RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 EAF2Q96CJ1 260 aaPredicted RBP1.28□□□□□ -2.2
COPB1-212ENST00000534771 MARK4Q96L34 752 aa1.28□□□□□ -2.2
COPB1-212ENST00000534771 GPR101Q96P66 508 aaPredicted RBP1.28□□□□□ -2.2
COPB1-212ENST00000534771 MYOCQ99972 504 aa1.28□□□□□ -2.2
COPB1-212ENST00000534771 PRSS22Q9GZN4 317 aa1.28□□□□□ -2.2
COPB1-212ENST00000534771 KCTD10Q9H3F6 313 aa1.28□□□□□ -2.2
COPB1-212ENST00000534771 PRDM12Q9H4Q4 367 aa1.28□□□□□ -2.2
COPB1-212ENST00000534771 SPTLC3Q9NUV7 552 aa1.28□□□□□ -2.2
COPB1-212ENST00000534771 MAGEC2Q9UBF1 373 aaPredicted RBP1.28□□□□□ -2.2
COPB1-212ENST00000534771 SLC23A1Q9UHI7 598 aa1.28□□□□□ -2.2
COPB1-212ENST00000534771 NR2E3Q9Y5X4 410 aa1.28□□□□□ -2.2
COPB1-212ENST00000534771 ARHGEF17Q96PE2 2063 aaPredicted RBP1.28□□□□□ -2.2
COPB1-212ENST00000534771 CYP2D7A0A087X1C5 515 aa1.27□□□□□ -2.21
COPB1-212ENST00000534771 TCRBV7S2A1N4TA0A589 114 aa1.27□□□□□ -2.21
COPB1-212ENST00000534771 WDR27A2RRH5 827 aa1.27□□□□□ -2.21
COPB1-212ENST00000534771 CDHR4A6H8M9 788 aa1.27□□□□□ -2.21
COPB1-212ENST00000534771 KCNU1A8MYU2 1149 aa1.27□□□□□ -2.21
COPB1-212ENST00000534771 VWC2LB2RUY7 222 aa1.27□□□□□ -2.21
COPB1-212ENST00000534771 PRRT4C9JH25 899 aa1.27□□□□□ -2.21
COPB1-212ENST00000534771 SOCS2O14508 198 aa1.27□□□□□ -2.21
COPB1-212ENST00000534771 PPP1R12AO14974 1030 aaPredicted RBP1.27□□□□□ -2.21
COPB1-212ENST00000534771 KDM1AO60341 852 aa1.27□□□□□ -2.21
COPB1-212ENST00000534771 KPNA6O60684 536 aa1.27□□□□□ -2.21
COPB1-212ENST00000534771 DNAJB5O75953 348 aa1.27□□□□□ -2.21
COPB1-212ENST00000534771 NR2F6P10588 404 aa1.27□□□□□ -2.21
COPB1-212ENST00000534771 PPP3CBP16298 524 aa1.27□□□□□ -2.21
COPB1-212ENST00000534771 KCNA2P16389 499 aa1.27□□□□□ -2.21
COPB1-212ENST00000534771 POU3F2P20265 443 aaPredicted RBP1.27□□□□□ -2.21
COPB1-212ENST00000534771 SFPQP23246 707 aaKnown RBP eCLIP1.27□□□□□ -2.21
COPB1-212ENST00000534771 GUCY1A2P33402 732 aa1.27□□□□□ -2.21
COPB1-212ENST00000534771 CCT8P50990 548 aa1.27□□□□□ -2.21
COPB1-212ENST00000534771 HNRNPMP52272 730 aaKnown RBP eCLIP1.27□□□□□ -2.21
COPB1-212ENST00000534771 CREMQ03060 361 aa1.27□□□□□ -2.21
COPB1-212ENST00000534771 ZNF844Q08AG5 666 aa1.27□□□□□ -2.21
COPB1-212ENST00000534771 PABPC4Q13310 644 aaKnown RBP eCLIP1.27□□□□□ -2.21
COPB1-212ENST00000534771 HLXQ14774 488 aaPredicted RBP1.27□□□□□ -2.21
COPB1-212ENST00000534771 LRRC41Q15345 812 aa1.27□□□□□ -2.21
COPB1-212ENST00000534771 TWIST1Q15672 202 aa1.27□□□□□ -2.21
COPB1-212ENST00000534771 FSCN1Q16658 493 aaKnown RBP1.27□□□□□ -2.21
COPB1-212ENST00000534771 SOGA3Q5TF21 947 aa1.27□□□□□ -2.21
COPB1-212ENST00000534771 BROXQ5VW32 411 aa1.27□□□□□ -2.21
COPB1-212ENST00000534771 IRF2BP2Q7Z5L9 587 aa1.27□□□□□ -2.21
COPB1-212ENST00000534771 MRPL10Q7Z7H8 261 aaKnown RBP1.27□□□□□ -2.21
COPB1-212ENST00000534771 C11orf74Q86VG3 221 aa1.27□□□□□ -2.21
COPB1-212ENST00000534771 RASSF3Q86WH2 238 aa1.27□□□□□ -2.21
COPB1-212ENST00000534771 KRT78Q8N1N4 520 aa1.27□□□□□ -2.21
COPB1-212ENST00000534771 B3GALNT2Q8NCR0 500 aa1.27□□□□□ -2.21
COPB1-212ENST00000534771 SMC1BQ8NDV3 1235 aa1.27□□□□□ -2.21
COPB1-212ENST00000534771 PRSS3P2Q8NHM4 247 aa1.27□□□□□ -2.21
COPB1-212ENST00000534771 SNX19Q92543 992 aa1.27□□□□□ -2.21
COPB1-212ENST00000534771 CYFIP2Q96F07 1278 aa1.27□□□□□ -2.21
COPB1-212ENST00000534771 RAX2Q96IS3 184 aa1.27□□□□□ -2.21
COPB1-212ENST00000534771 ORAI2Q96SN7 254 aa1.27□□□□□ -2.21
COPB1-212ENST00000534771 TANGO6Q9C0B7 1094 aa1.27□□□□□ -2.21
COPB1-212ENST00000534771 MS4A5Q9H3V2 200 aa1.27□□□□□ -2.21
COPB1-212ENST00000534771 LANCL2Q9NS86 450 aa1.27□□□□□ -2.21
COPB1-212ENST00000534771 RBM12Q9NTZ6 932 aaKnown RBP1.27□□□□□ -2.21
COPB1-212ENST00000534771 SERTAD4Q9NUC0 356 aa1.27□□□□□ -2.21
COPB1-212ENST00000534771 SH3BP4Q9P0V3 963 aa1.27□□□□□ -2.21
COPB1-212ENST00000534771 SERGEFQ9UGK8 458 aa1.27□□□□□ -2.21
COPB1-212ENST00000534771 AJAP1Q9UKB5 411 aaPredicted RBP1.27□□□□□ -2.21
COPB1-212ENST00000534771 EDARQ9UNE0 448 aa1.27□□□□□ -2.21
COPB1-212ENST00000534771 AFG3L2Q9Y4W6 797 aa1.27□□□□□ -2.21
COPB1-212ENST00000534771 ACTL7AQ9Y615 435 aa1.27□□□□□ -2.21
COPB1-212ENST00000534771 ADGRA2Q96PE1 1338 aa1.26□□□□□ -2.21
COPB1-212ENST00000534771 SMIM35A0A1B0GVV1 85 aa1.26□□□□□ -2.21
COPB1-212ENST00000534771 TISP43B9A030 160 aa1.26□□□□□ -2.21
COPB1-212ENST00000534771 PRSS44E7EML9 344 aa1.26□□□□□ -2.21
COPB1-212ENST00000534771 F5H697 171 aa1.26□□□□□ -2.21
COPB1-212ENST00000534771 MYO1FO00160 1098 aa1.26□□□□□ -2.21
COPB1-212ENST00000534771 KIAA0391O15091 583 aaKnown RBP1.26□□□□□ -2.21
COPB1-212ENST00000534771 URI1O94763 535 aaPredicted RBP1.26□□□□□ -2.21
COPB1-212ENST00000534771 ENDOD1O94919 500 aa1.26□□□□□ -2.21
COPB1-212ENST00000534771 FKBP9O95302 570 aa1.26□□□□□ -2.21
COPB1-212ENST00000534771 FGBP02675 491 aa1.26□□□□□ -2.21
COPB1-212ENST00000534771 NHLRC4P0CG21 123 aaPredicted RBP1.26□□□□□ -2.21
COPB1-212ENST00000534771 FCER1AP12319 257 aa1.26□□□□□ -2.21
COPB1-212ENST00000534771 ZFXP17010 805 aaPredicted RBP1.26□□□□□ -2.21
COPB1-212ENST00000534771 NDUFB7P17568 137 aa1.26□□□□□ -2.21
COPB1-212ENST00000534771 FPR1P21462 350 aa1.26□□□□□ -2.21
COPB1-212ENST00000534771 DRD4P21917 467 aa1.26□□□□□ -2.21
COPB1-212ENST00000534771 SCP2P22307 547 aa1.26□□□□□ -2.21
COPB1-212ENST00000534771 LSSP48449 732 aa1.26□□□□□ -2.21
COPB1-212ENST00000534771 KCNJ5P48544 419 aa1.26□□□□□ -2.21
COPB1-212ENST00000534771 ANXA11P50995 505 aaKnown RBP1.26□□□□□ -2.21
COPB1-212ENST00000534771 LINC00205P59089 165 aa1.26□□□□□ -2.21
COPB1-212ENST00000534771 IL2P60568 153 aa1.26□□□□□ -2.21
COPB1-212ENST00000534771 SLFN5Q08AF3 891 aa1.26□□□□□ -2.21
COPB1-212ENST00000534771 BMPR2Q13873 1038 aa1.26□□□□□ -2.21
COPB1-212ENST00000534771 DAZAP2Q15038 168 aaPredicted RBP1.26□□□□□ -2.21
COPB1-212ENST00000534771 PDCD1Q15116 288 aa1.26□□□□□ -2.21
COPB1-212ENST00000534771 PCBP1Q15365 356 aaKnown RBP eCLIP1.26□□□□□ -2.21
COPB1-212ENST00000534771 ATP2B3Q16720 1220 aa1.26□□□□□ -2.21
COPB1-212ENST00000534771 PREPLQ4J6C6 727 aaPredicted RBP1.26□□□□□ -2.21
COPB1-212ENST00000534771 MUM1L1Q5H9M0 696 aa1.26□□□□□ -2.21
COPB1-212ENST00000534771 UTP14CQ5TAP6 766 aaKnown RBP1.26□□□□□ -2.21
COPB1-212ENST00000534771 MIS18BP1Q6P0N0 1132 aa1.26□□□□□ -2.21
COPB1-212ENST00000534771 CATSPERGQ6ZRH7 1159 aa1.26□□□□□ -2.21
COPB1-212ENST00000534771 FKBP9P1Q75LS8 142 aa1.26□□□□□ -2.21
COPB1-212ENST00000534771 CNGA4Q8IV77 575 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms