RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 TMEM88BA6NKF7 163 aa17.98■□□□□ 0.47
SREK1-212ENST00000522912 PGRMC1O00264 195 aaKnown RBP17.98■□□□□ 0.47
SREK1-212ENST00000522912 ATP8B1O43520 1251 aa17.98■□□□□ 0.47
SREK1-212ENST00000522912 GRM5P41594 1212 aa17.98■□□□□ 0.47
SREK1-212ENST00000522912 NSFP46459 744 aaKnown RBP17.98■□□□□ 0.47
SREK1-212ENST00000522912 GUCY2FP51841 1108 aa17.98■□□□□ 0.47
SREK1-212ENST00000522912 FCGRTP55899 365 aa17.98■□□□□ 0.47
SREK1-212ENST00000522912 TMEM132DQ14C87 1099 aa17.98■□□□□ 0.47
SREK1-212ENST00000522912 RALGAPA2Q2PPJ7 1873 aa17.98■□□□□ 0.47
SREK1-212ENST00000522912 ZNF394Q53GI3 561 aa17.98■□□□□ 0.47
SREK1-212ENST00000522912 LLGL2Q6P1M3 1020 aa17.98■□□□□ 0.47
SREK1-212ENST00000522912 PHLDB2Q86SQ0 1253 aa17.98■□□□□ 0.47
SREK1-212ENST00000522912 HHIPL1Q96JK4 782 aa17.98■□□□□ 0.47
SREK1-212ENST00000522912 RPS6KC1Q96S38 1066 aa17.98■□□□□ 0.47
SREK1-212ENST00000522912 AVENQ9NQS1 362 aaPredicted RBP17.98■□□□□ 0.47
SREK1-212ENST00000522912 L1RE1Q9UN81 338 aa17.98■□□□□ 0.47
SREK1-212ENST00000522912 DUSP11O75319 330 aaKnown RBP17.98■□□□□ 0.47
SREK1-212ENST00000522912 CYBAP13498 195 aa17.98■□□□□ 0.47
SREK1-212ENST00000522912 RRM1P23921 792 aa17.98■□□□□ 0.47
SREK1-212ENST00000522912 BRD2P25440 801 aaKnown RBP17.98■□□□□ 0.47
SREK1-212ENST00000522912 RAP1GAPP47736 663 aa17.98■□□□□ 0.47
SREK1-212ENST00000522912 DCAF4L1Q3SXM0 396 aa17.98■□□□□ 0.47
SREK1-212ENST00000522912 ZNF667Q5HYK9 610 aa17.98■□□□□ 0.47
SREK1-212ENST00000522912 C8orf74Q6P047 294 aa17.98■□□□□ 0.47
SREK1-212ENST00000522912 PAXIP1Q6ZW49 1069 aaPredicted RBP17.98■□□□□ 0.47
SREK1-212ENST00000522912 TRIB2Q92519 343 aa17.98■□□□□ 0.47
SREK1-212ENST00000522912 KRT35Q92764 455 aa17.98■□□□□ 0.47
SREK1-212ENST00000522912 CD101Q93033 1021 aa17.98■□□□□ 0.47
SREK1-212ENST00000522912 KRT12Q99456 494 aa17.98■□□□□ 0.47
SREK1-212ENST00000522912 KATNAL1Q9BW62 490 aa17.98■□□□□ 0.47
SREK1-212ENST00000522912 EIF2AQ9BY44 585 aaKnown RBP17.98■□□□□ 0.47
SREK1-212ENST00000522912 BCO2Q9BYV7 579 aa17.98■□□□□ 0.47
SREK1-212ENST00000522912 SDCBP2Q9H190 292 aa17.98■□□□□ 0.47
SREK1-212ENST00000522912 CXCL16Q9H2A7 254 aa17.98■□□□□ 0.47
SREK1-212ENST00000522912 KIF3CO14782 793 aa17.97■□□□□ 0.47
SREK1-212ENST00000522912 MYBL1P10243 752 aa17.97■□□□□ 0.47
SREK1-212ENST00000522912 MYBL2P10244 700 aa17.97■□□□□ 0.47
SREK1-212ENST00000522912 MCM3P25205 808 aa17.97■□□□□ 0.47
SREK1-212ENST00000522912 HOXC8P31273 242 aa17.97■□□□□ 0.47
SREK1-212ENST00000522912 MARCKSL1P49006 195 aa17.97■□□□□ 0.47
SREK1-212ENST00000522912 LACTBP83111 547 aaPredicted RBP17.97■□□□□ 0.47
SREK1-212ENST00000522912 WDR72Q3MJ13 1102 aa17.97■□□□□ 0.47
SREK1-212ENST00000522912 GLE1Q53GS7 698 aaKnown RBP17.97■□□□□ 0.47
SREK1-212ENST00000522912 CCNI2Q6ZMN8 369 aaPredicted RBP17.97■□□□□ 0.47
SREK1-212ENST00000522912 TMEM40Q8WWA1 233 aa17.97■□□□□ 0.47
SREK1-212ENST00000522912 AP1M1Q9BXS5 423 aa17.97■□□□□ 0.47
SREK1-212ENST00000522912 CARD9Q9H257 536 aa17.97■□□□□ 0.47
SREK1-212ENST00000522912 TTC7AQ9ULT0 858 aaPredicted RBP17.97■□□□□ 0.47
SREK1-212ENST00000522912 C2CD2Q9Y426 696 aa17.97■□□□□ 0.47
SREK1-212ENST00000522912 C17orf102A2RUQ5 167 aa17.96■□□□□ 0.47
SREK1-212ENST00000522912 MIF4GDA9UHW6 222 aaKnown RBP17.96■□□□□ 0.47
SREK1-212ENST00000522912 C6orf222P0C671 652 aaPredicted RBP17.96■□□□□ 0.47
SREK1-212ENST00000522912 EIF4BP23588 611 aaKnown RBP17.96■□□□□ 0.47
SREK1-212ENST00000522912 POLR2BP30876 1174 aaKnown RBP17.96■□□□□ 0.47
SREK1-212ENST00000522912 CDH8P55286 799 aa17.96■□□□□ 0.47
SREK1-212ENST00000522912 CAP1Q01518 475 aa17.96■□□□□ 0.47
SREK1-212ENST00000522912 PTP4A2Q12974 167 aa17.96■□□□□ 0.47
SREK1-212ENST00000522912 SLC27A1Q6PCB7 646 aa17.96■□□□□ 0.47
SREK1-212ENST00000522912 PHF13Q86YI8 300 aaPredicted RBP17.96■□□□□ 0.47
SREK1-212ENST00000522912 SMC1BQ8NDV3 1235 aa17.96■□□□□ 0.47
SREK1-212ENST00000522912 TFAP2BQ92481 460 aa17.96■□□□□ 0.47
SREK1-212ENST00000522912 TRIM11Q96F44 468 aa17.96■□□□□ 0.47
SREK1-212ENST00000522912 C11orf70Q9BRQ4 267 aa17.96■□□□□ 0.47
SREK1-212ENST00000522912 TRIM7Q9C029 511 aa17.96■□□□□ 0.47
SREK1-212ENST00000522912 GPBP1L1Q9HC44 474 aaPredicted RBP17.96■□□□□ 0.47
SREK1-212ENST00000522912 SNTG2Q9NY99 539 aa17.96■□□□□ 0.47
SREK1-212ENST00000522912 FLT3LGP49771 235 aa17.96■□□□□ 0.47
SREK1-212ENST00000522912 PEX5P50542 639 aa17.96■□□□□ 0.47
SREK1-212ENST00000522912 ZNF211Q13398 564 aaPredicted RBP17.96■□□□□ 0.47
SREK1-212ENST00000522912 SNX17Q15036 470 aa17.96■□□□□ 0.47
SREK1-212ENST00000522912 VRTNQ9H8Y1 702 aa17.96■□□□□ 0.47
SREK1-212ENST00000522912 DPP3Q9NY33 737 aa17.96■□□□□ 0.47
SREK1-212ENST00000522912 ADAM22Q9P0K1 906 aa17.96■□□□□ 0.47
SREK1-212ENST00000522912 STIM2Q9P246 746 aa17.96■□□□□ 0.47
SREK1-212ENST00000522912 AGAP1Q9UPQ3 857 aa17.96■□□□□ 0.47
SREK1-212ENST00000522912 MAP2K7O14733 419 aa17.95■□□□□ 0.46
SREK1-212ENST00000522912 ITGA4P13612 1032 aa17.95■□□□□ 0.46
SREK1-212ENST00000522912 ATICP31939 592 aa17.95■□□□□ 0.46
SREK1-212ENST00000522912 PLA2G4AP47712 749 aa17.95■□□□□ 0.46
SREK1-212ENST00000522912 GJA9P57773 515 aa17.95■□□□□ 0.46
SREK1-212ENST00000522912 YWHAEP62258 255 aaKnown RBP17.95■□□□□ 0.46
SREK1-212ENST00000522912 TNNC1P63316 161 aa17.95■□□□□ 0.46
SREK1-212ENST00000522912 TRIM32Q13049 653 aa17.95■□□□□ 0.46
SREK1-212ENST00000522912 MFSD14CQ5VZR4 134 aa17.95■□□□□ 0.46
SREK1-212ENST00000522912 NOTUMQ6P988 496 aa17.95■□□□□ 0.46
SREK1-212ENST00000522912 MMS22LQ6ZRQ5 1243 aa17.95■□□□□ 0.46
SREK1-212ENST00000522912 KLHL7Q8IXQ5 586 aa17.95■□□□□ 0.46
SREK1-212ENST00000522912 GSPT2Q8IYD1 628 aaKnown RBP17.95■□□□□ 0.46
SREK1-212ENST00000522912 RUBCNQ92622 972 aa17.95■□□□□ 0.46
SREK1-212ENST00000522912 KIF12Q96FN5 646 aa17.95■□□□□ 0.46
SREK1-212ENST00000522912 VCPIP1Q96JH7 1222 aa17.95■□□□□ 0.46
SREK1-212ENST00000522912 RNPC3Q96LT9 517 aaKnown RBP17.95■□□□□ 0.46
SREK1-212ENST00000522912 WNT8AQ9H1J5 351 aa17.95■□□□□ 0.46
SREK1-212ENST00000522912 SMYD3Q9H7B4 428 aa17.95■□□□□ 0.46
SREK1-212ENST00000522912 ANAPC7Q9UJX3 599 aa17.95■□□□□ 0.46
SREK1-212ENST00000522912 SCN10AQ9Y5Y9 1956 aa17.95■□□□□ 0.46
SREK1-212ENST00000522912 CENPFP49454 3210 aa17.94■□□□□ 0.46
SREK1-212ENST00000522912 FGGP02679 453 aa17.94■□□□□ 0.46
SREK1-212ENST00000522912 GLI1P08151 1106 aa17.94■□□□□ 0.46
SREK1-212ENST00000522912 CBX1P83916 185 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms