RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 NXF1Q9UBU9 619 aaKnown RBP12.21□□□□□ -0.45
SMAD4-205ENST00000588745 POLIQ9UNA4 740 aa12.21□□□□□ -0.45
SMAD4-205ENST00000588745 CAPN6Q9Y6Q1 641 aa12.21□□□□□ -0.45
SMAD4-205ENST00000588745 NCANO14594 1321 aa12.21□□□□□ -0.46
SMAD4-205ENST00000588745 SMIM28A0A1B0GU29 152 aa12.2□□□□□ -0.46
SMAD4-205ENST00000588745 TMCO5BA8MYB1 307 aa12.2□□□□□ -0.46
SMAD4-205ENST00000588745 TLR3O15455 904 aaKnown RBP12.2□□□□□ -0.46
SMAD4-205ENST00000588745 TACC1O75410 805 aa12.2□□□□□ -0.46
SMAD4-205ENST00000588745 CD4P01730 458 aa12.2□□□□□ -0.46
SMAD4-205ENST00000588745 TMEM253P0C7T8 217 aa12.2□□□□□ -0.46
SMAD4-205ENST00000588745 ITGA4P13612 1032 aa12.2□□□□□ -0.46
SMAD4-205ENST00000588745 CD58P19256 250 aa12.2□□□□□ -0.46
SMAD4-205ENST00000588745 CYP3A5P20815 502 aa12.2□□□□□ -0.46
SMAD4-205ENST00000588745 GNA15P30679 374 aa12.2□□□□□ -0.46
SMAD4-205ENST00000588745 WDR72Q3MJ13 1102 aa12.2□□□□□ -0.46
SMAD4-205ENST00000588745 CTU1Q7Z7A3 348 aaKnown RBP12.2□□□□□ -0.46
SMAD4-205ENST00000588745 RNF10Q8N5U6 811 aaKnown RBP12.2□□□□□ -0.46
SMAD4-205ENST00000588745 LRRC52Q8N7C0 313 aa12.2□□□□□ -0.46
SMAD4-205ENST00000588745 TRIM58Q8NG06 486 aa12.2□□□□□ -0.46
SMAD4-205ENST00000588745 C18orf25Q96B23 403 aaPredicted RBP12.2□□□□□ -0.46
SMAD4-205ENST00000588745 NOX5Q96PH1 765 aa12.2□□□□□ -0.46
SMAD4-205ENST00000588745 ALS2CR12Q96Q35 445 aa12.2□□□□□ -0.46
SMAD4-205ENST00000588745 NAPGQ99747 312 aaPredicted RBP12.2□□□□□ -0.46
SMAD4-205ENST00000588745 TRAIPQ9BWF2 469 aa12.2□□□□□ -0.46
SMAD4-205ENST00000588745 CYP3A43Q9HB55 503 aa12.2□□□□□ -0.46
SMAD4-205ENST00000588745 TAS2R14Q9NYV8 317 aa12.2□□□□□ -0.46
SMAD4-205ENST00000588745 SALL4Q9UJQ4 1053 aa12.2□□□□□ -0.46
SMAD4-205ENST00000588745 TANC1Q9C0D5 1861 aa12.19□□□□□ -0.46
SMAD4-205ENST00000588745 A0A0A6YYK5 440 aaPredicted RBP12.19□□□□□ -0.46
SMAD4-205ENST00000588745 CTAGE9A4FU28 777 aa12.19□□□□□ -0.46
SMAD4-205ENST00000588745 ANKRD62A6NC57 917 aa12.19□□□□□ -0.46
SMAD4-205ENST00000588745 PTGESO14684 152 aa12.19□□□□□ -0.46
SMAD4-205ENST00000588745 PPEF2O14830 753 aa12.19□□□□□ -0.46
SMAD4-205ENST00000588745 MGEA5O60502 916 aa12.19□□□□□ -0.46
SMAD4-205ENST00000588745 ZNF623O75123 536 aa12.19□□□□□ -0.46
SMAD4-205ENST00000588745 RTN2O75298 545 aa12.19□□□□□ -0.46
SMAD4-205ENST00000588745 MOCS3O95396 460 aa12.19□□□□□ -0.46
SMAD4-205ENST00000588745 WEE2P0C1S8 567 aa12.19□□□□□ -0.46
SMAD4-205ENST00000588745 HSPA8P11142 646 aaKnown RBP12.19□□□□□ -0.46
SMAD4-205ENST00000588745 GZMAP12544 262 aa12.19□□□□□ -0.46
SMAD4-205ENST00000588745 RAP1GAPP47736 663 aa12.19□□□□□ -0.46
SMAD4-205ENST00000588745 GALCP54803 685 aa12.19□□□□□ -0.46
SMAD4-205ENST00000588745 TNNC1P63316 161 aa12.19□□□□□ -0.46
SMAD4-205ENST00000588745 MYO1EQ12965 1108 aa12.19□□□□□ -0.46
SMAD4-205ENST00000588745 MBTPS1Q14703 1052 aa12.19□□□□□ -0.46
SMAD4-205ENST00000588745 LRRC8DQ7L1W4 858 aa12.19□□□□□ -0.46
SMAD4-205ENST00000588745 MRPL10Q7Z7H8 261 aaKnown RBP12.19□□□□□ -0.46
SMAD4-205ENST00000588745 DNAAF5Q86Y56 855 aa12.19□□□□□ -0.46
SMAD4-205ENST00000588745 DNAJC5GQ8N7S2 189 aa12.19□□□□□ -0.46
SMAD4-205ENST00000588745 CTNNBL1Q8WYA6 563 aaPredicted RBP12.19□□□□□ -0.46
SMAD4-205ENST00000588745 ZNF333Q96JL9 665 aa12.19□□□□□ -0.46
SMAD4-205ENST00000588745 ZNF560Q96MR9 790 aa12.19□□□□□ -0.46
SMAD4-205ENST00000588745 SDCBP2Q9H190 292 aa12.19□□□□□ -0.46
SMAD4-205ENST00000588745 ISCUQ9H1K1 167 aa12.19□□□□□ -0.46
SMAD4-205ENST00000588745 FAM124BQ9H5Z6 455 aaPredicted RBP12.19□□□□□ -0.46
SMAD4-205ENST00000588745 SMYD3Q9H7B4 428 aa12.19□□□□□ -0.46
SMAD4-205ENST00000588745 L2HGDHQ9H9P8 463 aa12.19□□□□□ -0.46
SMAD4-205ENST00000588745 GIT1Q9Y2X7 761 aa12.19□□□□□ -0.46
SMAD4-205ENST00000588745 ANO9A1A5B4 782 aa12.18□□□□□ -0.46
SMAD4-205ENST00000588745 MEIS3P2A8K0S8 358 aa12.18□□□□□ -0.46
SMAD4-205ENST00000588745 RIOK3O14730 519 aaKnown RBP12.18□□□□□ -0.46
SMAD4-205ENST00000588745 THAP12O43422 761 aa12.18□□□□□ -0.46
SMAD4-205ENST00000588745 BUB1O43683 1085 aa12.18□□□□□ -0.46
SMAD4-205ENST00000588745 CALCAP01258 141 aa12.18□□□□□ -0.46
SMAD4-205ENST00000588745 SELPP16109 830 aa12.18□□□□□ -0.46
SMAD4-205ENST00000588745 ATF7P17544 494 aaPredicted RBP12.18□□□□□ -0.46
SMAD4-205ENST00000588745 MLH1P40692 756 aa12.18□□□□□ -0.46
SMAD4-205ENST00000588745 BFSP2Q13515 415 aa12.18□□□□□ -0.46
SMAD4-205ENST00000588745 CLEC16AQ2KHT3 1053 aa12.18□□□□□ -0.46
SMAD4-205ENST00000588745 C9orf57Q5W0N0 161 aa12.18□□□□□ -0.46
SMAD4-205ENST00000588745 FBXO46Q6PJ61 603 aaPredicted RBP12.18□□□□□ -0.46
SMAD4-205ENST00000588745 TRIM72Q6ZMU5 477 aa12.18□□□□□ -0.46
SMAD4-205ENST00000588745 TTC39CQ8N584 583 aa12.18□□□□□ -0.46
SMAD4-205ENST00000588745 RFFLQ8WZ73 363 aa12.18□□□□□ -0.46
SMAD4-205ENST00000588745 PPP1R10Q96QC0 940 aaKnown RBP12.18□□□□□ -0.46
SMAD4-205ENST00000588745 RPS6KC1Q96S38 1066 aa12.18□□□□□ -0.46
SMAD4-205ENST00000588745 CRISPLD2Q9H0B8 497 aa12.18□□□□□ -0.46
SMAD4-205ENST00000588745 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.18□□□□□ -0.46
SMAD4-205ENST00000588745 SCN1AP35498 2009 aa12.18□□□□□ -0.46
SMAD4-205ENST00000588745 A0A0U1RQF3 1178 aa12.18□□□□□ -0.46
SMAD4-205ENST00000588745 PIRO00625 290 aa12.18□□□□□ -0.46
SMAD4-205ENST00000588745 CILPO75339 1184 aa12.18□□□□□ -0.46
SMAD4-205ENST00000588745 URI1O94763 535 aaPredicted RBP12.18□□□□□ -0.46
SMAD4-205ENST00000588745 FTLP02792 175 aaPredicted RBP12.18□□□□□ -0.46
SMAD4-205ENST00000588745 CYP1A1P04798 512 aaPredicted RBP12.18□□□□□ -0.46
SMAD4-205ENST00000588745 PAEPP09466 180 aa12.18□□□□□ -0.46
SMAD4-205ENST00000588745 SKIP12755 728 aa12.18□□□□□ -0.46
SMAD4-205ENST00000588745 ABCB4P21439 1286 aa12.18□□□□□ -0.46
SMAD4-205ENST00000588745 LRPAP1P30533 357 aa12.18□□□□□ -0.46
SMAD4-205ENST00000588745 PNPLA4P41247 253 aa12.18□□□□□ -0.46
SMAD4-205ENST00000588745 NAP1L1P55209 391 aaKnown RBP12.18□□□□□ -0.46
SMAD4-205ENST00000588745 SOX4Q06945 474 aaPredicted RBP12.18□□□□□ -0.46
SMAD4-205ENST00000588745 INCA1Q0VD86 236 aa12.18□□□□□ -0.46
SMAD4-205ENST00000588745 IFI16Q16666 785 aaKnown RBP12.18□□□□□ -0.46
SMAD4-205ENST00000588745 AGMOQ6ZNB7 445 aa12.18□□□□□ -0.46
SMAD4-205ENST00000588745 LPPQ93052 612 aa12.18□□□□□ -0.46
SMAD4-205ENST00000588745 PGBD4Q96DM1 585 aa12.18□□□□□ -0.46
SMAD4-205ENST00000588745 ARHGEF26Q96DR7 871 aa12.18□□□□□ -0.46
SMAD4-205ENST00000588745 ZFP42Q96MM3 310 aa12.18□□□□□ -0.46
SMAD4-205ENST00000588745 ADAM2Q99965 735 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms