RNA–Protein interactions for RNA: ENST00000522117.5

SPIDR-217, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-217ENST00000522117 FHDC1Q9C0D6 1143 aaPredicted RBP12.7□□□□□ -0.38
SPIDR-217ENST00000522117 CCSER1Q9C0I3 900 aa12.7□□□□□ -0.38
SPIDR-217ENST00000522117 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.7□□□□□ -0.38
SPIDR-217ENST00000522117 SCHIP1Q9P0W5 487 aaPredicted RBP12.7□□□□□ -0.38
SPIDR-217ENST00000522117 DCTN4Q9UJW0 460 aa12.7□□□□□ -0.38
SPIDR-217ENST00000522117 PCDHGB4Q9UN71 923 aa12.7□□□□□ -0.38
SPIDR-217ENST00000522117 PLA2G4CQ9UP65 541 aa12.7□□□□□ -0.38
SPIDR-217ENST00000522117 CARD8Q9Y2G2 431 aa12.7□□□□□ -0.38
SPIDR-217ENST00000522117 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.7□□□□□ -0.38
SPIDR-217ENST00000522117 PCDHGB5Q9Y5G0 923 aa12.7□□□□□ -0.38
SPIDR-217ENST00000522117 V9GY48 417 aaPredicted RBP12.7□□□□□ -0.38
SPIDR-217ENST00000522117 ATRNO75882 1429 aa12.7□□□□□ -0.38
SPIDR-217ENST00000522117 MEGF6O75095 1541 aa12.69□□□□□ -0.38
SPIDR-217ENST00000522117 DNAJC6O75061 913 aa12.69□□□□□ -0.38
SPIDR-217ENST00000522117 CTNNA2P26232 953 aa12.69□□□□□ -0.38
SPIDR-217ENST00000522117 ADD2P35612 726 aa12.69□□□□□ -0.38
SPIDR-217ENST00000522117 PHKA2P46019 1235 aa12.69□□□□□ -0.38
SPIDR-217ENST00000522117 EIF2B2P49770 351 aaKnown RBP12.69□□□□□ -0.38
SPIDR-217ENST00000522117 IGBP1P78318 339 aa12.69□□□□□ -0.38
SPIDR-217ENST00000522117 IFIT5Q13325 482 aaKnown RBP12.69□□□□□ -0.38
SPIDR-217ENST00000522117 CTTNQ14247 550 aaKnown RBP12.69□□□□□ -0.38
SPIDR-217ENST00000522117 CYTH1Q15438 398 aa12.69□□□□□ -0.38
SPIDR-217ENST00000522117 ARL13BQ3SXY8 428 aa12.69□□□□□ -0.38
SPIDR-217ENST00000522117 MAP3K21Q5TCX8 1036 aa12.69□□□□□ -0.38
SPIDR-217ENST00000522117 CCSAPQ6IQ19 270 aaPredicted RBP12.69□□□□□ -0.38
SPIDR-217ENST00000522117 ANO5Q75V66 913 aa12.69□□□□□ -0.38
SPIDR-217ENST00000522117 CYFIP1Q7L576 1253 aa12.69□□□□□ -0.38
SPIDR-217ENST00000522117 VASH1Q7L8A9 365 aaPredicted RBP12.69□□□□□ -0.38
SPIDR-217ENST00000522117 TMC7Q7Z402 723 aa12.69□□□□□ -0.38
SPIDR-217ENST00000522117 PRUNE1Q86TP1 453 aa12.69□□□□□ -0.38
SPIDR-217ENST00000522117 KSR1Q8IVT5 923 aa12.69□□□□□ -0.38
SPIDR-217ENST00000522117 MAML1Q92585 1016 aa12.69□□□□□ -0.38
SPIDR-217ENST00000522117 BIRC8Q96P09 236 aa12.69□□□□□ -0.38
SPIDR-217ENST00000522117 OSBPL6Q9BZF3 934 aa12.69□□□□□ -0.38
SPIDR-217ENST00000522117 SLC38A7Q9NVC3 462 aa12.69□□□□□ -0.38
SPIDR-217ENST00000522117 ADAMTS6Q9UKP5 1117 aa12.69□□□□□ -0.38
SPIDR-217ENST00000522117 ATP8B3O60423 1300 aa12.69□□□□□ -0.38
SPIDR-217ENST00000522117 PCDH11YQ9BZA8 1340 aa12.69□□□□□ -0.38
SPIDR-217ENST00000522117 SOBPA7XYQ1 873 aa12.69□□□□□ -0.38
SPIDR-217ENST00000522117 KLRF2D3W0D1 207 aa12.69□□□□□ -0.38
SPIDR-217ENST00000522117 FAM47E-STBD1D6RA91 191 aa12.69□□□□□ -0.38
SPIDR-217ENST00000522117 MGEA5O60502 916 aa12.69□□□□□ -0.38
SPIDR-217ENST00000522117 PCCAP05165 728 aaPredicted RBP12.69□□□□□ -0.38
SPIDR-217ENST00000522117 CHRNB2P17787 502 aa12.69□□□□□ -0.38
SPIDR-217ENST00000522117 PLCG1P19174 1290 aa12.69□□□□□ -0.38
SPIDR-217ENST00000522117 HIRAP54198 1017 aaPredicted RBP12.69□□□□□ -0.38
SPIDR-217ENST00000522117 FOLH1Q04609 750 aa12.69□□□□□ -0.38
SPIDR-217ENST00000522117 EIF2B5Q13144 721 aaKnown RBP12.69□□□□□ -0.38
SPIDR-217ENST00000522117 APOFQ13790 326 aa12.69□□□□□ -0.38
SPIDR-217ENST00000522117 TLR1Q15399 786 aa12.69□□□□□ -0.38
SPIDR-217ENST00000522117 PARP10Q53GL7 1025 aa12.69□□□□□ -0.38
SPIDR-217ENST00000522117 CNNM4Q6P4Q7 775 aa12.69□□□□□ -0.38
SPIDR-217ENST00000522117 PAOXQ6QHF9 649 aa12.69□□□□□ -0.38
SPIDR-217ENST00000522117 MARVELD2Q8N4S9 558 aa12.69□□□□□ -0.38
SPIDR-217ENST00000522117 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.69□□□□□ -0.38
SPIDR-217ENST00000522117 ALG3Q92685 438 aa12.69□□□□□ -0.38
SPIDR-217ENST00000522117 SPZ1Q9BXG8 430 aa12.69□□□□□ -0.38
SPIDR-217ENST00000522117 MRPL1Q9BYD6 325 aaKnown RBP12.69□□□□□ -0.38
SPIDR-217ENST00000522117 MUC3BQ9H195 1237 aa12.69□□□□□ -0.38
SPIDR-217ENST00000522117 LIN28AQ9H9Z2 209 aaKnown RBP12.69□□□□□ -0.38
SPIDR-217ENST00000522117 S100A14Q9HCY8 104 aa12.69□□□□□ -0.38
SPIDR-217ENST00000522117 OSGEPQ9NPF4 335 aa12.69□□□□□ -0.38
SPIDR-217ENST00000522117 FBXO6Q9NRD1 293 aaPredicted RBP12.69□□□□□ -0.38
SPIDR-217ENST00000522117 C6orf203Q9P0P8 240 aaPredicted RBP12.69□□□□□ -0.38
SPIDR-217ENST00000522117 TMCC3Q9ULS5 477 aa12.69□□□□□ -0.38
SPIDR-217ENST00000522117 SSX2IPQ9Y2D8 614 aa12.69□□□□□ -0.38
SPIDR-217ENST00000522117 FLT1P17948 1338 aa12.69□□□□□ -0.38
SPIDR-217ENST00000522117 TXNDC9O14530 226 aa12.68□□□□□ -0.38
SPIDR-217ENST00000522117 IDH1O75874 414 aaKnown RBP12.68□□□□□ -0.38
SPIDR-217ENST00000522117 H2AFZP0C0S5 128 aa12.68□□□□□ -0.38
SPIDR-217ENST00000522117 ATP6V1B1P15313 513 aa12.68□□□□□ -0.38
SPIDR-217ENST00000522117 PEX2P28328 305 aa12.68□□□□□ -0.38
SPIDR-217ENST00000522117 UBA7P41226 1012 aa12.68□□□□□ -0.38
SPIDR-217ENST00000522117 PRKCIP41743 596 aa12.68□□□□□ -0.38
SPIDR-217ENST00000522117 EPS15P42566 896 aa12.68□□□□□ -0.38
SPIDR-217ENST00000522117 RPS3AP61247 264 aaKnown RBP12.68□□□□□ -0.38
SPIDR-217ENST00000522117 IL23RQ5VWK5 629 aa12.68□□□□□ -0.38
SPIDR-217ENST00000522117 RHBDF2Q6PJF5 856 aa12.68□□□□□ -0.38
SPIDR-217ENST00000522117 H2AFVQ71UI9 128 aa12.68□□□□□ -0.38
SPIDR-217ENST00000522117 CABP7Q86V35 215 aa12.68□□□□□ -0.38
SPIDR-217ENST00000522117 ZNF75CPQ92670 426 aaPredicted RBP12.68□□□□□ -0.38
SPIDR-217ENST00000522117 ZNF594Q96JF6 807 aaPredicted RBP12.68□□□□□ -0.38
SPIDR-217ENST00000522117 CEP295NLQ96MC4 621 aa12.68□□□□□ -0.38
SPIDR-217ENST00000522117 GPATCH1Q9BRR8 931 aaKnown RBP12.68□□□□□ -0.38
SPIDR-217ENST00000522117 MAK16Q9BXY0 300 aaKnown RBP12.68□□□□□ -0.38
SPIDR-217ENST00000522117 EPB41L4AQ9HCS5 686 aaPredicted RBP12.68□□□□□ -0.38
SPIDR-217ENST00000522117 TRNAU1APQ9NX07 287 aaKnown RBP12.68□□□□□ -0.38
SPIDR-217ENST00000522117 SLC7A8Q9UHI5 535 aa12.68□□□□□ -0.38
SPIDR-217ENST00000522117 EYA2O00167 538 aa12.68□□□□□ -0.38
SPIDR-217ENST00000522117 PRPF4O43172 522 aaKnown RBP eCLIP12.68□□□□□ -0.381e-8■■■■■ 32.2
SPIDR-217ENST00000522117 CDH16O75309 829 aa12.68□□□□□ -0.38
SPIDR-217ENST00000522117 FKBP6O75344 327 aa12.68□□□□□ -0.38
SPIDR-217ENST00000522117 TM7SF2O76062 418 aa12.68□□□□□ -0.38
SPIDR-217ENST00000522117 PLEKHA8P1O95397 391 aa12.68□□□□□ -0.38
SPIDR-217ENST00000522117 OCM2P0CE71 109 aa12.68□□□□□ -0.38
SPIDR-217ENST00000522117 OCMP0CE72 109 aaPredicted RBP12.68□□□□□ -0.38
SPIDR-217ENST00000522117 PABPC1P11940 636 aaKnown RBP12.68□□□□□ -0.38
SPIDR-217ENST00000522117 PPATQ06203 517 aa12.68□□□□□ -0.38
SPIDR-217ENST00000522117 ALX1Q15699 326 aa12.68□□□□□ -0.38
SPIDR-217ENST00000522117 SLC1A5Q15758 541 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms