RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 PPARAQ07869 468 aa5.63□□□□□ -1.51
HMGB1P23-201ENST00000518743 KIAA2012Q0VF49 1180 aa5.63□□□□□ -1.51
HMGB1P23-201ENST00000518743 STK3Q13188 491 aa5.63□□□□□ -1.51
HMGB1P23-201ENST00000518743 MYBPC3Q14896 1274 aa5.63□□□□□ -1.51
HMGB1P23-201ENST00000518743 ADRM1Q16186 407 aa5.63□□□□□ -1.51
HMGB1P23-201ENST00000518743 MAN2A1Q16706 1144 aa5.63□□□□□ -1.51
HMGB1P23-201ENST00000518743 ST3GAL2Q16842 350 aa5.63□□□□□ -1.51
HMGB1P23-201ENST00000518743 LONRF1Q17RB8 773 aa5.63□□□□□ -1.51
HMGB1P23-201ENST00000518743 RSPO4Q2I0M5 234 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P23-201ENST00000518743 CCDC157Q569K6 752 aa5.63□□□□□ -1.51
HMGB1P23-201ENST00000518743 ANO1Q5XXA6 986 aa5.63□□□□□ -1.51
HMGB1P23-201ENST00000518743 ZNF530Q6P9A1 599 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P23-201ENST00000518743 BMP8AQ7Z5Y6 402 aa5.63□□□□□ -1.51
HMGB1P23-201ENST00000518743 MIB1Q86YT6 1006 aa5.63□□□□□ -1.51
HMGB1P23-201ENST00000518743 RBM12BQ8IXT5 1001 aaKnown RBP5.63□□□□□ -1.51
HMGB1P23-201ENST00000518743 ARRDC4Q8NCT1 418 aa5.63□□□□□ -1.51
HMGB1P23-201ENST00000518743 AGBL5Q8NDL9 886 aa5.63□□□□□ -1.51
HMGB1P23-201ENST00000518743 IGDCC4Q8TDY8 1250 aa5.63□□□□□ -1.51
HMGB1P23-201ENST00000518743 TSPEARQ8WU66 669 aa5.63□□□□□ -1.51
HMGB1P23-201ENST00000518743 GAB3Q8WWW8 586 aa5.63□□□□□ -1.51
HMGB1P23-201ENST00000518743 SLC2A13Q96QE2 648 aa5.63□□□□□ -1.51
HMGB1P23-201ENST00000518743 PTPN18Q99952 460 aa5.63□□□□□ -1.51
HMGB1P23-201ENST00000518743 PLCD4Q9BRC7 762 aa5.63□□□□□ -1.51
HMGB1P23-201ENST00000518743 BTBD2Q9BX70 525 aa5.63□□□□□ -1.51
HMGB1P23-201ENST00000518743 PITHD1Q9GZP4 211 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P23-201ENST00000518743 BTBD1Q9H0C5 482 aa5.63□□□□□ -1.51
HMGB1P23-201ENST00000518743 SEMA4AQ9H3S1 761 aa5.63□□□□□ -1.51
HMGB1P23-201ENST00000518743 GALNT8Q9NY28 637 aa5.63□□□□□ -1.51
HMGB1P23-201ENST00000518743 FBLN5Q9UBX5 448 aa5.63□□□□□ -1.51
HMGB1P23-201ENST00000518743 FTSJ1Q9UET6 329 aa5.63□□□□□ -1.51
HMGB1P23-201ENST00000518743 SRRDQ9UH36 339 aa5.63□□□□□ -1.51
HMGB1P23-201ENST00000518743 TMPRSS11EQ9UL52 423 aa5.63□□□□□ -1.51
HMGB1P23-201ENST00000518743 PADI4Q9UM07 663 aa5.63□□□□□ -1.51
HMGB1P23-201ENST00000518743 SSC5DA1L4H1 1573 aa5.63□□□□□ -1.51
HMGB1P23-201ENST00000518743 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P23-201ENST00000518743 ABHD14A-ACY1A0A1B0GW23 586 aa5.62□□□□□ -1.51
HMGB1P23-201ENST00000518743 MED19A0JLT2 244 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P23-201ENST00000518743 KLRG2A4D1S0 409 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P23-201ENST00000518743 CCDC154A6NI56 674 aa5.62□□□□□ -1.51
HMGB1P23-201ENST00000518743 PI4K2BG5E9Z4 385 aa5.62□□□□□ -1.51
HMGB1P23-201ENST00000518743 HTRA2O43464 458 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P23-201ENST00000518743 FRS3O43559 492 aa5.62□□□□□ -1.51
HMGB1P23-201ENST00000518743 SGTAO43765 313 aa5.62□□□□□ -1.51
HMGB1P23-201ENST00000518743 OPHN1O60890 802 aa5.62□□□□□ -1.51
HMGB1P23-201ENST00000518743 STARD3NLO95772 234 aa5.62□□□□□ -1.51
HMGB1P23-201ENST00000518743 CD8BP10966 210 aa5.62□□□□□ -1.51
HMGB1P23-201ENST00000518743 CAPN2P17655 700 aa5.62□□□□□ -1.51
HMGB1P23-201ENST00000518743 PAX3P23760 479 aa5.62□□□□□ -1.51
HMGB1P23-201ENST00000518743 PEX2P28328 305 aa5.62□□□□□ -1.51
HMGB1P23-201ENST00000518743 PSMC4P43686 418 aa5.62□□□□□ -1.51
HMGB1P23-201ENST00000518743 PPM1FP49593 454 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P23-201ENST00000518743 ALDH5A1P51649 535 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P23-201ENST00000518743 ERVFRD-1P60508 538 aa5.62□□□□□ -1.51
HMGB1P23-201ENST00000518743 SHHQ15465 462 aa5.62□□□□□ -1.51
HMGB1P23-201ENST00000518743 C1orf141Q5JVX7 400 aa5.62□□□□□ -1.51
HMGB1P23-201ENST00000518743 NKAPLQ5M9Q1 402 aa5.62□□□□□ -1.51
HMGB1P23-201ENST00000518743 AKNAD1Q5T1N1 836 aa5.62□□□□□ -1.51
HMGB1P23-201ENST00000518743 CD276Q5ZPR3 534 aa5.62□□□□□ -1.51
HMGB1P23-201ENST00000518743 VASNQ6EMK4 673 aa5.62□□□□□ -1.51
HMGB1P23-201ENST00000518743 LMBR1LQ6UX01 489 aa5.62□□□□□ -1.51
HMGB1P23-201ENST00000518743 ETV3LQ6ZN32 361 aa5.62□□□□□ -1.51
HMGB1P23-201ENST00000518743 CXXC5Q7LFL8 322 aaKnown RBP5.62□□□□□ -1.51
HMGB1P23-201ENST00000518743 CPXCR1Q8N123 301 aa5.62□□□□□ -1.51
HMGB1P23-201ENST00000518743 DEPTORQ8TB45 409 aa5.62□□□□□ -1.51
HMGB1P23-201ENST00000518743 LRTOMTQ8WZ04 291 aa5.62□□□□□ -1.51
HMGB1P23-201ENST00000518743 RBM17Q96I25 401 aaKnown RBP5.62□□□□□ -1.51
HMGB1P23-201ENST00000518743 CLMNQ96JQ2 1002 aa5.62□□□□□ -1.51
HMGB1P23-201ENST00000518743 SCLT1Q96NL6 688 aa5.62□□□□□ -1.51
HMGB1P23-201ENST00000518743 WRNIP1Q96S55 665 aa5.62□□□□□ -1.51
HMGB1P23-201ENST00000518743 NAA15Q9BXJ9 866 aaKnown RBP5.62□□□□□ -1.51
HMGB1P23-201ENST00000518743 B3GNT5Q9BYG0 378 aa5.62□□□□□ -1.51
HMGB1P23-201ENST00000518743 LRRC27Q9C0I9 530 aa5.62□□□□□ -1.51
HMGB1P23-201ENST00000518743 MTG2Q9H4K7 406 aa5.62□□□□□ -1.51
HMGB1P23-201ENST00000518743 DBNDD1Q9H9R9 158 aa5.62□□□□□ -1.51
HMGB1P23-201ENST00000518743 PPCSQ9HAB8 311 aa5.62□□□□□ -1.51
HMGB1P23-201ENST00000518743 EPB41L4AQ9HCS5 686 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P23-201ENST00000518743 RBM12Q9NTZ6 932 aaKnown RBP5.62□□□□□ -1.51
HMGB1P23-201ENST00000518743 TERF2IPQ9NYB0 399 aa5.62□□□□□ -1.51
HMGB1P23-201ENST00000518743 FZD1Q9UP38 647 aa5.62□□□□□ -1.51
HMGB1P23-201ENST00000518743 LRCH1Q9Y2L9 728 aa5.62□□□□□ -1.51
HMGB1P23-201ENST00000518743 FLT4P35916 1363 aa5.62□□□□□ -1.51
HMGB1P23-201ENST00000518743 NCAPD2Q15021 1401 aa5.62□□□□□ -1.51
HMGB1P23-201ENST00000518743 LRRC37A2A6NM11 1700 aa5.62□□□□□ -1.51
HMGB1P23-201ENST00000518743 SPTBN2O15020 2390 aa5.62□□□□□ -1.51
HMGB1P23-201ENST00000518743 DCHS1Q96JQ0 3298 aa5.61□□□□□ -1.51
HMGB1P23-201ENST00000518743 A0A0A6YYJ9 748 aa5.61□□□□□ -1.51
HMGB1P23-201ENST00000518743 RASA4BC9J798 803 aa5.61□□□□□ -1.51
HMGB1P23-201ENST00000518743 TBX3O15119 743 aa5.61□□□□□ -1.51
HMGB1P23-201ENST00000518743 RASA4O43374 803 aa5.61□□□□□ -1.51
HMGB1P23-201ENST00000518743 PHF2O75151 1096 aa5.61□□□□□ -1.51
HMGB1P23-201ENST00000518743 ENDOD1O94919 500 aa5.61□□□□□ -1.51
HMGB1P23-201ENST00000518743 PCDH8O95206 1070 aa5.61□□□□□ -1.51
HMGB1P23-201ENST00000518743 FGAP02671 866 aa5.61□□□□□ -1.51
HMGB1P23-201ENST00000518743 FUT4P22083 530 aa5.61□□□□□ -1.51
HMGB1P23-201ENST00000518743 MCAMP43121 646 aa5.61□□□□□ -1.51
HMGB1P23-201ENST00000518743 CCT5P48643 541 aa5.61□□□□□ -1.51
HMGB1P23-201ENST00000518743 MAPKAPK2P49137 400 aa5.61□□□□□ -1.51
HMGB1P23-201ENST00000518743 BNIP3Q12983 259 aa5.61□□□□□ -1.51
HMGB1P23-201ENST00000518743 LLGL1Q15334 1064 aa5.61□□□□□ -1.51
HMGB1P23-201ENST00000518743 ERAP2Q6P179 960 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms