RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 SMARCC2Q8TAQ2 1214 aa6.56□□□□□ -1.36
SF3B3-214ENST00000572365 JPH3Q8WXH2 748 aaPredicted RBP6.56□□□□□ -1.36
SF3B3-214ENST00000572365 BADQ92934 168 aa6.56□□□□□ -1.36
SF3B3-214ENST00000572365 FERMT2Q96AC1 680 aa6.56□□□□□ -1.36
SF3B3-214ENST00000572365 EAF2Q96CJ1 260 aaPredicted RBP6.56□□□□□ -1.36
SF3B3-214ENST00000572365 RAX2Q96IS3 184 aa6.56□□□□□ -1.36
SF3B3-214ENST00000572365 BTBD2Q9BX70 525 aa6.56□□□□□ -1.36
SF3B3-214ENST00000572365 EPB41L4BQ9H329 900 aa6.56□□□□□ -1.36
SF3B3-214ENST00000572365 NSUN3Q9H649 340 aaKnown RBP6.56□□□□□ -1.36
SF3B3-214ENST00000572365 DCP1AQ9NPI6 582 aaPredicted RBP6.56□□□□□ -1.36
SF3B3-214ENST00000572365 GEMIN8Q9NWZ8 242 aaKnown RBP6.56□□□□□ -1.36
SF3B3-214ENST00000572365 IP6K2Q9UHH9 426 aa6.56□□□□□ -1.36
SF3B3-214ENST00000572365 DENND2AQ9ULE3 1009 aa6.56□□□□□ -1.36
SF3B3-214ENST00000572365 ARAP2Q8WZ64 1704 aa6.56□□□□□ -1.36
SF3B3-214ENST00000572365 USP34Q70CQ2 3546 aa6.55□□□□□ -1.36
SF3B3-214ENST00000572365 GRXCR1A8MXD5 290 aa6.55□□□□□ -1.36
SF3B3-214ENST00000572365 SEMA7AO75326 666 aa6.55□□□□□ -1.36
SF3B3-214ENST00000572365 APOL3O95236 402 aa6.55□□□□□ -1.36
SF3B3-214ENST00000572365 PFKMP08237 780 aa6.55□□□□□ -1.36
SF3B3-214ENST00000572365 AGXTP21549 392 aa6.55□□□□□ -1.36
SF3B3-214ENST00000572365 PPP2R1AP30153 589 aa6.55□□□□□ -1.36
SF3B3-214ENST00000572365 ITGA1P56199 1179 aa6.55□□□□□ -1.36
SF3B3-214ENST00000572365 BCAR1P56945 870 aa6.55□□□□□ -1.36
SF3B3-214ENST00000572365 SRSF2Q01130 221 aaKnown RBP6.55□□□□□ -1.36
SF3B3-214ENST00000572365 PPATQ06203 517 aa6.55□□□□□ -1.36
SF3B3-214ENST00000572365 CHAF1AQ13111 956 aaPredicted RBP6.55□□□□□ -1.36
SF3B3-214ENST00000572365 TNFAIP1Q13829 316 aa6.55□□□□□ -1.36
SF3B3-214ENST00000572365 MFSD14BQ5SR56 506 aa6.55□□□□□ -1.36
SF3B3-214ENST00000572365 LYSMD2Q8IV50 215 aa6.55□□□□□ -1.36
SF3B3-214ENST00000572365 IGDCC3Q8IVU1 814 aa6.55□□□□□ -1.36
SF3B3-214ENST00000572365 TCEAL8Q8IYN2 117 aa6.55□□□□□ -1.36
SF3B3-214ENST00000572365 CMTR2Q8IYT2 770 aaKnown RBP6.55□□□□□ -1.36
SF3B3-214ENST00000572365 MZB1Q8WU39 189 aa6.55□□□□□ -1.36
SF3B3-214ENST00000572365 RSAD2Q8WXG1 361 aa6.55□□□□□ -1.36
SF3B3-214ENST00000572365 COA7Q96BR5 231 aa6.55□□□□□ -1.36
SF3B3-214ENST00000572365 PLEKHF1Q96S99 279 aa6.55□□□□□ -1.36
SF3B3-214ENST00000572365 DIRC2Q96SL1 478 aa6.55□□□□□ -1.36
SF3B3-214ENST00000572365 PITHD1Q9GZP4 211 aaPredicted RBP6.55□□□□□ -1.36
SF3B3-214ENST00000572365 OR10A5Q9H207 317 aa6.55□□□□□ -1.36
SF3B3-214ENST00000572365 PRDM12Q9H4Q4 367 aa6.55□□□□□ -1.36
SF3B3-214ENST00000572365 CWC25Q9NXE8 425 aaPredicted RBP6.55□□□□□ -1.36
SF3B3-214ENST00000572365 OGDHLQ9ULD0 1010 aa6.55□□□□□ -1.36
SF3B3-214ENST00000572365 ATP11BQ9Y2G3 1177 aa6.55□□□□□ -1.36
SF3B3-214ENST00000572365 ANKRD6Q9Y2G4 727 aa6.55□□□□□ -1.36
SF3B3-214ENST00000572365 GIT1Q9Y2X7 761 aa6.55□□□□□ -1.36
SF3B3-214ENST00000572365 ZHX2Q9Y6X8 837 aa6.55□□□□□ -1.36
SF3B3-214ENST00000572365 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.55□□□□□ -1.36
SF3B3-214ENST00000572365 XPOTO43592 962 aaKnown RBP6.54□□□□□ -1.36
SF3B3-214ENST00000572365 IL18BPO95998 194 aa6.54□□□□□ -1.36
SF3B3-214ENST00000572365 MTHFD2P13995 350 aa6.54□□□□□ -1.36
SF3B3-214ENST00000572365 APEX1P27695 318 aaKnown RBP6.54□□□□□ -1.36
SF3B3-214ENST00000572365 IGHMBP2P38935 993 aaKnown RBP6.54□□□□□ -1.36
SF3B3-214ENST00000572365 GYG1P46976 350 aa6.54□□□□□ -1.36
SF3B3-214ENST00000572365 MRE11P49959 708 aa6.54□□□□□ -1.36
SF3B3-214ENST00000572365 IRAK1P51617 712 aa6.54□□□□□ -1.36
SF3B3-214ENST00000572365 KCNQ1P51787 676 aa6.54□□□□□ -1.36
SF3B3-214ENST00000572365 EPHB4P54760 987 aa6.54□□□□□ -1.36
SF3B3-214ENST00000572365 NCKAP1LP55160 1127 aa6.54□□□□□ -1.36
SF3B3-214ENST00000572365 ADAM9Q13443 819 aa6.54□□□□□ -1.36
SF3B3-214ENST00000572365 NOLC1Q14978 699 aaKnown RBP eCLIP6.54□□□□□ -1.36
SF3B3-214ENST00000572365 CLUL1Q15846 466 aa6.54□□□□□ -1.36
SF3B3-214ENST00000572365 CCL14Q16627 93 aa6.54□□□□□ -1.36
SF3B3-214ENST00000572365 TOR2AQ5JU69 321 aa6.54□□□□□ -1.36
SF3B3-214ENST00000572365 ERICH6BQ5W0A0 696 aa6.54□□□□□ -1.36
SF3B3-214ENST00000572365 ANO1Q5XXA6 986 aa6.54□□□□□ -1.36
SF3B3-214ENST00000572365 KANK2Q63ZY3 851 aa6.54□□□□□ -1.36
SF3B3-214ENST00000572365 SLC41A1Q8IVJ1 513 aa6.54□□□□□ -1.36
SF3B3-214ENST00000572365 ZFPM1Q8IX07 1006 aa6.54□□□□□ -1.36
SF3B3-214ENST00000572365 MYO1HQ8N1T3 1032 aa6.54□□□□□ -1.36
SF3B3-214ENST00000572365 SMCR8Q8TEV9 937 aaPredicted RBP6.54□□□□□ -1.36
SF3B3-214ENST00000572365 TRIB2Q92519 343 aa6.54□□□□□ -1.36
SF3B3-214ENST00000572365 JADE3Q92613 823 aa6.54□□□□□ -1.36
SF3B3-214ENST00000572365 TEKT5Q96M29 485 aa6.54□□□□□ -1.36
SF3B3-214ENST00000572365 PARK7Q99497 189 aaKnown RBP6.54□□□□□ -1.36
SF3B3-214ENST00000572365 MPHOSPH8Q99549 860 aa6.54□□□□□ -1.36
SF3B3-214ENST00000572365 NUP88Q99567 741 aaPredicted RBP6.54□□□□□ -1.36
SF3B3-214ENST00000572365 GORASP1Q9BQQ3 440 aa6.54□□□□□ -1.36
SF3B3-214ENST00000572365 ZCCHC17Q9NP64 241 aaKnown RBP6.54□□□□□ -1.36
SF3B3-214ENST00000572365 ARHGAP20Q9P2F6 1191 aa6.54□□□□□ -1.36
SF3B3-214ENST00000572365 GJD2Q9UKL4 321 aa6.54□□□□□ -1.36
SF3B3-214ENST00000572365 PNMA8BQ9ULN7 279 aaPredicted RBP6.54□□□□□ -1.36
SF3B3-214ENST00000572365 INVSQ9Y283 1065 aa6.54□□□□□ -1.36
SF3B3-214ENST00000572365 GPR45Q9Y5Y3 372 aa6.54□□□□□ -1.36
SF3B3-214ENST00000572365 PTPRFP10586 1907 aa6.54□□□□□ -1.36
SF3B3-214ENST00000572365 FAM205AQ6ZU69 1335 aa6.53□□□□□ -1.36
SF3B3-214ENST00000572365 C5orf42Q9H799 3197 aa6.53□□□□□ -1.36
SF3B3-214ENST00000572365 PRRC2BQ5JSZ5 2229 aaKnown RBP6.53□□□□□ -1.36
SF3B3-214ENST00000572365 LTBP2Q14767 1821 aa6.53□□□□□ -1.36
SF3B3-214ENST00000572365 N4BP3O15049 544 aa6.53□□□□□ -1.36
SF3B3-214ENST00000572365 HMGCRP04035 888 aa6.53□□□□□ -1.36
SF3B3-214ENST00000572365 COL6A1P12109 1028 aa6.53□□□□□ -1.36
SF3B3-214ENST00000572365 MRPS5P82675 430 aaKnown RBP6.53□□□□□ -1.36
SF3B3-214ENST00000572365 TRIM25Q14258 630 aaKnown RBP6.53□□□□□ -1.36
SF3B3-214ENST00000572365 TREML2Q5T2D2 321 aa6.53□□□□□ -1.36
SF3B3-214ENST00000572365 CXorf57Q6NSI4 855 aaKnown RBP6.53□□□□□ -1.36
SF3B3-214ENST00000572365 UBE3BQ7Z3V4 1068 aa6.53□□□□□ -1.36
SF3B3-214ENST00000572365 WDR75Q8IWA0 830 aaKnown RBP6.53□□□□□ -1.36
SF3B3-214ENST00000572365 LINC00482Q8N8I6 264 aa6.53□□□□□ -1.36
SF3B3-214ENST00000572365 ANKS1AQ92625 1134 aa6.53□□□□□ -1.36
SF3B3-214ENST00000572365 HSPBAP1Q96EW2 488 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms