RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 UMODL1Q5DID0 1318 aa14.73□□□□□ -0.05
TPM1-215ENST00000558868 EFCAB8A8MWE9 144 aa14.73□□□□□ -0.05
TPM1-215ENST00000558868 TLR3O15455 904 aaKnown RBP14.73□□□□□ -0.05
TPM1-215ENST00000558868 MEFVO15553 781 aaPredicted RBP14.73□□□□□ -0.05
TPM1-215ENST00000558868 CD4P01730 458 aa14.73□□□□□ -0.05
TPM1-215ENST00000558868 MYBL1P10243 752 aa14.73□□□□□ -0.05
TPM1-215ENST00000558868 ATF7P17544 494 aaPredicted RBP14.73□□□□□ -0.05
TPM1-215ENST00000558868 GNA15P30679 374 aa14.73□□□□□ -0.05
TPM1-215ENST00000558868 HADHBP55084 474 aaKnown RBP14.73□□□□□ -0.05
TPM1-215ENST00000558868 MGAT3Q09327 533 aa14.73□□□□□ -0.05
TPM1-215ENST00000558868 UBXN11Q5T124 520 aa14.73□□□□□ -0.05
TPM1-215ENST00000558868 TWF2Q6IBS0 349 aaKnown RBP14.73□□□□□ -0.05
TPM1-215ENST00000558868 ALKAL1Q6UXT8 129 aa14.73□□□□□ -0.05
TPM1-215ENST00000558868 ELMO3Q96BJ8 720 aa14.73□□□□□ -0.05
TPM1-215ENST00000558868 HPDLQ96IR7 371 aa14.73□□□□□ -0.05
TPM1-215ENST00000558868 RPGRIP1Q96KN7 1286 aa14.73□□□□□ -0.05
TPM1-215ENST00000558868 PCDHB18PQ96TA0 734 aa14.73□□□□□ -0.05
TPM1-215ENST00000558868 BCO2Q9BYV7 579 aa14.73□□□□□ -0.05
TPM1-215ENST00000558868 UBQLN1Q9UMX0 589 aaKnown RBP14.73□□□□□ -0.05
TPM1-215ENST00000558868 SNX12Q9UMY4 172 aa14.73□□□□□ -0.05
TPM1-215ENST00000558868 AGAP1Q9UPQ3 857 aa14.73□□□□□ -0.05
TPM1-215ENST00000558868 SQORQ9Y6N5 450 aa14.73□□□□□ -0.05
TPM1-215ENST00000558868 CITO14578 2027 aa14.73□□□□□ -0.05
TPM1-215ENST00000558868 GRIN2DO15399 1336 aa14.72□□□□□ -0.05
TPM1-215ENST00000558868 GRID2IPA4D2P6 1211 aa14.72□□□□□ -0.05
TPM1-215ENST00000558868 ENC1O14682 589 aa14.72□□□□□ -0.05
TPM1-215ENST00000558868 THAP12O43422 761 aa14.72□□□□□ -0.05
TPM1-215ENST00000558868 MED7O43513 233 aa14.72□□□□□ -0.05
TPM1-215ENST00000558868 RECQL4O94761 1208 aa14.72□□□□□ -0.05
TPM1-215ENST00000558868 PAEPP09466 180 aa14.72□□□□□ -0.05
TPM1-215ENST00000558868 KCNE1P15382 129 aa14.72□□□□□ -0.05
TPM1-215ENST00000558868 ZSCAN20P17040 1043 aaPredicted RBP14.72□□□□□ -0.05
TPM1-215ENST00000558868 ABCB4P21439 1286 aa14.72□□□□□ -0.05
TPM1-215ENST00000558868 POLR2BP30876 1174 aaKnown RBP14.72□□□□□ -0.05
TPM1-215ENST00000558868 THPOP40225 353 aa14.72□□□□□ -0.05
TPM1-215ENST00000558868 ASPAP45381 313 aa14.72□□□□□ -0.05
TPM1-215ENST00000558868 TNNC1P63316 161 aa14.72□□□□□ -0.05
TPM1-215ENST00000558868 ZBTB6Q15916 424 aa14.72□□□□□ -0.05
TPM1-215ENST00000558868 WDR72Q3MJ13 1102 aa14.72□□□□□ -0.05
TPM1-215ENST00000558868 XKR4Q5GH76 650 aa14.72□□□□□ -0.05
TPM1-215ENST00000558868 FAM26DQ5JW98 314 aa14.72□□□□□ -0.05
TPM1-215ENST00000558868 LRRC52Q8N7C0 313 aa14.72□□□□□ -0.05
TPM1-215ENST00000558868 USP38Q8NB14 1042 aa14.72□□□□□ -0.05
TPM1-215ENST00000558868 TPCN2Q8NHX9 752 aa14.72□□□□□ -0.05
TPM1-215ENST00000558868 CXorf38Q8TB03 319 aa14.72□□□□□ -0.05
TPM1-215ENST00000558868 SLC35G2Q8TBE7 412 aa14.72□□□□□ -0.05
TPM1-215ENST00000558868 UBXN4Q92575 508 aa14.72□□□□□ -0.05
TPM1-215ENST00000558868 DNAI2Q9GZS0 605 aa14.72□□□□□ -0.05
TPM1-215ENST00000558868 NXF3Q9H4D5 531 aaKnown RBP14.72□□□□□ -0.05
TPM1-215ENST00000558868 TAS2R14Q9NYV8 317 aa14.72□□□□□ -0.05
TPM1-215ENST00000558868 RNF14Q9UBS8 474 aa14.72□□□□□ -0.05
TPM1-215ENST00000558868 NXF1Q9UBU9 619 aaKnown RBP14.72□□□□□ -0.05
TPM1-215ENST00000558868 PARP2Q9UGN5 583 aa14.72□□□□□ -0.05
TPM1-215ENST00000558868 GTF3C4Q9UKN8 822 aa14.72□□□□□ -0.05
TPM1-215ENST00000558868 ST3GAL5Q9UNP4 418 aa14.72□□□□□ -0.05
TPM1-215ENST00000558868 TRIM17Q9Y577 477 aa14.72□□□□□ -0.05
TPM1-215ENST00000558868 CTAGE15A4D2H0 777 aa14.71□□□□□ -0.05
TPM1-215ENST00000558868 KBTBD13C9JR72 458 aa14.71□□□□□ -0.05
TPM1-215ENST00000558868 MTA2O94776 668 aa14.71□□□□□ -0.05
TPM1-215ENST00000558868 LSM8O95777 96 aaKnown RBP14.71□□□□□ -0.05
TPM1-215ENST00000558868 CHRNA1P02708 482 aa14.71□□□□□ -0.05
TPM1-215ENST00000558868 CYP1A1P04798 512 aaPredicted RBP14.71□□□□□ -0.05
TPM1-215ENST00000558868 CTAGE8P0CG41 777 aa14.71□□□□□ -0.05
TPM1-215ENST00000558868 CD58P19256 250 aa14.71□□□□□ -0.05
TPM1-215ENST00000558868 CYP3A5P20815 502 aa14.71□□□□□ -0.05
TPM1-215ENST00000558868 PNPLA4P41247 253 aa14.71□□□□□ -0.05
TPM1-215ENST00000558868 NSFP46459 744 aaKnown RBP14.71□□□□□ -0.05
TPM1-215ENST00000558868 RAB27AP51159 221 aa14.71□□□□□ -0.05
TPM1-215ENST00000558868 MEI1Q5TIA1 1274 aa14.71□□□□□ -0.05
TPM1-215ENST00000558868 LIN9Q5TKA1 542 aa14.71□□□□□ -0.05
TPM1-215ENST00000558868 LHX8Q68G74 356 aa14.71□□□□□ -0.05
TPM1-215ENST00000558868 SLFN11Q7Z7L1 901 aa14.71□□□□□ -0.05
TPM1-215ENST00000558868 CTAGE6Q86UF2 777 aa14.71□□□□□ -0.05
TPM1-215ENST00000558868 PALB2Q86YC2 1186 aa14.71□□□□□ -0.05
TPM1-215ENST00000558868 CTAGE4Q8IX94 777 aa14.71□□□□□ -0.05
TPM1-215ENST00000558868 GOLGA1Q92805 767 aa14.71□□□□□ -0.05
TPM1-215ENST00000558868 VCPIP1Q96JH7 1222 aa14.71□□□□□ -0.05
TPM1-215ENST00000558868 ZNF518BQ9C0D4 1074 aa14.71□□□□□ -0.05
TPM1-215ENST00000558868 THAP2Q9H0W7 228 aa14.71□□□□□ -0.05
TPM1-215ENST00000558868 CTTNBP2NLQ9P2B4 639 aa14.71□□□□□ -0.05
TPM1-215ENST00000558868 UVRAGQ9P2Y5 699 aa14.71□□□□□ -0.05
TPM1-215ENST00000558868 PUF60Q9UHX1 559 aaKnown RBP14.71□□□□□ -0.05
TPM1-215ENST00000558868 IPPQ9Y573 584 aa14.71□□□□□ -0.05
TPM1-215ENST00000558868 CEP83Q9Y592 693 aa14.71□□□□□ -0.05
TPM1-215ENST00000558868 A0A0U1RQG5 324 aaPredicted RBP14.7□□□□□ -0.06
TPM1-215ENST00000558868 CES2O00748 559 aa14.7□□□□□ -0.06
TPM1-215ENST00000558868 TADA3O75528 432 aa14.7□□□□□ -0.06
TPM1-215ENST00000558868 CYP1A2P05177 515 aa14.7□□□□□ -0.06
TPM1-215ENST00000558868 CTSHP09668 335 aa14.7□□□□□ -0.06
TPM1-215ENST00000558868 WEE2P0C1S8 567 aa14.7□□□□□ -0.06
TPM1-215ENST00000558868 SKIP12755 728 aa14.7□□□□□ -0.06
TPM1-215ENST00000558868 UNGP13051 313 aaPredicted RBP14.7□□□□□ -0.06
TPM1-215ENST00000558868 CENPCQ03188 943 aa14.7□□□□□ -0.06
TPM1-215ENST00000558868 NFX1Q12986 1120 aaKnown RBP14.7□□□□□ -0.06
TPM1-215ENST00000558868 RPS6KA1Q15418 735 aa14.7□□□□□ -0.06
TPM1-215ENST00000558868 SCARA5Q6ZMJ2 495 aa14.7□□□□□ -0.06
TPM1-215ENST00000558868 PEX26Q7Z412 305 aa14.7□□□□□ -0.06
TPM1-215ENST00000558868 DAAM2Q86T65 1068 aa14.7□□□□□ -0.06
TPM1-215ENST00000558868 LRRC57Q8N9N7 239 aa14.7□□□□□ -0.06
TPM1-215ENST00000558868 CAGE1Q8TC20 777 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms