RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 PCDHB2Q9Y5E7 798 aa10.87□□□□□ -0.67
HNRNPC-228ENST00000557033 LINC01565O15544 149 aa10.86□□□□□ -0.67
HNRNPC-228ENST00000557033 MBTPS2O43462 519 aa10.86□□□□□ -0.67
HNRNPC-228ENST00000557033 ERLIN2O94905 339 aa10.86□□□□□ -0.67
HNRNPC-228ENST00000557033 GJB6O95452 261 aa10.86□□□□□ -0.67
HNRNPC-228ENST00000557033 EYA4O95677 639 aa10.86□□□□□ -0.67
HNRNPC-228ENST00000557033 BMP6P22004 513 aa10.86□□□□□ -0.67
HNRNPC-228ENST00000557033 NDUFV1P49821 464 aa10.86□□□□□ -0.67
HNRNPC-228ENST00000557033 BCAR1P56945 870 aa10.86□□□□□ -0.67
HNRNPC-228ENST00000557033 COASYQ13057 564 aa10.86□□□□□ -0.67
HNRNPC-228ENST00000557033 SMAD4Q13485 552 aaKnown RBP10.86□□□□□ -0.67
HNRNPC-228ENST00000557033 TCEA2Q15560 299 aa10.86□□□□□ -0.67
HNRNPC-228ENST00000557033 SMAD2Q15796 467 aaKnown RBP10.86□□□□□ -0.67
HNRNPC-228ENST00000557033 DUSP6Q16828 381 aa10.86□□□□□ -0.67
HNRNPC-228ENST00000557033 NOMO2Q5JPE7 1267 aa10.86□□□□□ -0.67
HNRNPC-228ENST00000557033 TMEM184AQ6ZMB5 413 aa10.86□□□□□ -0.67
HNRNPC-228ENST00000557033 RBM23Q86U06 439 aaKnown RBP10.86□□□□□ -0.67
HNRNPC-228ENST00000557033 C4orf32Q8N8J7 132 aa10.86□□□□□ -0.67
HNRNPC-228ENST00000557033 TMEM102Q8N9M5 508 aaPredicted RBP10.86□□□□□ -0.67
HNRNPC-228ENST00000557033 MCPH1Q8NEM0 835 aa10.86□□□□□ -0.67
HNRNPC-228ENST00000557033 PIGOQ8TEQ8 1089 aa10.86□□□□□ -0.67
HNRNPC-228ENST00000557033 HPS1Q92902 700 aa10.86□□□□□ -0.67
HNRNPC-228ENST00000557033 CCDC51Q96ER9 411 aa10.86□□□□□ -0.67
HNRNPC-228ENST00000557033 MSLNLQ96KJ4 702 aa10.86□□□□□ -0.67
HNRNPC-228ENST00000557033 TCF25Q9BQ70 676 aa10.86□□□□□ -0.67
HNRNPC-228ENST00000557033 MINDY3Q9H8M7 445 aa10.86□□□□□ -0.67
HNRNPC-228ENST00000557033 GPAMQ9HCL2 828 aa10.86□□□□□ -0.67
HNRNPC-228ENST00000557033 CLEC1BQ9P126 229 aa10.86□□□□□ -0.67
HNRNPC-228ENST00000557033 STK39Q9UEW8 545 aa10.86□□□□□ -0.67
HNRNPC-228ENST00000557033 ARID2Q68CP9 1835 aa10.86□□□□□ -0.67
HNRNPC-228ENST00000557033 CNTNAP2Q9UHC6 1331 aa10.85□□□□□ -0.67
HNRNPC-228ENST00000557033 PI4K2BG5E9Z4 385 aa10.85□□□□□ -0.67
HNRNPC-228ENST00000557033 LAD1O00515 517 aa10.85□□□□□ -0.67
HNRNPC-228ENST00000557033 PER2O15055 1255 aa10.85□□□□□ -0.67
HNRNPC-228ENST00000557033 TBX10O75333 385 aa10.85□□□□□ -0.67
HNRNPC-228ENST00000557033 MED24O75448 989 aa10.85□□□□□ -0.67
HNRNPC-228ENST00000557033 CSPG5O95196 566 aa10.85□□□□□ -0.67
HNRNPC-228ENST00000557033 F11P03951 625 aa10.85□□□□□ -0.67
HNRNPC-228ENST00000557033 SRGAP2BP0DMP2 458 aa10.85□□□□□ -0.67
HNRNPC-228ENST00000557033 GIT2Q14161 759 aa10.85□□□□□ -0.67
HNRNPC-228ENST00000557033 UBXN11Q5T124 520 aa10.85□□□□□ -0.67
HNRNPC-228ENST00000557033 HAUS3Q68CZ6 603 aa10.85□□□□□ -0.67
HNRNPC-228ENST00000557033 NOTUMQ6P988 496 aa10.85□□□□□ -0.67
HNRNPC-228ENST00000557033 GK5Q6ZS86 529 aa10.85□□□□□ -0.67
HNRNPC-228ENST00000557033 REC114Q7Z4M0 266 aa10.85□□□□□ -0.67
HNRNPC-228ENST00000557033 LSRQ86X29 649 aaPredicted RBP10.85□□□□□ -0.67
HNRNPC-228ENST00000557033 ADHFE1Q8IWW8 467 aa10.85□□□□□ -0.67
HNRNPC-228ENST00000557033 PGBD3Q8N328 593 aa10.85□□□□□ -0.67
HNRNPC-228ENST00000557033 MRPL43Q8N983 215 aaKnown RBP10.85□□□□□ -0.67
HNRNPC-228ENST00000557033 URGCPQ8TCY9 931 aa10.85□□□□□ -0.67
HNRNPC-228ENST00000557033 LPPQ93052 612 aa10.85□□□□□ -0.67
HNRNPC-228ENST00000557033 TMEM169Q96HH4 297 aa10.85□□□□□ -0.67
HNRNPC-228ENST00000557033 POP1Q99575 1024 aaKnown RBP10.85□□□□□ -0.67
HNRNPC-228ENST00000557033 RAB34Q9BZG1 259 aa10.85□□□□□ -0.67
HNRNPC-228ENST00000557033 NRDE2Q9H7Z3 1164 aa10.85□□□□□ -0.67
HNRNPC-228ENST00000557033 CD320Q9NPF0 282 aa10.85□□□□□ -0.67
HNRNPC-228ENST00000557033 TBC1D13Q9NVG8 400 aa10.85□□□□□ -0.67
HNRNPC-228ENST00000557033 GPN3Q9UHW5 284 aaPredicted RBP10.85□□□□□ -0.67
HNRNPC-228ENST00000557033 MUC3AQ02505 3323 aa10.84□□□□□ -0.67
HNRNPC-228ENST00000557033 INO80B-WBP1J3KQ70 363 aa10.84□□□□□ -0.67
HNRNPC-228ENST00000557033 EFSO43281 561 aa10.84□□□□□ -0.67
HNRNPC-228ENST00000557033 GDF9O60383 454 aa10.84□□□□□ -0.67
HNRNPC-228ENST00000557033 TSPAN1O60635 241 aa10.84□□□□□ -0.67
HNRNPC-228ENST00000557033 ALDH2P05091 517 aa10.84□□□□□ -0.67
HNRNPC-228ENST00000557033 GALTP07902 379 aa10.84□□□□□ -0.67
HNRNPC-228ENST00000557033 BMP2P12643 396 aa10.84□□□□□ -0.67
HNRNPC-228ENST00000557033 ITGA4P13612 1032 aa10.84□□□□□ -0.67
HNRNPC-228ENST00000557033 ALADP13716 330 aa10.84□□□□□ -0.67
HNRNPC-228ENST00000557033 GLRA2P23416 452 aa10.84□□□□□ -0.67
HNRNPC-228ENST00000557033 TOB1P50616 345 aaPredicted RBP10.84□□□□□ -0.67
HNRNPC-228ENST00000557033 RNASELQ05823 741 aaKnown RBP10.84□□□□□ -0.67
HNRNPC-228ENST00000557033 ZP2Q05996 745 aa10.84□□□□□ -0.67
HNRNPC-228ENST00000557033 MBTD1Q05BQ5 628 aa10.84□□□□□ -0.67
HNRNPC-228ENST00000557033 CAPSQ13938 189 aa10.84□□□□□ -0.67
HNRNPC-228ENST00000557033 KCNC3Q14003 757 aa10.84□□□□□ -0.67
HNRNPC-228ENST00000557033 SMC1AQ14683 1233 aaKnown RBP10.84□□□□□ -0.67
HNRNPC-228ENST00000557033 HACE1Q8IYU2 909 aa10.84□□□□□ -0.67
HNRNPC-228ENST00000557033 SYNPOQ8N3V7 929 aa10.84□□□□□ -0.67
HNRNPC-228ENST00000557033 ASAP3Q8TDY4 903 aa10.84□□□□□ -0.67
HNRNPC-228ENST00000557033 TMX3Q96JJ7 454 aa10.84□□□□□ -0.67
HNRNPC-228ENST00000557033 HHIPQ96QV1 700 aa10.84□□□□□ -0.67
HNRNPC-228ENST00000557033 TMEM175Q9BSA9 504 aa10.84□□□□□ -0.67
HNRNPC-228ENST00000557033 IER2Q9BTL4 223 aa10.84□□□□□ -0.67
HNRNPC-228ENST00000557033 CSRNP2Q9H175 543 aa10.84□□□□□ -0.67
HNRNPC-228ENST00000557033 EPHX3Q9H6B9 360 aa10.84□□□□□ -0.67
HNRNPC-228ENST00000557033 RSAD1Q9HA92 442 aa10.84□□□□□ -0.67
HNRNPC-228ENST00000557033 ENTPD7Q9NQZ7 604 aa10.84□□□□□ -0.67
HNRNPC-228ENST00000557033 LRWD1Q9UFC0 647 aa10.84□□□□□ -0.67
HNRNPC-228ENST00000557033 CYP8B1Q9UNU6 501 aa10.84□□□□□ -0.67
HNRNPC-228ENST00000557033 PCDHGC5Q9Y5F6 944 aa10.84□□□□□ -0.67
HNRNPC-228ENST00000557033 TTC28Q96AY4 2481 aa10.83□□□□□ -0.68
HNRNPC-228ENST00000557033 MYO7AQ13402 2215 aa10.83□□□□□ -0.68
HNRNPC-228ENST00000557033 A0A087WWV3 80 aa10.83□□□□□ -0.68
HNRNPC-228ENST00000557033 A0A1B0GUA9 196 aa10.83□□□□□ -0.68
HNRNPC-228ENST00000557033 ARHGEF35A5YM69 484 aa10.83□□□□□ -0.68
HNRNPC-228ENST00000557033 MEIS3P2A8K0S8 358 aa10.83□□□□□ -0.68
HNRNPC-228ENST00000557033 NT5C1B-RDH14C9J2C7 533 aa10.83□□□□□ -0.68
HNRNPC-228ENST00000557033 INPPL1O15357 1258 aa10.83□□□□□ -0.68
HNRNPC-228ENST00000557033 TPD52L2O43399 206 aaKnown RBP10.83□□□□□ -0.68
HNRNPC-228ENST00000557033 USO1O60763 962 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms