RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 WRAP73Q9P2S5 460 aaPredicted RBP6.48□□□□□ -1.37
SMG6-219ENST00000575663 EBF1Q9UH73 591 aa6.48□□□□□ -1.37
SMG6-219ENST00000575663 FBXL5Q9UKA1 691 aa6.48□□□□□ -1.37
SMG6-219ENST00000575663 GDAQ9Y2T3 454 aa6.48□□□□□ -1.37
SMG6-219ENST00000575663 YIPF1Q9Y548 306 aa6.48□□□□□ -1.37
SMG6-219ENST00000575663 NUB1Q9Y5A7 615 aa6.48□□□□□ -1.37
SMG6-219ENST00000575663 CNOT1A5YKK6 2376 aaKnown RBP6.48□□□□□ -1.37
SMG6-219ENST00000575663 WDR81Q562E7 1941 aa6.48□□□□□ -1.37
SMG6-219ENST00000575663 TICRRQ7Z2Z1 1910 aa6.48□□□□□ -1.37
SMG6-219ENST00000575663 FREM2Q5SZK8 3169 aa6.48□□□□□ -1.37
SMG6-219ENST00000575663 CCDC194A0A1B0GVG4 234 aa6.47□□□□□ -1.37
SMG6-219ENST00000575663 SPAARA0A1B0GVQ0 90 aa6.47□□□□□ -1.37
SMG6-219ENST00000575663 UPK3BL1B0FP48 263 aa6.47□□□□□ -1.37
SMG6-219ENST00000575663 PATE3B3GLJ2 98 aa6.47□□□□□ -1.37
SMG6-219ENST00000575663 UPK3BL2E5RIL1 263 aa6.47□□□□□ -1.37
SMG6-219ENST00000575663 I3L4J1 428 aa6.47□□□□□ -1.37
SMG6-219ENST00000575663 PODXLO00592 558 aa6.47□□□□□ -1.37
SMG6-219ENST00000575663 TRDMT1O14717 391 aaKnown RBP6.47□□□□□ -1.37
SMG6-219ENST00000575663 SLC37A4O43826 429 aa6.47□□□□□ -1.37
SMG6-219ENST00000575663 GCFC2P16383 781 aaKnown RBP6.47□□□□□ -1.37
SMG6-219ENST00000575663 GLRA2P23416 452 aa6.47□□□□□ -1.37
SMG6-219ENST00000575663 MAPK8P45983 427 aa6.47□□□□□ -1.37
SMG6-219ENST00000575663 DHPSP49366 369 aaPredicted RBP6.47□□□□□ -1.37
SMG6-219ENST00000575663 YARSP54577 528 aaKnown RBP6.47□□□□□ -1.37
SMG6-219ENST00000575663 EPHB3P54753 998 aa6.47□□□□□ -1.37
SMG6-219ENST00000575663 CYP4A11Q02928 519 aa6.47□□□□□ -1.37
SMG6-219ENST00000575663 TNK2Q07912 1038 aa6.47□□□□□ -1.37
SMG6-219ENST00000575663 SCAPQ12770 1279 aa6.47□□□□□ -1.37
SMG6-219ENST00000575663 DMC1Q14565 340 aa6.47□□□□□ -1.37
SMG6-219ENST00000575663 MAPK6Q16659 721 aa6.47□□□□□ -1.37
SMG6-219ENST00000575663 CDCA2Q69YH5 1023 aaPredicted RBP6.47□□□□□ -1.37
SMG6-219ENST00000575663 FSTL4Q6MZW2 842 aa6.47□□□□□ -1.37
SMG6-219ENST00000575663 DHX32Q7L7V1 743 aaKnown RBP6.47□□□□□ -1.37
SMG6-219ENST00000575663 TMC8Q8IU68 726 aa6.47□□□□□ -1.37
SMG6-219ENST00000575663 CHCHD4Q8N4Q1 142 aa6.47□□□□□ -1.37
SMG6-219ENST00000575663 APPL2Q8NEU8 664 aa6.47□□□□□ -1.37
SMG6-219ENST00000575663 HNRNPLLQ8WVV9 542 aaKnown RBP6.47□□□□□ -1.37
SMG6-219ENST00000575663 PIGKQ92643 395 aa6.47□□□□□ -1.37
SMG6-219ENST00000575663 DYDC2Q96IM9 177 aa6.47□□□□□ -1.37
SMG6-219ENST00000575663 LRIG1Q96JA1 1093 aa6.47□□□□□ -1.37
SMG6-219ENST00000575663 SPACA7Q96KW9 195 aa6.47□□□□□ -1.37
SMG6-219ENST00000575663 TCEANC2Q96MN5 208 aa6.47□□□□□ -1.37
SMG6-219ENST00000575663 PPP1R10Q96QC0 940 aaKnown RBP6.47□□□□□ -1.37
SMG6-219ENST00000575663 SLC26A6Q9BXS9 759 aa6.47□□□□□ -1.37
SMG6-219ENST00000575663 OXCT2Q9BYC2 517 aaPredicted RBP6.47□□□□□ -1.37
SMG6-219ENST00000575663 LSG1Q9H089 658 aaKnown RBP6.47□□□□□ -1.37
SMG6-219ENST00000575663 ATXN3LQ9H3M9 355 aa6.47□□□□□ -1.37
SMG6-219ENST00000575663 GOLGA2P5Q9HBQ8 144 aa6.47□□□□□ -1.37
SMG6-219ENST00000575663 KCNMB3Q9NPA1 279 aa6.47□□□□□ -1.37
SMG6-219ENST00000575663 SCUBE2Q9NQ36 999 aa6.47□□□□□ -1.37
SMG6-219ENST00000575663 ANO2Q9NQ90 1003 aa6.47□□□□□ -1.37
SMG6-219ENST00000575663 SH3GLB2Q9NR46 395 aa6.47□□□□□ -1.37
SMG6-219ENST00000575663 CACNA2D2Q9NY47 1150 aa6.47□□□□□ -1.37
SMG6-219ENST00000575663 VAV3Q9UKW4 847 aa6.47□□□□□ -1.37
SMG6-219ENST00000575663 PCDHA4Q9UN74 947 aa6.47□□□□□ -1.37
SMG6-219ENST00000575663 TDRD15B5MCY1 1934 aaKnown RBP6.46□□□□□ -1.37
SMG6-219ENST00000575663 NID2Q14112 1375 aa6.46□□□□□ -1.37
SMG6-219ENST00000575663 EDIL3O43854 480 aa6.46□□□□□ -1.38
SMG6-219ENST00000575663 USO1O60763 962 aaKnown RBP6.46□□□□□ -1.38
SMG6-219ENST00000575663 OPHN1O60890 802 aa6.46□□□□□ -1.38
SMG6-219ENST00000575663 PRAMEF12O95522 483 aa6.46□□□□□ -1.38
SMG6-219ENST00000575663 EGFP01133 1207 aa6.46□□□□□ -1.38
SMG6-219ENST00000575663 ENGP17813 658 aa6.46□□□□□ -1.38
SMG6-219ENST00000575663 CDC25CP30307 473 aa6.46□□□□□ -1.38
SMG6-219ENST00000575663 MCM4P33991 863 aa6.46□□□□□ -1.38
SMG6-219ENST00000575663 ARL2P36404 184 aa6.46□□□□□ -1.38
SMG6-219ENST00000575663 ALDH1A3P47895 512 aa6.46□□□□□ -1.38
SMG6-219ENST00000575663 IRX4P78413 519 aa6.46□□□□□ -1.38
SMG6-219ENST00000575663 PSMD2Q13200 908 aa6.46□□□□□ -1.38
SMG6-219ENST00000575663 SEMA3BQ13214 749 aa6.46□□□□□ -1.38
SMG6-219ENST00000575663 RUNX3Q13761 415 aa6.46□□□□□ -1.38
SMG6-219ENST00000575663 CTTNQ14247 550 aaKnown RBP6.46□□□□□ -1.38
SMG6-219ENST00000575663 KRT32Q14532 448 aa6.46□□□□□ -1.38
SMG6-219ENST00000575663 NECTIN1Q15223 517 aa6.46□□□□□ -1.38
SMG6-219ENST00000575663 FAM187BQ17R55 369 aa6.46□□□□□ -1.38
SMG6-219ENST00000575663 STXBP5Q5T5C0 1151 aa6.46□□□□□ -1.38
SMG6-219ENST00000575663 GPR158Q5T848 1215 aa6.46□□□□□ -1.38
SMG6-219ENST00000575663 LPCAT2Q7L5N7 544 aa6.46□□□□□ -1.38
SMG6-219ENST00000575663 KRT25Q7Z3Z0 450 aa6.46□□□□□ -1.38
SMG6-219ENST00000575663 RAB44Q7Z6P3 723 aaPredicted RBP6.46□□□□□ -1.38
SMG6-219ENST00000575663 PIP4P1Q86T03 277 aa6.46□□□□□ -1.38
SMG6-219ENST00000575663 ITIH5Q86UX2 942 aa6.46□□□□□ -1.38
SMG6-219ENST00000575663 NOSTRINQ8IVI9 506 aa6.46□□□□□ -1.38
SMG6-219ENST00000575663 TPH2Q8IWU9 490 aa6.46□□□□□ -1.38
SMG6-219ENST00000575663 SLFN12Q8IYM2 578 aa6.46□□□□□ -1.38
SMG6-219ENST00000575663 TRIM22Q8IYM9 498 aa6.46□□□□□ -1.38
SMG6-219ENST00000575663 C3orf58Q8NDZ4 430 aa6.46□□□□□ -1.38
SMG6-219ENST00000575663 MCPH1Q8NEM0 835 aa6.46□□□□□ -1.38
SMG6-219ENST00000575663 BBC3Q96PG8 261 aaPredicted RBP6.46□□□□□ -1.38
SMG6-219ENST00000575663 UBL7Q96S82 380 aaPredicted RBP6.46□□□□□ -1.38
SMG6-219ENST00000575663 NAP1L4Q99733 375 aaKnown RBP6.46□□□□□ -1.38
SMG6-219ENST00000575663 P2RY13Q9BPV8 354 aa6.46□□□□□ -1.38
SMG6-219ENST00000575663 TPSD1Q9BZJ3 242 aa6.46□□□□□ -1.38
SMG6-219ENST00000575663 ANKEF1Q9NU02 776 aa6.46□□□□□ -1.38
SMG6-219ENST00000575663 RGL1Q9NZL6 768 aa6.46□□□□□ -1.38
SMG6-219ENST00000575663 ZMYM5Q9UJ78 669 aa6.46□□□□□ -1.38
SMG6-219ENST00000575663 ASB3Q9Y575 518 aa6.46□□□□□ -1.38
SMG6-219ENST00000575663 F5P12259 2224 aa6.46□□□□□ -1.38
SMG6-219ENST00000575663 ASH1LQ9NR48 2969 aaKnown RBP6.45□□□□□ -1.38
SMG6-219ENST00000575663 ACKR2O00590 384 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms