RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 HS6ST2Q96MM7 605 aa8□□□□□ -1.13
HDAC3-216ENST00000523088 NUDCD1Q96RS6 583 aa8□□□□□ -1.13
HDAC3-216ENST00000523088 MNTQ99583 582 aa8□□□□□ -1.13
HDAC3-216ENST00000523088 TTC1Q99614 292 aa8□□□□□ -1.13
HDAC3-216ENST00000523088 GPATCH1Q9BRR8 931 aaKnown RBP8□□□□□ -1.13
HDAC3-216ENST00000523088 PI4K2AQ9BTU6 479 aa8□□□□□ -1.13
HDAC3-216ENST00000523088 CCDC106Q9BWC9 280 aa8□□□□□ -1.13
HDAC3-216ENST00000523088 BOLA2Q9H3K6 86 aa8□□□□□ -1.13
HDAC3-216ENST00000523088 EBF2Q9HAK2 575 aa8□□□□□ -1.13
HDAC3-216ENST00000523088 DCP1AQ9NPI6 582 aaPredicted RBP8□□□□□ -1.13
HDAC3-216ENST00000523088 PAK6Q9NQU5 681 aaPredicted RBP8□□□□□ -1.13
HDAC3-216ENST00000523088 C8orf4Q9NR00 106 aa8□□□□□ -1.13
HDAC3-216ENST00000523088 ST7Q9NRC1 585 aa8□□□□□ -1.13
HDAC3-216ENST00000523088 FARSBQ9NSD9 589 aaKnown RBP8□□□□□ -1.13
HDAC3-216ENST00000523088 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8□□□□□ -1.13
HDAC3-216ENST00000523088 NKIRAS2Q9NYR9 191 aa8□□□□□ -1.13
HDAC3-216ENST00000523088 TRPM5Q9NZQ8 1165 aa8□□□□□ -1.13
HDAC3-216ENST00000523088 PCDH10Q9P2E7 1040 aa8□□□□□ -1.13
HDAC3-216ENST00000523088 MYO1AQ9UBC5 1043 aa8□□□□□ -1.13
HDAC3-216ENST00000523088 MTRRQ9UBK8 725 aa8□□□□□ -1.13
HDAC3-216ENST00000523088 HMGXB4Q9UGU5 601 aa8□□□□□ -1.13
HDAC3-216ENST00000523088 AMACRQ9UHK6 382 aa8□□□□□ -1.13
HDAC3-216ENST00000523088 SH3BGRL2Q9UJC5 107 aa8□□□□□ -1.13
HDAC3-216ENST00000523088 ANAPC5Q9UJX4 755 aa8□□□□□ -1.13
HDAC3-216ENST00000523088 VANGL2Q9ULK5 521 aa8□□□□□ -1.13
HDAC3-216ENST00000523088 CHTOPQ9Y3Y2 248 aaKnown RBP8□□□□□ -1.13
HDAC3-216ENST00000523088 ZSCAN21Q9Y5A6 473 aaPredicted RBP8□□□□□ -1.13
HDAC3-216ENST00000523088 NR2E3Q9Y5X4 410 aa8□□□□□ -1.13
HDAC3-216ENST00000523088 PARP14Q460N5 1801 aa8□□□□□ -1.13
HDAC3-216ENST00000523088 MYH4Q9Y623 1939 aa7.99□□□□□ -1.13
HDAC3-216ENST00000523088 A0A0G2JPF8 293 aa7.99□□□□□ -1.13
HDAC3-216ENST00000523088 HNRNPCL3B7ZW38 293 aa7.99□□□□□ -1.13
HDAC3-216ENST00000523088 GOLGA8SH3BPF8 625 aa7.99□□□□□ -1.13
HDAC3-216ENST00000523088 SGK1O00141 431 aa7.99□□□□□ -1.13
HDAC3-216ENST00000523088 STK25O00506 426 aa7.99□□□□□ -1.13
HDAC3-216ENST00000523088 CDK2AP1O14519 115 aa7.99□□□□□ -1.13
HDAC3-216ENST00000523088 HDAC3O15379 428 aa7.99□□□□□ -1.13
HDAC3-216ENST00000523088 KATNA1O75449 491 aa7.99□□□□□ -1.13
HDAC3-216ENST00000523088 FARP2O94887 1054 aaPredicted RBP7.99□□□□□ -1.13
HDAC3-216ENST00000523088 LCA5LO95447 670 aa7.99□□□□□ -1.13
HDAC3-216ENST00000523088 SGPL1O95470 568 aa7.99□□□□□ -1.13
HDAC3-216ENST00000523088 P4HBP07237 508 aaKnown RBP7.99□□□□□ -1.13
HDAC3-216ENST00000523088 HNRNPCL4P0DMR1 293 aa7.99□□□□□ -1.13
HDAC3-216ENST00000523088 TOP1P11387 765 aaKnown RBP7.99□□□□□ -1.13
HDAC3-216ENST00000523088 ARF4P18085 180 aaPredicted RBP7.99□□□□□ -1.13
HDAC3-216ENST00000523088 LSP1P33241 339 aa7.99□□□□□ -1.13
HDAC3-216ENST00000523088 SHMT1P34896 483 aa7.99□□□□□ -1.13
HDAC3-216ENST00000523088 ATP5OP48047 213 aa7.99□□□□□ -1.13
HDAC3-216ENST00000523088 ARHGDIBP52566 201 aa7.99□□□□□ -1.13
HDAC3-216ENST00000523088 AP3M2P53677 418 aa7.99□□□□□ -1.13
HDAC3-216ENST00000523088 VBP1P61758 197 aa7.99□□□□□ -1.13
HDAC3-216ENST00000523088 RRP1BQ14684 758 aaKnown RBP7.99□□□□□ -1.13
HDAC3-216ENST00000523088 LRRC41Q15345 812 aa7.99□□□□□ -1.13
HDAC3-216ENST00000523088 ADRM1Q16186 407 aa7.99□□□□□ -1.13
HDAC3-216ENST00000523088 CNGA2Q16280 664 aa7.99□□□□□ -1.13
HDAC3-216ENST00000523088 LETM2Q2VYF4 491 aa7.99□□□□□ -1.13
HDAC3-216ENST00000523088 MCTP1Q6DN14 999 aa7.99□□□□□ -1.13
HDAC3-216ENST00000523088 TTBK2Q6IQ55 1244 aa7.99□□□□□ -1.13
HDAC3-216ENST00000523088 C11orf88Q6PI97 169 aa7.99□□□□□ -1.13
HDAC3-216ENST00000523088 POMZP3Q6PJE2 187 aa7.99□□□□□ -1.13
HDAC3-216ENST00000523088 BEND4Q6ZU67 534 aa7.99□□□□□ -1.13
HDAC3-216ENST00000523088 SLC9B2Q86UD5 537 aa7.99□□□□□ -1.13
HDAC3-216ENST00000523088 STK32CQ86UX6 486 aa7.99□□□□□ -1.13
HDAC3-216ENST00000523088 RNF135Q8IUD6 432 aa7.99□□□□□ -1.13
HDAC3-216ENST00000523088 LCORLQ8N3X6 602 aa7.99□□□□□ -1.13
HDAC3-216ENST00000523088 KBTBD3Q8NAB2 608 aa7.99□□□□□ -1.13
HDAC3-216ENST00000523088 U2AF1L4Q8WU68 220 aaKnown RBP7.99□□□□□ -1.13
HDAC3-216ENST00000523088 NCLNQ969V3 563 aa7.99□□□□□ -1.13
HDAC3-216ENST00000523088 NLRP4Q96MN2 994 aa7.99□□□□□ -1.13
HDAC3-216ENST00000523088 CIB1Q99828 191 aa7.99□□□□□ -1.13
HDAC3-216ENST00000523088 UBE2OQ9C0C9 1292 aaKnown RBP7.99□□□□□ -1.13
HDAC3-216ENST00000523088 KLHL4Q9C0H6 718 aa7.99□□□□□ -1.13
HDAC3-216ENST00000523088 GBA3Q9H227 469 aa7.99□□□□□ -1.13
HDAC3-216ENST00000523088 ADNPQ9H2P0 1102 aa7.99□□□□□ -1.13
HDAC3-216ENST00000523088 TPK1Q9H3S4 243 aa7.99□□□□□ -1.13
HDAC3-216ENST00000523088 MMRN2Q9H8L6 949 aa7.99□□□□□ -1.13
HDAC3-216ENST00000523088 HMX1Q9NP08 348 aaPredicted RBP7.99□□□□□ -1.13
HDAC3-216ENST00000523088 CCDC177Q9NQR7 707 aaPredicted RBP7.99□□□□□ -1.13
HDAC3-216ENST00000523088 EMILIN3Q9NT22 766 aa7.99□□□□□ -1.13
HDAC3-216ENST00000523088 DDX18Q9NVP1 670 aaKnown RBP7.99□□□□□ -1.13
HDAC3-216ENST00000523088 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.99□□□□□ -1.13
HDAC3-216ENST00000523088 MALT1Q9UDY8 824 aa7.99□□□□□ -1.13
HDAC3-216ENST00000523088 GABRQQ9UN88 632 aa7.99□□□□□ -1.13
HDAC3-216ENST00000523088 MED16Q9Y2X0 877 aa7.99□□□□□ -1.13
HDAC3-216ENST00000523088 PCDHB6Q9Y5E3 794 aa7.99□□□□□ -1.13
HDAC3-216ENST00000523088 NDUFB9Q9Y6M9 179 aa7.99□□□□□ -1.13
HDAC3-216ENST00000523088 GREB1LQ9C091 1923 aaPredicted RBP7.99□□□□□ -1.13
HDAC3-216ENST00000523088 ZNF536O15090 1300 aa7.99□□□□□ -1.13
HDAC3-216ENST00000523088 ITIH6Q6UXX5 1313 aa7.99□□□□□ -1.13
HDAC3-216ENST00000523088 RPTORQ8N122 1335 aa7.99□□□□□ -1.13
HDAC3-216ENST00000523088 FRMPD3Q5JV73 1810 aa7.99□□□□□ -1.13
HDAC3-216ENST00000523088 MACROD2A1Z1Q3 448 aa7.98□□□□□ -1.13
HDAC3-216ENST00000523088 WDR91A4D1P6 747 aa7.98□□□□□ -1.13
HDAC3-216ENST00000523088 FADS2P1A8MWK0 482 aa7.98□□□□□ -1.13
HDAC3-216ENST00000523088 F8W810 466 aa7.98□□□□□ -1.13
HDAC3-216ENST00000523088 GOLGA8RI6L899 631 aa7.98□□□□□ -1.13
HDAC3-216ENST00000523088 J3KRW8 73 aa7.98□□□□□ -1.13
HDAC3-216ENST00000523088 VWA5AO00534 786 aa7.98□□□□□ -1.13
HDAC3-216ENST00000523088 E2F3O00716 465 aa7.98□□□□□ -1.13
HDAC3-216ENST00000523088 ST8SIA5O15466 376 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms