RNA–Protein interactions for RNA: ENST00000511346.1

AC012055.1-201, humanhuman

TSL 3 BASIC

Gene AC012055.1, Length 1,144 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012055.1-201ENST00000511346 CKMT1AP12532 417 aa6.3□□□□□ -1.4
AC012055.1-201ENST00000511346 HSPA4P34932 840 aa6.3□□□□□ -1.4
AC012055.1-201ENST00000511346 MSH2P43246 934 aa6.3□□□□□ -1.4
AC012055.1-201ENST00000511346 ARF3P61204 181 aaPredicted RBP6.3□□□□□ -1.4
AC012055.1-201ENST00000511346 ARF1P84077 181 aaKnown RBP6.3□□□□□ -1.4
AC012055.1-201ENST00000511346 ZXDAP98168 799 aa6.3□□□□□ -1.4
AC012055.1-201ENST00000511346 TRPC3Q13507 836 aa6.3□□□□□ -1.4
AC012055.1-201ENST00000511346 CNN3Q15417 329 aaKnown RBP6.3□□□□□ -1.4
AC012055.1-201ENST00000511346 TESK1Q15569 626 aa6.3□□□□□ -1.4
AC012055.1-201ENST00000511346 INF2Q27J81 1249 aa6.3□□□□□ -1.4
AC012055.1-201ENST00000511346 ZACNQ401N2 412 aa6.3□□□□□ -1.4
AC012055.1-201ENST00000511346 KRTCAP3Q53RY4 240 aa6.3□□□□□ -1.4
AC012055.1-201ENST00000511346 E4F1Q66K89 784 aaPredicted RBP6.3□□□□□ -1.4
AC012055.1-201ENST00000511346 GPR139Q6DWJ6 353 aa6.3□□□□□ -1.4
AC012055.1-201ENST00000511346 KCNT2Q6UVM3 1135 aa6.3□□□□□ -1.4
AC012055.1-201ENST00000511346 NPNTQ6UXI9 565 aa6.3□□□□□ -1.4
AC012055.1-201ENST00000511346 TTLL7Q6ZT98 887 aa6.3□□□□□ -1.4
AC012055.1-201ENST00000511346 NAT8LQ8N9F0 302 aa6.3□□□□□ -1.4
AC012055.1-201ENST00000511346 GIMAP1Q8WWP7 306 aa6.3□□□□□ -1.4
AC012055.1-201ENST00000511346 EYA3Q99504 573 aa6.3□□□□□ -1.4
AC012055.1-201ENST00000511346 PYM1Q9BRP8 204 aaKnown RBP6.3□□□□□ -1.4
AC012055.1-201ENST00000511346 DESI2Q9BSY9 194 aa6.3□□□□□ -1.4
AC012055.1-201ENST00000511346 EDEM3Q9BZQ6 932 aa6.3□□□□□ -1.4
AC012055.1-201ENST00000511346 GHITMQ9H3K2 345 aa6.3□□□□□ -1.4
AC012055.1-201ENST00000511346 GPR27Q9NS67 375 aa6.3□□□□□ -1.4
AC012055.1-201ENST00000511346 KRT84Q9NSB2 600 aa6.3□□□□□ -1.4
AC012055.1-201ENST00000511346 HAUS2Q9NVX0 235 aa6.3□□□□□ -1.4
AC012055.1-201ENST00000511346 B4GALT6Q9UBX8 382 aa6.3□□□□□ -1.4
AC012055.1-201ENST00000511346 DUSP12Q9UNI6 340 aa6.3□□□□□ -1.4
AC012055.1-201ENST00000511346 SIT1Q9Y3P8 196 aa6.3□□□□□ -1.4
AC012055.1-201ENST00000511346 SNX13Q9Y5W8 968 aa6.3□□□□□ -1.4
AC012055.1-201ENST00000511346 NPFFR2Q9Y5X5 522 aa6.3□□□□□ -1.4
AC012055.1-201ENST00000511346 MATN3O15232 486 aa6.29□□□□□ -1.4
AC012055.1-201ENST00000511346 MEFVO15553 781 aaPredicted RBP6.29□□□□□ -1.4
AC012055.1-201ENST00000511346 KIF1CO43896 1103 aaKnown RBP6.29□□□□□ -1.4
AC012055.1-201ENST00000511346 FSBPO95073 299 aa6.29□□□□□ -1.4
AC012055.1-201ENST00000511346 TGDSO95455 350 aa6.29□□□□□ -1.4
AC012055.1-201ENST00000511346 SGPL1O95470 568 aa6.29□□□□□ -1.4
AC012055.1-201ENST00000511346 ALOX15P16050 662 aaPredicted RBP6.29□□□□□ -1.4
AC012055.1-201ENST00000511346 ATP2A2P16615 1042 aaKnown RBP6.29□□□□□ -1.4
AC012055.1-201ENST00000511346 ATP5F1P24539 256 aaPredicted RBP6.29□□□□□ -1.4
AC012055.1-201ENST00000511346 CLCN2P51788 898 aa6.29□□□□□ -1.4
AC012055.1-201ENST00000511346 GPR85P60893 370 aa6.29□□□□□ -1.4
AC012055.1-201ENST00000511346 RASA2Q15283 850 aa6.29□□□□□ -1.4
AC012055.1-201ENST00000511346 ARL13BQ3SXY8 428 aa6.29□□□□□ -1.4
AC012055.1-201ENST00000511346 CPZQ66K79 652 aa6.29□□□□□ -1.4
AC012055.1-201ENST00000511346 LMBR1LQ6UX01 489 aa6.29□□□□□ -1.4
AC012055.1-201ENST00000511346 CCBE1Q6UXH8 406 aaPredicted RBP6.29□□□□□ -1.4
AC012055.1-201ENST00000511346 USP45Q70EL2 814 aa6.29□□□□□ -1.4
AC012055.1-201ENST00000511346 SLC9B2Q86UD5 537 aa6.29□□□□□ -1.4
AC012055.1-201ENST00000511346 MTDHQ86UE4 582 aaKnown RBP6.29□□□□□ -1.4
AC012055.1-201ENST00000511346 DCP2Q8IU60 420 aaKnown RBP6.29□□□□□ -1.4
AC012055.1-201ENST00000511346 UNC45BQ8IWX7 931 aa6.29□□□□□ -1.4
AC012055.1-201ENST00000511346 RNF168Q8IYW5 571 aaPredicted RBP6.29□□□□□ -1.4
AC012055.1-201ENST00000511346 LINC00482Q8N8I6 264 aa6.29□□□□□ -1.4
AC012055.1-201ENST00000511346 AVL9Q8NBF6 648 aa6.29□□□□□ -1.4
AC012055.1-201ENST00000511346 CHST14Q8NCH0 376 aa6.29□□□□□ -1.4
AC012055.1-201ENST00000511346 SIMC1Q8NDZ2 872 aa6.29□□□□□ -1.4
AC012055.1-201ENST00000511346 TDRD7Q8NHU6 1098 aaKnown RBP6.29□□□□□ -1.4
AC012055.1-201ENST00000511346 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.29□□□□□ -1.4
AC012055.1-201ENST00000511346 JADE3Q92613 823 aa6.29□□□□□ -1.4
AC012055.1-201ENST00000511346 ZNF845Q96IR2 970 aaPredicted RBP6.29□□□□□ -1.4
AC012055.1-201ENST00000511346 SLX1AQ9BQ83 275 aa6.29□□□□□ -1.4
AC012055.1-201ENST00000511346 PHF20Q9BVI0 1012 aa6.29□□□□□ -1.4
AC012055.1-201ENST00000511346 CCM2LQ9NUG4 571 aaPredicted RBP6.29□□□□□ -1.4
AC012055.1-201ENST00000511346 TRMT1Q9NXH9 659 aaKnown RBP6.29□□□□□ -1.4
AC012055.1-201ENST00000511346 KCTD5Q9NXV2 234 aa6.29□□□□□ -1.4
AC012055.1-201ENST00000511346 MARCH2Q9P0N8 246 aa6.29□□□□□ -1.4
AC012055.1-201ENST00000511346 LRFN1Q9P244 771 aa6.29□□□□□ -1.4
AC012055.1-201ENST00000511346 DKK3Q9UBP4 350 aa6.29□□□□□ -1.4
AC012055.1-201ENST00000511346 PCSK1NQ9UHG2 260 aa6.29□□□□□ -1.4
AC012055.1-201ENST00000511346 CEP83Q9Y592 693 aa6.29□□□□□ -1.4
AC012055.1-201ENST00000511346 PCDHA8Q9Y5H6 950 aa6.29□□□□□ -1.4
AC012055.1-201ENST00000511346 PI4KAP2A4QPH2 592 aa6.28□□□□□ -1.4
AC012055.1-201ENST00000511346 GOLGA6L3A6NEY3 463 aa6.28□□□□□ -1.4
AC012055.1-201ENST00000511346 GOLGA8AA7E2F4 631 aa6.28□□□□□ -1.4
AC012055.1-201ENST00000511346 GOLGA8BA8MQT2 603 aa6.28□□□□□ -1.4
AC012055.1-201ENST00000511346 C1QTNF3-AMACRE9PGA6 284 aa6.28□□□□□ -1.4
AC012055.1-201ENST00000511346 H0Y626 953 aa6.28□□□□□ -1.4
AC012055.1-201ENST00000511346 ARNTLO00327 626 aa6.28□□□□□ -1.4
AC012055.1-201ENST00000511346 DOK2O60496 412 aa6.28□□□□□ -1.4
AC012055.1-201ENST00000511346 PLATP00750 562 aa6.28□□□□□ -1.4
AC012055.1-201ENST00000511346 SCG2P13521 617 aa6.28□□□□□ -1.4
AC012055.1-201ENST00000511346 CHMP24386 653 aa6.28□□□□□ -1.4
AC012055.1-201ENST00000511346 HTR1BP28222 390 aa6.28□□□□□ -1.4
AC012055.1-201ENST00000511346 ACTN2P35609 894 aa6.28□□□□□ -1.4
AC012055.1-201ENST00000511346 LTBRP36941 435 aa6.28□□□□□ -1.4
AC012055.1-201ENST00000511346 GPR3P46089 330 aa6.28□□□□□ -1.4
AC012055.1-201ENST00000511346 ALDH9A1P49189 494 aa6.28□□□□□ -1.4
AC012055.1-201ENST00000511346 AGFG1P52594 562 aaKnown RBP6.28□□□□□ -1.4
AC012055.1-201ENST00000511346 NR1H2P55055 460 aa6.28□□□□□ -1.4
AC012055.1-201ENST00000511346 VAMP2P63027 116 aa6.28□□□□□ -1.4
AC012055.1-201ENST00000511346 AKAP17AQ02040 695 aaKnown RBP6.28□□□□□ -1.4
AC012055.1-201ENST00000511346 MAPK7Q13164 816 aa6.28□□□□□ -1.4
AC012055.1-201ENST00000511346 ADAM15Q13444 863 aa6.28□□□□□ -1.4
AC012055.1-201ENST00000511346 MEX3CQ5U5Q3 659 aaKnown RBP6.28□□□□□ -1.4
AC012055.1-201ENST00000511346 BROXQ5VW32 411 aa6.28□□□□□ -1.4
AC012055.1-201ENST00000511346 HAUS3Q68CZ6 603 aa6.28□□□□□ -1.4
AC012055.1-201ENST00000511346 IRGCQ6NXR0 463 aa6.28□□□□□ -1.4
AC012055.1-201ENST00000511346 FAM47EQ6ZV65 393 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms