ENST00000590339 RSPH3Q86UC2 560 aa10.09□□□□□ -0.79
VPS25-205ENST00000590339 KIAA0319LQ8IZA0 1049 aa10.09□□□□□ -0.79
VPS25-205ENST00000590339 RFFLQ8WZ73 363 aa10.09□□□□□ -0.79
VPS25-205ENST00000590339 DDX1Q92499 740 aaKnown RBP10.09□□□□□ -0.79
VPS25-205ENST00000590339 RABGGTAQ92696 567 aa10.09□□□□□ -0.79
VPS25-205ENST00000590339 TATDN2Q93075 761 aa10.09□□□□□ -0.79
VPS25-205ENST00000590339 MAP7D2Q96T17 732 aa10.09□□□□□ -0.79
VPS25-205ENST00000590339 FDXACB1Q9BRP7 624 aaPredicted RBP10.09□□□□□ -0.79
VPS25-205ENST00000590339 TLR10Q9BXR5 811 aa10.09□□□□□ -0.79
VPS25-205ENST00000590339 INO80BQ9C086 356 aaPredicted RBP10.09□□□□□ -0.79
VPS25-205ENST00000590339 ISCUQ9H1K1 167 aa10.09□□□□□ -0.79
VPS25-205ENST00000590339 PDZD7Q9H5P4 517 aa10.09□□□□□ -0.79
VPS25-205ENST00000590339 APOBEC3GQ9HC16 384 aaKnown RBP10.09□□□□□ -0.79
VPS25-205ENST00000590339 MTUS1Q9ULD2 1270 aa10.09□□□□□ -0.79
VPS25-205ENST00000590339 CNTN6Q9UQ52 1028 aa10.09□□□□□ -0.79
VPS25-205ENST00000590339 HYOU1Q9Y4L1 999 aa10.09□□□□□ -0.79
VPS25-205ENST00000590339 CITO14578 2027 aa10.09□□□□□ -0.79
VPS25-205ENST00000590339 SMIM35A0A1B0GVV1 85 aa10.08□□□□□ -0.8
VPS25-205ENST00000590339 ANKRD62A6NC57 917 aa10.08□□□□□ -0.8
VPS25-205ENST00000590339 EPOPA6NHQ4 379 aa10.08□□□□□ -0.8
VPS25-205ENST00000590339 MEFVO15553 781 aaPredicted RBP10.08□□□□□ -0.8
VPS25-205ENST00000590339 TSPAN1O60635 241 aa10.08□□□□□ -0.8
VPS25-205ENST00000590339 EFCAB14O75071 495 aa10.08□□□□□ -0.8
VPS25-205ENST00000590339 CAND2O75155 1236 aa10.08□□□□□ -0.8
VPS25-205ENST00000590339 PALMO75781 387 aa10.08□□□□□ -0.8
VPS25-205ENST00000590339 IL18RAPO95256 599 aa10.08□□□□□ -0.8
VPS25-205ENST00000590339 ASS1P00966 412 aaKnown RBP10.08□□□□□ -0.8
VPS25-205ENST00000590339 AMHP03971 560 aa10.08□□□□□ -0.8
VPS25-205ENST00000590339 VTNP04004 478 aa10.08□□□□□ -0.8
VPS25-205ENST00000590339 GZMAP12544 262 aa10.08□□□□□ -0.8
VPS25-205ENST00000590339 TCP1P17987 556 aaKnown RBP10.08□□□□□ -0.8
VPS25-205ENST00000590339 TNFAIP3P21580 790 aa10.08□□□□□ -0.8
VPS25-205ENST00000590339 TUBB4BP68371 445 aa10.08□□□□□ -0.8
VPS25-205ENST00000590339 NOP14P78316 857 aaKnown RBP10.08□□□□□ -0.8
VPS25-205ENST00000590339 CDR2Q01850 454 aa10.08□□□□□ -0.8
VPS25-205ENST00000590339 ITIH3Q06033 890 aa10.08□□□□□ -0.8
VPS25-205ENST00000590339 BIRC3Q13489 604 aa10.08□□□□□ -0.8
VPS25-205ENST00000590339 CUL2Q13617 745 aa10.08□□□□□ -0.8
VPS25-205ENST00000590339 IFI16Q16666 785 aaKnown RBP10.08□□□□□ -0.8
VPS25-205ENST00000590339 SEZ6Q53EL9 994 aa10.08□□□□□ -0.8
VPS25-205ENST00000590339 FAM26DQ5JW98 314 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms