RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 BRSK2Q8IWQ3 736 aa18■□□□□ 0.47
SREBF1-219ENST00000580540 EFCAB13Q8IY85 973 aa18■□□□□ 0.47
SREBF1-219ENST00000580540 RHOBTB2Q9BYZ6 727 aa18■□□□□ 0.47
SREBF1-219ENST00000580540 CYP4F11Q9HBI6 524 aa18■□□□□ 0.47
SREBF1-219ENST00000580540 PVALEFA0A1B0GWK0 134 aa17.99■□□□□ 0.47
SREBF1-219ENST00000580540 PIRO00625 290 aa17.99■□□□□ 0.47
SREBF1-219ENST00000580540 EIF3DO15371 548 aaKnown RBP eCLIP17.99■□□□□ 0.47
SREBF1-219ENST00000580540 ACTN4O43707 911 aaKnown RBP17.99■□□□□ 0.47
SREBF1-219ENST00000580540 TBC1D4O60343 1298 aa17.99■□□□□ 0.47
SREBF1-219ENST00000580540 HOXD13P35453 343 aa17.99■□□□□ 0.47
SREBF1-219ENST00000580540 SYKP43405 635 aa17.99■□□□□ 0.47
SREBF1-219ENST00000580540 WNT7BP56706 349 aa17.99■□□□□ 0.47
SREBF1-219ENST00000580540 TRIM67Q6ZTA4 783 aa17.99■□□□□ 0.47
SREBF1-219ENST00000580540 GPD1LQ8N335 351 aa17.99■□□□□ 0.47
SREBF1-219ENST00000580540 FSIP1Q8NA03 581 aa17.99■□□□□ 0.47
SREBF1-219ENST00000580540 ZNF507Q8TCN5 953 aa17.99■□□□□ 0.47
SREBF1-219ENST00000580540 SENP8Q96LD8 212 aa17.99■□□□□ 0.47
SREBF1-219ENST00000580540 MYADMQ96S97 322 aa17.99■□□□□ 0.47
SREBF1-219ENST00000580540 SORCS3Q9UPU3 1222 aa17.99■□□□□ 0.47
SREBF1-219ENST00000580540 ANO9A1A5B4 782 aa17.98■□□□□ 0.47
SREBF1-219ENST00000580540 TMEM221A6NGB7 291 aa17.98■□□□□ 0.47
SREBF1-219ENST00000580540 M0R296 226 aa17.98■□□□□ 0.47
SREBF1-219ENST00000580540 CLIC2O15247 247 aa17.98■□□□□ 0.47
SREBF1-219ENST00000580540 SPTLC1O15269 473 aa17.98■□□□□ 0.47
SREBF1-219ENST00000580540 N4BP1O75113 896 aaKnown RBP17.98■□□□□ 0.47
SREBF1-219ENST00000580540 ABLIM3O94929 683 aa17.98■□□□□ 0.47
SREBF1-219ENST00000580540 LRG1P02750 347 aa17.98■□□□□ 0.47
SREBF1-219ENST00000580540 ODC1P11926 461 aa17.98■□□□□ 0.47
SREBF1-219ENST00000580540 FSHRP23945 695 aa17.98■□□□□ 0.47
SREBF1-219ENST00000580540 AARSP49588 968 aaKnown RBP eCLIP17.98■□□□□ 0.47
SREBF1-219ENST00000580540 MTMR3Q13615 1198 aa17.98■□□□□ 0.47
SREBF1-219ENST00000580540 EPM2AIP1Q7L775 607 aaPredicted RBP17.98■□□□□ 0.47
SREBF1-219ENST00000580540 CACTINQ8WUQ7 758 aaKnown RBP17.98■□□□□ 0.47
SREBF1-219ENST00000580540 SCFD1Q8WVM8 642 aa17.98■□□□□ 0.47
SREBF1-219ENST00000580540 FAM84AQ96KN4 292 aa17.98■□□□□ 0.47
SREBF1-219ENST00000580540 SMOC2Q9H3U7 446 aa17.98■□□□□ 0.47
SREBF1-219ENST00000580540 PDE11AQ9HCR9 933 aa17.98■□□□□ 0.47
SREBF1-219ENST00000580540 HSPBP1Q9NZL4 362 aa17.98■□□□□ 0.47
SREBF1-219ENST00000580540 USP25Q9UHP3 1055 aa17.98■□□□□ 0.47
SREBF1-219ENST00000580540 ANK1P16157 1881 aa17.98■□□□□ 0.47
SREBF1-219ENST00000580540 TCHHQ07283 1943 aa17.98■□□□□ 0.47
SREBF1-219ENST00000580540 ZNF233A6NK53 670 aa17.97■□□□□ 0.47
SREBF1-219ENST00000580540 KIAA0391O15091 583 aaKnown RBP17.97■□□□□ 0.47
SREBF1-219ENST00000580540 OAZ2O95190 189 aa17.97■□□□□ 0.47
SREBF1-219ENST00000580540 SEC24AO95486 1093 aa17.97■□□□□ 0.47
SREBF1-219ENST00000580540 OR4Q2P0C623 313 aa17.97■□□□□ 0.47
SREBF1-219ENST00000580540 ATF2P15336 505 aa17.97■□□□□ 0.47
SREBF1-219ENST00000580540 HOXA9P31269 272 aa17.97■□□□□ 0.47
SREBF1-219ENST00000580540 TAF6P49848 677 aa17.97■□□□□ 0.47
SREBF1-219ENST00000580540 CYP2J2P51589 502 aa17.97■□□□□ 0.47
SREBF1-219ENST00000580540 NDUFA8P51970 172 aa17.97■□□□□ 0.47
SREBF1-219ENST00000580540 NUCB2P80303 420 aa17.97■□□□□ 0.47
SREBF1-219ENST00000580540 ADCY1Q08828 1119 aa17.97■□□□□ 0.47
SREBF1-219ENST00000580540 TPGS2Q68CL5 300 aa17.97■□□□□ 0.47
SREBF1-219ENST00000580540 OVOS1Q6IE37 1185 aa17.97■□□□□ 0.47
SREBF1-219ENST00000580540 HFE2Q6ZVN8 426 aa17.97■□□□□ 0.47
SREBF1-219ENST00000580540 NT5DC4Q86YG4 428 aa17.97■□□□□ 0.47
SREBF1-219ENST00000580540 CBWD2Q8IUF1 395 aa17.97■□□□□ 0.47
SREBF1-219ENST00000580540 RDH13Q8NBN7 331 aa17.97■□□□□ 0.47
SREBF1-219ENST00000580540 PBXIP1Q96AQ6 731 aa17.97■□□□□ 0.47
SREBF1-219ENST00000580540 EXOC1Q9NV70 894 aa17.97■□□□□ 0.47
SREBF1-219ENST00000580540 HCFC1R1Q9NWW0 138 aa17.97■□□□□ 0.47
SREBF1-219ENST00000580540 AGAP1Q9UPQ3 857 aa17.97■□□□□ 0.47
SREBF1-219ENST00000580540 HPSEQ9Y251 543 aa17.97■□□□□ 0.47
SREBF1-219ENST00000580540 DOCK6Q96HP0 2047 aa17.97■□□□□ 0.47
SREBF1-219ENST00000580540 DENND4AQ7Z401 1863 aa17.97■□□□□ 0.47
SREBF1-219ENST00000580540 ARHGEF37A1IGU5 675 aa17.96■□□□□ 0.47
SREBF1-219ENST00000580540 CYB561D2O14569 222 aa17.96■□□□□ 0.47
SREBF1-219ENST00000580540 PAPLNO95428 1278 aa17.96■□□□□ 0.47
SREBF1-219ENST00000580540 KRT19P08727 400 aa17.96■□□□□ 0.47
SREBF1-219ENST00000580540 TYMPP19971 482 aa17.96■□□□□ 0.47
SREBF1-219ENST00000580540 PAX3P23760 479 aa17.96■□□□□ 0.47
SREBF1-219ENST00000580540 POLR2BP30876 1174 aaKnown RBP17.96■□□□□ 0.47
SREBF1-219ENST00000580540 EHHADHQ08426 723 aa17.96■□□□□ 0.47
SREBF1-219ENST00000580540 SIGLEC14Q08ET2 396 aa17.96■□□□□ 0.47
SREBF1-219ENST00000580540 KMT5BQ4FZB7 885 aa17.96■□□□□ 0.47
SREBF1-219ENST00000580540 LMBRD2Q68DH5 695 aaPredicted RBP17.96■□□□□ 0.47
SREBF1-219ENST00000580540 RNF19BQ6ZMZ0 732 aa17.96■□□□□ 0.47
SREBF1-219ENST00000580540 HS2ST1Q7LGA3 356 aa17.96■□□□□ 0.47
SREBF1-219ENST00000580540 METTL23Q86XA0 190 aa17.96■□□□□ 0.47
SREBF1-219ENST00000580540 CSGALNACT2Q8N6G5 542 aa17.96■□□□□ 0.47
SREBF1-219ENST00000580540 ST13P5Q8NFI4 369 aaPredicted RBP17.96■□□□□ 0.47
SREBF1-219ENST00000580540 PGLYRP2Q96PD5 576 aa17.96■□□□□ 0.47
SREBF1-219ENST00000580540 KCNK12Q9HB15 430 aa17.96■□□□□ 0.47
SREBF1-219ENST00000580540 AGPAT3Q9NRZ7 376 aa17.96■□□□□ 0.47
SREBF1-219ENST00000580540 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.96■□□□□ 0.47
SREBF1-219ENST00000580540 DNMT3BQ9UBC3 853 aaKnown RBP17.96■□□□□ 0.47
SREBF1-219ENST00000580540 AFF4Q9UHB7 1163 aaKnown RBP17.96■□□□□ 0.47
SREBF1-219ENST00000580540 UBE4BO95155 1302 aa17.96■□□□□ 0.46
SREBF1-219ENST00000580540 TECTAO75443 2155 aa17.96■□□□□ 0.46
SREBF1-219ENST00000580540 A0A1W2PQ27 194 aa17.95■□□□□ 0.46
SREBF1-219ENST00000580540 A0A1W2PQ64 194 aa17.95■□□□□ 0.46
SREBF1-219ENST00000580540 A0A1W2PQD8 194 aa17.95■□□□□ 0.46
SREBF1-219ENST00000580540 OR6C75A6NL08 312 aa17.95■□□□□ 0.46
SREBF1-219ENST00000580540 TGFB1I1O43294 461 aa17.95■□□□□ 0.46
SREBF1-219ENST00000580540 KLRC4O43908 158 aa17.95■□□□□ 0.46
SREBF1-219ENST00000580540 ITGB3P05106 788 aa17.95■□□□□ 0.46
SREBF1-219ENST00000580540 TMEM191BP0C7N4 346 aa17.95■□□□□ 0.46
SREBF1-219ENST00000580540 SV2CQ496J9 727 aa17.95■□□□□ 0.46
SREBF1-219ENST00000580540 PABPC1LQ4VXU2 614 aaKnown RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms