RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 PARD3BQ8TEW8 1205 aa15.13■□□□□ 0.01
VPS11-205ENST00000534551 PIK3R5Q8WYR1 880 aa15.13■□□□□ 0.01
VPS11-205ENST00000534551 PPP2R3CQ969Q6 453 aa15.13■□□□□ 0.01
VPS11-205ENST00000534551 MED15Q96RN5 788 aa15.13■□□□□ 0.01
VPS11-205ENST00000534551 TSPAN18Q96SJ8 248 aa15.13■□□□□ 0.01
VPS11-205ENST00000534551 TSG101Q99816 390 aa15.13■□□□□ 0.01
VPS11-205ENST00000534551 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.13■□□□□ 0.01
VPS11-205ENST00000534551 PCDHB8Q9UN66 801 aa15.13■□□□□ 0.01
VPS11-205ENST00000534551 PTPRDP23468 1912 aa15.12■□□□□ 0.01
VPS11-205ENST00000534551 M0QZQ0 153 aa15.12■□□□□ 0.01
VPS11-205ENST00000534551 HCRTO43612 131 aa15.12■□□□□ 0.01
VPS11-205ENST00000534551 TNNC2P02585 160 aa15.12■□□□□ 0.01
VPS11-205ENST00000534551 OR4Q2P0C623 313 aa15.12■□□□□ 0.01
VPS11-205ENST00000534551 SPATA31D3P0C874 917 aa15.12■□□□□ 0.01
VPS11-205ENST00000534551 TAF6P49848 677 aa15.12■□□□□ 0.01
VPS11-205ENST00000534551 CLCN4P51793 760 aa15.12■□□□□ 0.01
VPS11-205ENST00000534551 ADAM15Q13444 863 aa15.12■□□□□ 0.01
VPS11-205ENST00000534551 STIM1Q13586 685 aa15.12■□□□□ 0.01
VPS11-205ENST00000534551 MYBPC2Q14324 1141 aa15.12■□□□□ 0.01
VPS11-205ENST00000534551 SURF1Q15526 300 aa15.12■□□□□ 0.01
VPS11-205ENST00000534551 RBM43Q6ZSC3 357 aaKnown RBP15.12■□□□□ 0.01
VPS11-205ENST00000534551 SPATA31D4Q6ZUB0 917 aa15.12■□□□□ 0.01
VPS11-205ENST00000534551 TRAPPC11Q7Z392 1133 aa15.12■□□□□ 0.01
VPS11-205ENST00000534551 PALB2Q86YC2 1186 aa15.12■□□□□ 0.01
VPS11-205ENST00000534551 C12orf76Q8N812 135 aaPredicted RBP15.12■□□□□ 0.01
VPS11-205ENST00000534551 SLC22A17Q8WUG5 538 aa15.12■□□□□ 0.01
VPS11-205ENST00000534551 TMEM174Q8WUU8 243 aa15.12■□□□□ 0.01
VPS11-205ENST00000534551 HLA-CQ95604 372 aa15.12■□□□□ 0.01
VPS11-205ENST00000534551 BORCS6Q96GS4 357 aa15.12■□□□□ 0.01
VPS11-205ENST00000534551 DHTKD1Q96HY7 919 aaPredicted RBP15.12■□□□□ 0.01
VPS11-205ENST00000534551 SENP8Q96LD8 212 aa15.12■□□□□ 0.01
VPS11-205ENST00000534551 ZNF560Q96MR9 790 aa15.12■□□□□ 0.01
VPS11-205ENST00000534551 TMEM209Q96SK2 561 aa15.12■□□□□ 0.01
VPS11-205ENST00000534551 CLSTN3Q9BQT9 956 aa15.12■□□□□ 0.01
VPS11-205ENST00000534551 EMILIN2Q9BXX0 1053 aa15.12■□□□□ 0.01
VPS11-205ENST00000534551 RXFP1Q9HBX9 757 aa15.12■□□□□ 0.01
VPS11-205ENST00000534551 MTRRQ9UBK8 725 aa15.12■□□□□ 0.01
VPS11-205ENST00000534551 ITGA11Q9UKX5 1188 aa15.12■□□□□ 0.01
VPS11-205ENST00000534551 FRMD4BQ9Y2L6 1034 aa15.12■□□□□ 0.01
VPS11-205ENST00000534551 SYN3O14994 580 aa15.11■□□□□ 0.01
VPS11-205ENST00000534551 TRAPPC3O43617 180 aa15.11■□□□□ 0.01
VPS11-205ENST00000534551 MBD3O95983 291 aa15.11■□□□□ 0.01
VPS11-205ENST00000534551 ADH1AP07327 375 aa15.11■□□□□ 0.01
VPS11-205ENST00000534551 EPB41P11171 864 aaKnown RBP15.11■□□□□ 0.01
VPS11-205ENST00000534551 RPL13P26373 211 aaKnown RBP15.11■□□□□ 0.01
VPS11-205ENST00000534551 KLRC2P26717 231 aa15.11■□□□□ 0.01
VPS11-205ENST00000534551 VAMP7P51809 220 aa15.11■□□□□ 0.01
VPS11-205ENST00000534551 ARPP19P56211 112 aa15.11■□□□□ 0.01
VPS11-205ENST00000534551 LRRC63Q05C16 580 aa15.11■□□□□ 0.01
VPS11-205ENST00000534551 PPP3CAQ08209 521 aa15.11■□□□□ 0.01
VPS11-205ENST00000534551 BIRC3Q13489 604 aa15.11■□□□□ 0.01
VPS11-205ENST00000534551 BMS1Q14692 1282 aaKnown RBP15.11■□□□□ 0.01
VPS11-205ENST00000534551 CCDC142Q17RM4 750 aa15.11■□□□□ 0.01
VPS11-205ENST00000534551 DUOXA2Q1HG44 320 aa15.11■□□□□ 0.01
VPS11-205ENST00000534551 SV2CQ496J9 727 aa15.11■□□□□ 0.01
VPS11-205ENST00000534551 DCAF17Q5H9S7 520 aaPredicted RBP15.11■□□□□ 0.01
VPS11-205ENST00000534551 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.11■□□□□ 0.01
VPS11-205ENST00000534551 CACTINQ8WUQ7 758 aaKnown RBP15.11■□□□□ 0.01
VPS11-205ENST00000534551 CDCA3Q99618 268 aaPredicted RBP15.11■□□□□ 0.01
VPS11-205ENST00000534551 MAN1C1Q9NR34 630 aa15.11■□□□□ 0.01
VPS11-205ENST00000534551 CDY1Q9Y6F8 540 aa15.11■□□□□ 0.01
VPS11-205ENST00000534551 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.1■□□□□ 0.01
VPS11-205ENST00000534551 CYB561D2O14569 222 aa15.1■□□□□ 0.01
VPS11-205ENST00000534551 CETN3O15182 167 aa15.1■□□□□ 0.01
VPS11-205ENST00000534551 TGM5O43548 720 aa15.1■□□□□ 0.01
VPS11-205ENST00000534551 LRRN2O75325 713 aa15.1■□□□□ 0.01
VPS11-205ENST00000534551 VNN1O95497 513 aa15.1■□□□□ 0.01
VPS11-205ENST00000534551 CST3P01034 146 aaPredicted RBP15.1■□□□□ 0.01
VPS11-205ENST00000534551 WEE2P0C1S8 567 aa15.1■□□□□ 0.01
VPS11-205ENST00000534551 ODC1P11926 461 aa15.1■□□□□ 0.01
VPS11-205ENST00000534551 PSMC2P35998 433 aaKnown RBP15.1■□□□□ 0.01
VPS11-205ENST00000534551 GCLMP48507 274 aa15.1■□□□□ 0.01
VPS11-205ENST00000534551 NLRP12P59046 1061 aa15.1■□□□□ 0.01
VPS11-205ENST00000534551 MYL6P60660 151 aa15.1■□□□□ 0.01
VPS11-205ENST00000534551 CLDN10P78369 228 aa15.1■□□□□ 0.01
VPS11-205ENST00000534551 ROR1Q01973 937 aa15.1■□□□□ 0.01
VPS11-205ENST00000534551 CTXN3Q4LDR2 81 aa15.1■□□□□ 0.01
VPS11-205ENST00000534551 CCDC183Q5T5S1 534 aa15.1■□□□□ 0.01
VPS11-205ENST00000534551 WSCD1Q658N2 575 aa15.1■□□□□ 0.01
VPS11-205ENST00000534551 CAVIN1Q6NZI2 390 aaKnown RBP15.1■□□□□ 0.01
VPS11-205ENST00000534551 SYCE2Q6PIF2 218 aa15.1■□□□□ 0.01
VPS11-205ENST00000534551 OSTM1Q86WC4 334 aa15.1■□□□□ 0.01
VPS11-205ENST00000534551 OR10T2Q8NGX3 314 aa15.1■□□□□ 0.01
VPS11-205ENST00000534551 TMC2Q8TDI7 906 aa15.1■□□□□ 0.01
VPS11-205ENST00000534551 MSLNLQ96KJ4 702 aa15.1■□□□□ 0.01
VPS11-205ENST00000534551 RTP3Q9BQQ7 232 aa15.1■□□□□ 0.01
VPS11-205ENST00000534551 STK39Q9UEW8 545 aa15.1■□□□□ 0.01
VPS11-205ENST00000534551 FBXL5Q9UKA1 691 aa15.1■□□□□ 0.01
VPS11-205ENST00000534551 L1RE1Q9UN81 338 aa15.1■□□□□ 0.01
VPS11-205ENST00000534551 POLIQ9UNA4 740 aa15.1■□□□□ 0.01
VPS11-205ENST00000534551 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.1■□□□□ 0.01
VPS11-205ENST00000534551 SNX9Q9Y5X1 595 aa15.1■□□□□ 0.01
VPS11-205ENST00000534551 NOTCH4Q99466 2003 aa15.09■□□□□ 0.01
VPS11-205ENST00000534551 WDR27A2RRH5 827 aa15.09■□□□□ 0.01
VPS11-205ENST00000534551 GRXCR2A6NFK2 248 aa15.09■□□□□ 0.01
VPS11-205ENST00000534551 KPNA7A9QM74 516 aa15.09■□□□□ 0.01
VPS11-205ENST00000534551 MAPK13O15264 365 aa15.09■□□□□ 0.01
VPS11-205ENST00000534551 TBC1D4O60343 1298 aa15.09■□□□□ 0.01
VPS11-205ENST00000534551 CLSTN1O94985 981 aa15.09■□□□□ 0.01
VPS11-205ENST00000534551 GLUD1P00367 558 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms