RNA–Protein interactions for RNA: ENST00000570513.5

CALCOCO2-225, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 4

Gene CALCOCO2, Length 553 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-225ENST00000570513 LRRC43Q8N309 656 aa12.37□□□□□ -0.43
CALCOCO2-225ENST00000570513 TAF4BQ92750 862 aa12.37□□□□□ -0.43
CALCOCO2-225ENST00000570513 CASD1Q96PB1 797 aa12.37□□□□□ -0.43
CALCOCO2-225ENST00000570513 SPAG5Q96R06 1193 aa12.37□□□□□ -0.43
CALCOCO2-225ENST00000570513 LBHD1Q9BQE6 289 aaPredicted RBP12.37□□□□□ -0.43
CALCOCO2-225ENST00000570513 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.37□□□□□ -0.43
CALCOCO2-225ENST00000570513 MRPL9Q9BYD2 267 aaKnown RBP12.37□□□□□ -0.43
CALCOCO2-225ENST00000570513 EDEM3Q9BZQ6 932 aa12.37□□□□□ -0.43
CALCOCO2-225ENST00000570513 SMYD3Q9H7B4 428 aa12.37□□□□□ -0.43
CALCOCO2-225ENST00000570513 VRTNQ9H8Y1 702 aa12.37□□□□□ -0.43
CALCOCO2-225ENST00000570513 ABHD10Q9NUJ1 306 aa12.37□□□□□ -0.43
CALCOCO2-225ENST00000570513 NXF1Q9UBU9 619 aaKnown RBP12.37□□□□□ -0.43
CALCOCO2-225ENST00000570513 LUC7L2Q9Y383 392 aaKnown RBP12.37□□□□□ -0.43
CALCOCO2-225ENST00000570513 TTC3P53804 2025 aa12.37□□□□□ -0.43
CALCOCO2-225ENST00000570513 PIRO00625 290 aa12.36□□□□□ -0.43
CALCOCO2-225ENST00000570513 STAU1O95793 577 aaKnown RBP12.36□□□□□ -0.43
CALCOCO2-225ENST00000570513 FGBP02675 491 aa12.36□□□□□ -0.43
CALCOCO2-225ENST00000570513 TBXAS1P24557 533 aaPredicted RBP12.36□□□□□ -0.43
CALCOCO2-225ENST00000570513 PNPLA4P41247 253 aa12.36□□□□□ -0.43
CALCOCO2-225ENST00000570513 RAP1GAPP47736 663 aa12.36□□□□□ -0.43
CALCOCO2-225ENST00000570513 TAF6P49848 677 aa12.36□□□□□ -0.43
CALCOCO2-225ENST00000570513 CLCNKBP51801 687 aa12.36□□□□□ -0.43
CALCOCO2-225ENST00000570513 TNNC1P63316 161 aa12.36□□□□□ -0.43
CALCOCO2-225ENST00000570513 MYO1EQ12965 1108 aa12.36□□□□□ -0.43
CALCOCO2-225ENST00000570513 DRAP1Q14919 205 aaPredicted RBP12.36□□□□□ -0.43
CALCOCO2-225ENST00000570513 WDR72Q3MJ13 1102 aa12.36□□□□□ -0.43
CALCOCO2-225ENST00000570513 TMEM240Q5SV17 173 aa12.36□□□□□ -0.43
CALCOCO2-225ENST00000570513 ZNF280BQ86YH2 543 aa12.36□□□□□ -0.43
CALCOCO2-225ENST00000570513 C3orf58Q8NDZ4 430 aa12.36□□□□□ -0.43
CALCOCO2-225ENST00000570513 RABGGTAQ92696 567 aa12.36□□□□□ -0.43
CALCOCO2-225ENST00000570513 DNAJC7Q99615 494 aa12.36□□□□□ -0.43
CALCOCO2-225ENST00000570513 PAAF1Q9BRP4 392 aa12.36□□□□□ -0.43
CALCOCO2-225ENST00000570513 GPR88Q9GZN0 384 aa12.36□□□□□ -0.43
CALCOCO2-225ENST00000570513 CXXC1Q9P0U4 656 aaPredicted RBP12.36□□□□□ -0.43
CALCOCO2-225ENST00000570513 F8W810 466 aa12.35□□□□□ -0.43
CALCOCO2-225ENST00000570513 SPTLC1O15269 473 aa12.35□□□□□ -0.43
CALCOCO2-225ENST00000570513 DGKIO75912 1065 aa12.35□□□□□ -0.43
CALCOCO2-225ENST00000570513 DDHD2O94830 711 aa12.35□□□□□ -0.43
CALCOCO2-225ENST00000570513 KIF4AO95239 1232 aa12.35□□□□□ -0.43
CALCOCO2-225ENST00000570513 IGFBP6P24592 240 aaPredicted RBP12.35□□□□□ -0.43
CALCOCO2-225ENST00000570513 MFAP3P55082 362 aa12.35□□□□□ -0.43
CALCOCO2-225ENST00000570513 ASIC2Q16515 512 aa12.35□□□□□ -0.43
CALCOCO2-225ENST00000570513 UPP1Q16831 310 aa12.35□□□□□ -0.43
CALCOCO2-225ENST00000570513 SV2CQ496J9 727 aa12.35□□□□□ -0.43
CALCOCO2-225ENST00000570513 ENOSF1Q7L5Y1 443 aa12.35□□□□□ -0.43
CALCOCO2-225ENST00000570513 COLGALT2Q8IYK4 626 aa12.35□□□□□ -0.43
CALCOCO2-225ENST00000570513 UBR7Q8N806 425 aa12.35□□□□□ -0.43
CALCOCO2-225ENST00000570513 ZNF397Q8NF99 534 aaPredicted RBP12.35□□□□□ -0.43
CALCOCO2-225ENST00000570513 RSPH1Q8WYR4 309 aa12.35□□□□□ -0.43
CALCOCO2-225ENST00000570513 SHC3Q92529 594 aa12.35□□□□□ -0.43
CALCOCO2-225ENST00000570513 TOP1MTQ969P6 601 aa12.35□□□□□ -0.43
CALCOCO2-225ENST00000570513 UROC1Q96N76 676 aa12.35□□□□□ -0.43
CALCOCO2-225ENST00000570513 FAM193BQ96PV7 902 aaPredicted RBP12.35□□□□□ -0.43
CALCOCO2-225ENST00000570513 STK33Q9BYT3 514 aa12.35□□□□□ -0.43
CALCOCO2-225ENST00000570513 BCO2Q9BYV7 579 aa12.35□□□□□ -0.43
CALCOCO2-225ENST00000570513 SDCBP2Q9H190 292 aa12.35□□□□□ -0.43
CALCOCO2-225ENST00000570513 RC3H2Q9HBD1 1191 aaKnown RBP12.35□□□□□ -0.43
CALCOCO2-225ENST00000570513 KANSL3Q9P2N6 904 aa12.35□□□□□ -0.43
CALCOCO2-225ENST00000570513 DNAJB4Q9UDY4 337 aa12.35□□□□□ -0.43
CALCOCO2-225ENST00000570513 MYO6Q9UM54 1294 aa12.35□□□□□ -0.43
CALCOCO2-225ENST00000570513 PRG3Q9Y2Y8 225 aaPredicted RBP12.35□□□□□ -0.43
CALCOCO2-225ENST00000570513 NR2E3Q9Y5X4 410 aa12.35□□□□□ -0.43
CALCOCO2-225ENST00000570513 TRIP11Q15643 1979 aa12.35□□□□□ -0.43
CALCOCO2-225ENST00000570513 PTPRSQ13332 1948 aa12.35□□□□□ -0.43
CALCOCO2-225ENST00000570513 WEE2P0C1S8 567 aa12.34□□□□□ -0.43
CALCOCO2-225ENST00000570513 KRT5P13647 590 aa12.34□□□□□ -0.43
CALCOCO2-225ENST00000570513 P4HA1P13674 534 aa12.34□□□□□ -0.43
CALCOCO2-225ENST00000570513 CD58P19256 250 aa12.34□□□□□ -0.43
CALCOCO2-225ENST00000570513 ACO1P21399 889 aaKnown RBP12.34□□□□□ -0.43
CALCOCO2-225ENST00000570513 RPL9P32969 192 aaKnown RBP12.34□□□□□ -0.43
CALCOCO2-225ENST00000570513 SOX5P35711 763 aa12.34□□□□□ -0.43
CALCOCO2-225ENST00000570513 STAT1P42224 750 aa12.34□□□□□ -0.43
CALCOCO2-225ENST00000570513 MAGEA10P43363 369 aaPredicted RBP12.34□□□□□ -0.43
CALCOCO2-225ENST00000570513 SFMBT2Q5VUG0 894 aa12.34□□□□□ -0.43
CALCOCO2-225ENST00000570513 OR8K1Q8NGG5 319 aa12.34□□□□□ -0.43
CALCOCO2-225ENST00000570513 HASPINQ8TF76 798 aa12.34□□□□□ -0.43
CALCOCO2-225ENST00000570513 HERVK_113Q902F9 699 aa12.34□□□□□ -0.43
CALCOCO2-225ENST00000570513 DDX27Q96GQ7 796 aaKnown RBP12.34□□□□□ -0.43
CALCOCO2-225ENST00000570513 FAM81BQ96LP2 452 aa12.34□□□□□ -0.43
CALCOCO2-225ENST00000570513 PANX2Q96RD6 677 aa12.34□□□□□ -0.43
CALCOCO2-225ENST00000570513 KCNF1Q9H3M0 494 aa12.34□□□□□ -0.43
CALCOCO2-225ENST00000570513 NRDE2Q9H7Z3 1164 aa12.34□□□□□ -0.43
CALCOCO2-225ENST00000570513 SNX9Q9Y5X1 595 aa12.34□□□□□ -0.43
CALCOCO2-225ENST00000570513 TDRD15B5MCY1 1934 aaKnown RBP12.34□□□□□ -0.43
CALCOCO2-225ENST00000570513 MKI67P46013 3256 aaKnown RBP12.34□□□□□ -0.43
CALCOCO2-225ENST00000570513 TSC2P49815 1807 aa12.33□□□□□ -0.44
CALCOCO2-225ENST00000570513 KPNA7A9QM74 516 aa12.33□□□□□ -0.44
CALCOCO2-225ENST00000570513 I3L4J1 428 aa12.33□□□□□ -0.44
CALCOCO2-225ENST00000570513 FOXN3O00409 490 aaPredicted RBP12.33□□□□□ -0.44
CALCOCO2-225ENST00000570513 B3GAT3O94766 335 aa12.33□□□□□ -0.44
CALCOCO2-225ENST00000570513 GFPT2O94808 682 aa12.33□□□□□ -0.44
CALCOCO2-225ENST00000570513 ITGB1P05556 798 aa12.33□□□□□ -0.44
CALCOCO2-225ENST00000570513 FECHP22830 423 aa12.33□□□□□ -0.44
CALCOCO2-225ENST00000570513 USP8P40818 1118 aa12.33□□□□□ -0.44
CALCOCO2-225ENST00000570513 OR1G1P47890 313 aa12.33□□□□□ -0.44
CALCOCO2-225ENST00000570513 SLC11A1P49279 550 aa12.33□□□□□ -0.44
CALCOCO2-225ENST00000570513 AARSP49588 968 aaKnown RBP eCLIP12.33□□□□□ -0.44
CALCOCO2-225ENST00000570513 LILRA4P59901 499 aa12.33□□□□□ -0.44
CALCOCO2-225ENST00000570513 ARID5AQ03989 594 aa12.33□□□□□ -0.44
CALCOCO2-225ENST00000570513 FAM71AQ8IYT1 594 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms