RNA–Protein interactions for RNA: ENST00000571212.1

KARSP3-201, Transcript of lysyl-tRNA synthetase pseudogene 3, humanhuman

BASIC

Gene KARSP3, Length 1,504 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP3-201ENST00000571212 PCDHAC2Q9Y5I4 1007 aa5.86□□□□□ -1.47
KARSP3-201ENST00000571212 HTTP42858 3142 aa5.86□□□□□ -1.47
KARSP3-201ENST00000571212 FAM205AQ6ZU69 1335 aa5.86□□□□□ -1.47
KARSP3-201ENST00000571212 TRIOBPQ9H2D6 2365 aa5.85□□□□□ -1.47
KARSP3-201ENST00000571212 SNAP23O00161 211 aa5.85□□□□□ -1.47
KARSP3-201ENST00000571212 GRM8O00222 908 aa5.85□□□□□ -1.47
KARSP3-201ENST00000571212 PLD2O14939 933 aa5.85□□□□□ -1.47
KARSP3-201ENST00000571212 TAF5LO75529 589 aa5.85□□□□□ -1.47
KARSP3-201ENST00000571212 DNAJC8O75937 253 aaPredicted RBP5.85□□□□□ -1.47
KARSP3-201ENST00000571212 NPTXRO95502 500 aa5.85□□□□□ -1.47
KARSP3-201ENST00000571212 RPS19P39019 145 aaKnown RBP5.85□□□□□ -1.47
KARSP3-201ENST00000571212 KIF11P52732 1056 aa5.85□□□□□ -1.47
KARSP3-201ENST00000571212 RBM5P52756 815 aaKnown RBP eCLIP5.85□□□□□ -1.47
KARSP3-201ENST00000571212 ANTXR2P58335 489 aa5.85□□□□□ -1.47
KARSP3-201ENST00000571212 MIIPQ5JXC2 388 aa5.85□□□□□ -1.47
KARSP3-201ENST00000571212 C20orf194Q5TEA3 1177 aa5.85□□□□□ -1.47
KARSP3-201ENST00000571212 ZCCHC8Q6NZY4 707 aaKnown RBP5.85□□□□□ -1.47
KARSP3-201ENST00000571212 CC2D1AQ6P1N0 951 aaPredicted RBP5.85□□□□□ -1.47
KARSP3-201ENST00000571212 C1orf210Q8IVY1 113 aa5.85□□□□□ -1.47
KARSP3-201ENST00000571212 CALML6Q8TD86 181 aa5.85□□□□□ -1.47
KARSP3-201ENST00000571212 OPTNQ96CV9 577 aa5.85□□□□□ -1.47
KARSP3-201ENST00000571212 ZNF333Q96JL9 665 aa5.85□□□□□ -1.47
KARSP3-201ENST00000571212 CSRNP2Q9H175 543 aa5.85□□□□□ -1.47
KARSP3-201ENST00000571212 TLR9Q9NR96 1032 aa5.85□□□□□ -1.47
KARSP3-201ENST00000571212 ZBTB40Q9NUA8 1239 aa5.85□□□□□ -1.47
KARSP3-201ENST00000571212 ZNF70Q9UC06 446 aaPredicted RBP5.85□□□□□ -1.47
KARSP3-201ENST00000571212 TNPO3Q9Y5L0 923 aaKnown RBP5.85□□□□□ -1.47
KARSP3-201ENST00000571212 AOX1Q06278 1338 aa5.85□□□□□ -1.47
KARSP3-201ENST00000571212 PPP1R12AO14974 1030 aaPredicted RBP5.84□□□□□ -1.47
KARSP3-201ENST00000571212 SLC26A4O43511 780 aa5.84□□□□□ -1.47
KARSP3-201ENST00000571212 PLIN1O60240 522 aa5.84□□□□□ -1.47
KARSP3-201ENST00000571212 NBPF7P0C2Y1 421 aaPredicted RBP5.84□□□□□ -1.47
KARSP3-201ENST00000571212 HIBADHP31937 336 aaKnown RBP5.84□□□□□ -1.47
KARSP3-201ENST00000571212 FXR1P51114 621 aaKnown RBP eCLIP5.84□□□□□ -1.47
KARSP3-201ENST00000571212 ATP2C1P98194 919 aaPredicted RBP5.84□□□□□ -1.47
KARSP3-201ENST00000571212 SLC6A3Q01959 620 aa5.84□□□□□ -1.47
KARSP3-201ENST00000571212 MVPQ14764 893 aaKnown RBP5.84□□□□□ -1.47
KARSP3-201ENST00000571212 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.84□□□□□ -1.47
KARSP3-201ENST00000571212 SHCBP1Q8NEM2 672 aa5.84□□□□□ -1.47
KARSP3-201ENST00000571212 TDRD7Q8NHU6 1098 aaKnown RBP5.84□□□□□ -1.47
KARSP3-201ENST00000571212 BRI3BPQ8WY22 251 aa5.84□□□□□ -1.47
KARSP3-201ENST00000571212 CTDP1Q9Y5B0 961 aaPredicted RBP5.84□□□□□ -1.47
KARSP3-201ENST00000571212 MKI67P46013 3256 aaKnown RBP5.84□□□□□ -1.48
KARSP3-201ENST00000571212 CCL15-CCL14A0A0B4J2E2 113 aa5.84□□□□□ -1.48
KARSP3-201ENST00000571212 PTPDC1A2A3K4 754 aa5.84□□□□□ -1.48
KARSP3-201ENST00000571212 SUV39H1O43463 412 aa5.84□□□□□ -1.48
KARSP3-201ENST00000571212 OPA1O60313 960 aa5.84□□□□□ -1.48
KARSP3-201ENST00000571212 WDHD1O75717 1129 aaPredicted RBP5.84□□□□□ -1.48
KARSP3-201ENST00000571212 PRLP01236 227 aa5.84□□□□□ -1.48
KARSP3-201ENST00000571212 SDSP20132 328 aa5.84□□□□□ -1.48
KARSP3-201ENST00000571212 PTX3P26022 381 aaPredicted RBP5.84□□□□□ -1.48
KARSP3-201ENST00000571212 RIN1Q13671 783 aa5.84□□□□□ -1.48
KARSP3-201ENST00000571212 UBE4AQ14139 1066 aa5.84□□□□□ -1.48
KARSP3-201ENST00000571212 CCL15Q16663 113 aa5.84□□□□□ -1.48
KARSP3-201ENST00000571212 CCDC57Q2TAC2 916 aa5.84□□□□□ -1.48
KARSP3-201ENST00000571212 SLC4A8Q2Y0W8 1093 aa5.84□□□□□ -1.48
KARSP3-201ENST00000571212 SLC9C1Q4G0N8 1177 aa5.84□□□□□ -1.48
KARSP3-201ENST00000571212 MFSD14BQ5SR56 506 aa5.84□□□□□ -1.48
KARSP3-201ENST00000571212 SPTY2D1Q68D10 685 aaPredicted RBP5.84□□□□□ -1.48
KARSP3-201ENST00000571212 LMBR1LQ6UX01 489 aa5.84□□□□□ -1.48
KARSP3-201ENST00000571212 LDHAL6AQ6ZMR3 332 aa5.84□□□□□ -1.48
KARSP3-201ENST00000571212 USP51Q70EK9 711 aa5.84□□□□□ -1.48
KARSP3-201ENST00000571212 DDX53Q86TM3 631 aaKnown RBP5.84□□□□□ -1.48
KARSP3-201ENST00000571212 SGMS1Q86VZ5 419 aa5.84□□□□□ -1.48
KARSP3-201ENST00000571212 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.84□□□□□ -1.48
KARSP3-201ENST00000571212 FRAT1Q92837 279 aaPredicted RBP5.84□□□□□ -1.48
KARSP3-201ENST00000571212 MEIS3Q99687 375 aa5.84□□□□□ -1.48
KARSP3-201ENST00000571212 TDRD3Q9H7E2 651 aaKnown RBP5.84□□□□□ -1.48
KARSP3-201ENST00000571212 ZCCHC17Q9NP64 241 aaKnown RBP5.84□□□□□ -1.48
KARSP3-201ENST00000571212 CNNM1Q9NRU3 951 aa5.84□□□□□ -1.48
KARSP3-201ENST00000571212 AK9Q5TCS8 1911 aa5.83□□□□□ -1.48
KARSP3-201ENST00000571212 ZSWIM8A7E2V4 1837 aa5.83□□□□□ -1.48
KARSP3-201ENST00000571212 C2orf78A6NCI8 922 aa5.83□□□□□ -1.48
KARSP3-201ENST00000571212 TCP10L2B9ZVM9 353 aa5.83□□□□□ -1.48
KARSP3-201ENST00000571212 GNAI3P08754 354 aa5.83□□□□□ -1.48
KARSP3-201ENST00000571212 CETPP11597 493 aa5.83□□□□□ -1.48
KARSP3-201ENST00000571212 IGFALSP35858 605 aa5.83□□□□□ -1.48
KARSP3-201ENST00000571212 RFX5P48382 616 aaPredicted RBP5.83□□□□□ -1.48
KARSP3-201ENST00000571212 PRMT2P55345 433 aa5.83□□□□□ -1.48
KARSP3-201ENST00000571212 PTH1RQ03431 593 aa5.83□□□□□ -1.48
KARSP3-201ENST00000571212 VGLL4Q14135 290 aa5.83□□□□□ -1.48
KARSP3-201ENST00000571212 KIF22Q14807 665 aa5.83□□□□□ -1.48
KARSP3-201ENST00000571212 LSM12Q3MHD2 195 aaKnown RBP5.83□□□□□ -1.48
KARSP3-201ENST00000571212 EPHA10Q5JZY3 1008 aa5.83□□□□□ -1.48
KARSP3-201ENST00000571212 FAM43AQ8N2R8 423 aa5.83□□□□□ -1.48
KARSP3-201ENST00000571212 D2HGDHQ8N465 521 aa5.83□□□□□ -1.48
KARSP3-201ENST00000571212 ANKRD44Q8N8A2 993 aa5.83□□□□□ -1.48
KARSP3-201ENST00000571212 CHST14Q8NCH0 376 aa5.83□□□□□ -1.48
KARSP3-201ENST00000571212 SUCLG2Q96I99 432 aa5.83□□□□□ -1.48
KARSP3-201ENST00000571212 FAM84BQ96KN1 310 aaPredicted RBP5.83□□□□□ -1.48
KARSP3-201ENST00000571212 PLEKHG4BQ96PX9 1271 aa5.83□□□□□ -1.48
KARSP3-201ENST00000571212 FOXB1Q99853 325 aa5.83□□□□□ -1.48
KARSP3-201ENST00000571212 PIF1Q9H611 641 aa5.83□□□□□ -1.48
KARSP3-201ENST00000571212 DDX19BQ9UMR2 479 aa5.83□□□□□ -1.48
KARSP3-201ENST00000571212 CENPFP49454 3210 aa5.82□□□□□ -1.48
KARSP3-201ENST00000571212 MYH13Q9UKX3 1938 aa5.82□□□□□ -1.48
KARSP3-201ENST00000571212 NARSO43776 548 aaKnown RBP5.82□□□□□ -1.48
KARSP3-201ENST00000571212 TLR2O60603 784 aa5.82□□□□□ -1.48
KARSP3-201ENST00000571212 ACRV1P26436 265 aa5.82□□□□□ -1.48
KARSP3-201ENST00000571212 GYG1P46976 350 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms