RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 ERVK-5Q9HDB9 667 aa12.3□□□□□ -0.44
USP35-207ENST00000530546 CNOT8Q9UFF9 292 aaKnown RBP12.3□□□□□ -0.44
USP35-207ENST00000530546 WDR90Q96KV7 1748 aa12.3□□□□□ -0.44
USP35-207ENST00000530546 CCDC188H7C350 402 aa12.3□□□□□ -0.44
USP35-207ENST00000530546 CXCL11O14625 94 aa12.3□□□□□ -0.44
USP35-207ENST00000530546 DAPK3O43293 454 aa12.3□□□□□ -0.44
USP35-207ENST00000530546 VNN1O95497 513 aa12.3□□□□□ -0.44
USP35-207ENST00000530546 C4BPAP04003 597 aaKnown RBP12.3□□□□□ -0.44
USP35-207ENST00000530546 CYP2C8P10632 490 aa12.3□□□□□ -0.44
USP35-207ENST00000530546 GZMAP12544 262 aa12.3□□□□□ -0.44
USP35-207ENST00000530546 TNFSF9P41273 254 aa12.3□□□□□ -0.44
USP35-207ENST00000530546 ZNF268Q14587 947 aaPredicted RBP12.3□□□□□ -0.44
USP35-207ENST00000530546 SLC5A9Q2M3M2 681 aa12.3□□□□□ -0.44
USP35-207ENST00000530546 SLFN12LQ6IEE8 588 aa12.3□□□□□ -0.44
USP35-207ENST00000530546 DDX1Q92499 740 aaKnown RBP12.3□□□□□ -0.44
USP35-207ENST00000530546 RAPGEF5Q92565 580 aa12.3□□□□□ -0.44
USP35-207ENST00000530546 FGD4Q96M96 766 aa12.3□□□□□ -0.44
USP35-207ENST00000530546 SPATA33Q96N06 139 aa12.3□□□□□ -0.44
USP35-207ENST00000530546 CNOT10Q9H9A5 744 aaKnown RBP12.3□□□□□ -0.44
USP35-207ENST00000530546 PDGFCQ9NRA1 345 aa12.3□□□□□ -0.44
USP35-207ENST00000530546 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.3□□□□□ -0.44
USP35-207ENST00000530546 UMODL1Q5DID0 1318 aa12.3□□□□□ -0.44
USP35-207ENST00000530546 ARID2Q68CP9 1835 aa12.3□□□□□ -0.44
USP35-207ENST00000530546 CLDN3O15551 220 aa12.3□□□□□ -0.44
USP35-207ENST00000530546 ADCY3O60266 1144 aa12.3□□□□□ -0.44
USP35-207ENST00000530546 AP1G2O75843 785 aa12.3□□□□□ -0.44
USP35-207ENST00000530546 NEFHP12036 1026 aa12.3□□□□□ -0.44
USP35-207ENST00000530546 RAB27AP51159 221 aa12.3□□□□□ -0.44
USP35-207ENST00000530546 BLMHQ13867 455 aa12.3□□□□□ -0.44
USP35-207ENST00000530546 ITIH4Q14624 930 aa12.3□□□□□ -0.44
USP35-207ENST00000530546 TMEM132AQ24JP5 1023 aa12.3□□□□□ -0.44
USP35-207ENST00000530546 C15orf39Q6ZRI6 1047 aa12.3□□□□□ -0.44
USP35-207ENST00000530546 UBL4BQ8N7F7 174 aa12.3□□□□□ -0.44
USP35-207ENST00000530546 RNF149Q8NC42 400 aa12.3□□□□□ -0.44
USP35-207ENST00000530546 CCDC197Q8NCU1 140 aa12.3□□□□□ -0.44
USP35-207ENST00000530546 CENPTQ96BT3 561 aa12.3□□□□□ -0.44
USP35-207ENST00000530546 GPR20Q99678 358 aa12.3□□□□□ -0.44
USP35-207ENST00000530546 CARD9Q9H257 536 aa12.3□□□□□ -0.44
USP35-207ENST00000530546 NEUROG2Q9H2A3 272 aa12.3□□□□□ -0.44
USP35-207ENST00000530546 APOBEC3GQ9HC16 384 aaKnown RBP12.3□□□□□ -0.44
USP35-207ENST00000530546 PCDHB4Q9Y5E5 795 aa12.3□□□□□ -0.44
USP35-207ENST00000530546 A0A0B4J269 797 aa12.29□□□□□ -0.44
USP35-207ENST00000530546 SLC25A27O95847 323 aa12.29□□□□□ -0.44
USP35-207ENST00000530546 DRD4P21917 467 aa12.29□□□□□ -0.44
USP35-207ENST00000530546 EPHX2P34913 555 aa12.29□□□□□ -0.44
USP35-207ENST00000530546 OSTNP61366 133 aa12.29□□□□□ -0.44
USP35-207ENST00000530546 IGBP1P78318 339 aa12.29□□□□□ -0.44
USP35-207ENST00000530546 GCNT1Q02742 428 aa12.29□□□□□ -0.44
USP35-207ENST00000530546 GJC2Q5T442 439 aaPredicted RBP12.29□□□□□ -0.44
USP35-207ENST00000530546 ACAD10Q6JQN1 1059 aa12.29□□□□□ -0.44
USP35-207ENST00000530546 RHPN2Q8IUC4 686 aa12.29□□□□□ -0.44
USP35-207ENST00000530546 APLFQ8IW19 511 aaPredicted RBP12.29□□□□□ -0.44
USP35-207ENST00000530546 NLRP4Q96MN2 994 aa12.29□□□□□ -0.44
USP35-207ENST00000530546 ZNF570Q96NI8 536 aa12.29□□□□□ -0.44
USP35-207ENST00000530546 PPP1R16BQ96T49 567 aa12.29□□□□□ -0.44
USP35-207ENST00000530546 ZSWIM1Q9BR11 485 aa12.29□□□□□ -0.44
USP35-207ENST00000530546 H0YGN5 161 aa12.29□□□□□ -0.44
USP35-207ENST00000530546 MAFO75444 373 aaPredicted RBP12.29□□□□□ -0.44
USP35-207ENST00000530546 CFHP08603 1231 aa12.29□□□□□ -0.44
USP35-207ENST00000530546 TGFB3P10600 412 aa12.29□□□□□ -0.44
USP35-207ENST00000530546 OSBPP22059 807 aa12.29□□□□□ -0.44
USP35-207ENST00000530546 CCND1P24385 295 aa12.29□□□□□ -0.44
USP35-207ENST00000530546 CUL1Q13616 776 aa12.29□□□□□ -0.44
USP35-207ENST00000530546 CLEC16AQ2KHT3 1053 aa12.29□□□□□ -0.44
USP35-207ENST00000530546 C11orf63Q6NUN7 778 aa12.29□□□□□ -0.44
USP35-207ENST00000530546 TMEM270Q6UE05 265 aa12.29□□□□□ -0.44
USP35-207ENST00000530546 MFN1Q8IWA4 741 aa12.29□□□□□ -0.44
USP35-207ENST00000530546 CHMP6Q96FZ7 201 aa12.29□□□□□ -0.44
USP35-207ENST00000530546 TRIM7Q9C029 511 aa12.29□□□□□ -0.44
USP35-207ENST00000530546 MAF1Q9H063 256 aa12.29□□□□□ -0.44
USP35-207ENST00000530546 SLC5A4Q9NY91 659 aa12.29□□□□□ -0.44
USP35-207ENST00000530546 NFS1Q9Y697 457 aa12.29□□□□□ -0.44
USP35-207ENST00000530546 STYXL1Q9Y6J8 313 aa12.29□□□□□ -0.44
USP35-207ENST00000530546 GOLGA6L10A0A0M3HER8 536 aa12.28□□□□□ -0.44
USP35-207ENST00000530546 ENO4A6NNW6 628 aa12.28□□□□□ -0.44
USP35-207ENST00000530546 GRIN3BO60391 1043 aa12.28□□□□□ -0.44
USP35-207ENST00000530546 ATP2C2O75185 946 aa12.28□□□□□ -0.44
USP35-207ENST00000530546 TXNP10599 105 aaKnown RBP12.28□□□□□ -0.44
USP35-207ENST00000530546 ABCD1P33897 745 aa12.28□□□□□ -0.44
USP35-207ENST00000530546 LAMTOR4Q0VGL1 99 aa12.28□□□□□ -0.44
USP35-207ENST00000530546 PPIL2Q13356 520 aa12.28□□□□□ -0.44
USP35-207ENST00000530546 MTMR3Q13615 1198 aa12.28□□□□□ -0.44
USP35-207ENST00000530546 ODF2Q5BJF6 829 aa12.28□□□□□ -0.44
USP35-207ENST00000530546 CELF3Q5SZQ8 465 aaKnown RBP12.28□□□□□ -0.44
USP35-207ENST00000530546 DPY19L2Q6NUT2 758 aa12.28□□□□□ -0.44
USP35-207ENST00000530546 SLC30A9Q6PML9 568 aa12.28□□□□□ -0.44
USP35-207ENST00000530546 MPHOSPH6Q99547 160 aaKnown RBP12.28□□□□□ -0.44
USP35-207ENST00000530546 GTF3C4Q9UKN8 822 aa12.28□□□□□ -0.44
USP35-207ENST00000530546 LDHAP00338 332 aaKnown RBP12.28□□□□□ -0.44
USP35-207ENST00000530546 PYGMP11217 842 aa12.28□□□□□ -0.44
USP35-207ENST00000530546 HSD17B3P37058 310 aa12.28□□□□□ -0.44
USP35-207ENST00000530546 MCCD1P59942 119 aaPredicted RBP12.28□□□□□ -0.44
USP35-207ENST00000530546 ZNF844Q08AG5 666 aa12.28□□□□□ -0.44
USP35-207ENST00000530546 CCDC38Q502W7 563 aa12.28□□□□□ -0.44
USP35-207ENST00000530546 ENOSF1Q7L5Y1 443 aa12.28□□□□□ -0.44
USP35-207ENST00000530546 CGRRF1Q99675 332 aa12.28□□□□□ -0.44
USP35-207ENST00000530546 SYT17Q9BSW7 474 aa12.28□□□□□ -0.44
USP35-207ENST00000530546 SLITRK6Q9H5Y7 841 aa12.28□□□□□ -0.44
USP35-207ENST00000530546 ANAPC7Q9UJX3 599 aa12.28□□□□□ -0.44
USP35-207ENST00000530546 NUB1Q9Y5A7 615 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms