RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 CCDC62Q6P9F0 684 aa7.66□□□□□ -1.18
LIMCH1-207ENST00000508466 ZCCHC23Q6ZST2 131 aa7.66□□□□□ -1.18
LIMCH1-207ENST00000508466 ARPINQ7Z6K5 226 aa7.66□□□□□ -1.18
LIMCH1-207ENST00000508466 PSD4Q8NDX1 1056 aa7.66□□□□□ -1.18
LIMCH1-207ENST00000508466 DEPTORQ8TB45 409 aa7.66□□□□□ -1.18
LIMCH1-207ENST00000508466 TCP10LQ8TDR4 215 aa7.66□□□□□ -1.18
LIMCH1-207ENST00000508466 SCFD1Q8WVM8 642 aa7.66□□□□□ -1.18
LIMCH1-207ENST00000508466 DGCR14Q96DF8 476 aaKnown RBP7.66□□□□□ -1.18
LIMCH1-207ENST00000508466 ACAP3Q96P50 834 aa7.66□□□□□ -1.18
LIMCH1-207ENST00000508466 PPP1R10Q96QC0 940 aaKnown RBP7.66□□□□□ -1.18
LIMCH1-207ENST00000508466 GPR108Q9NPR9 543 aa7.66□□□□□ -1.18
LIMCH1-207ENST00000508466 LARSQ9P2J5 1176 aaKnown RBP7.66□□□□□ -1.18
LIMCH1-207ENST00000508466 USTQ9Y2C2 406 aa7.66□□□□□ -1.18
LIMCH1-207ENST00000508466 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.66□□□□□ -1.18
LIMCH1-207ENST00000508466 MAD1L1Q9Y6D9 718 aa7.66□□□□□ -1.18
LIMCH1-207ENST00000508466 POTEB3A0JP26 581 aa7.66□□□□□ -1.18
LIMCH1-207ENST00000508466 POTECB2RU33 542 aa7.66□□□□□ -1.18
LIMCH1-207ENST00000508466 BHMG1C9JSJ3 638 aaPredicted RBP7.66□□□□□ -1.18
LIMCH1-207ENST00000508466 FOXN3O00409 490 aaPredicted RBP7.66□□□□□ -1.18
LIMCH1-207ENST00000508466 PLSCR1O15162 318 aa7.66□□□□□ -1.18
LIMCH1-207ENST00000508466 ECE2O60344 883 aa7.66□□□□□ -1.18
LIMCH1-207ENST00000508466 TOP3BO95985 862 aaKnown RBP7.66□□□□□ -1.18
LIMCH1-207ENST00000508466 SSTR1P30872 391 aa7.66□□□□□ -1.18
LIMCH1-207ENST00000508466 SKIV2L2P42285 1042 aaKnown RBP7.66□□□□□ -1.18
LIMCH1-207ENST00000508466 CYP2J2P51589 502 aa7.66□□□□□ -1.18
LIMCH1-207ENST00000508466 SLC5A3P53794 718 aa7.66□□□□□ -1.18
LIMCH1-207ENST00000508466 PSMC6P62333 389 aa7.66□□□□□ -1.18
LIMCH1-207ENST00000508466 DCAF6Q58WW2 860 aa7.66□□□□□ -1.18
LIMCH1-207ENST00000508466 C16orf87Q6PH81 154 aa7.66□□□□□ -1.18
LIMCH1-207ENST00000508466 POTEBQ6S5H4 581 aa7.66□□□□□ -1.18
LIMCH1-207ENST00000508466 UNC13DQ70J99 1090 aa7.66□□□□□ -1.18
LIMCH1-207ENST00000508466 RSPH3Q86UC2 560 aa7.66□□□□□ -1.18
LIMCH1-207ENST00000508466 WDR75Q8IWA0 830 aaKnown RBP7.66□□□□□ -1.18
LIMCH1-207ENST00000508466 FAM186BQ8IYM0 893 aa7.66□□□□□ -1.18
LIMCH1-207ENST00000508466 ULK2Q8IYT8 1036 aa7.66□□□□□ -1.18
LIMCH1-207ENST00000508466 ANKRD35Q8N283 1001 aa7.66□□□□□ -1.18
LIMCH1-207ENST00000508466 SERPINB12Q96P63 405 aa7.66□□□□□ -1.18
LIMCH1-207ENST00000508466 CCSER1Q9C0I3 900 aa7.66□□□□□ -1.18
LIMCH1-207ENST00000508466 CYLDQ9NQC7 956 aa7.66□□□□□ -1.18
LIMCH1-207ENST00000508466 BMP2KQ9NSY1 1161 aaPredicted RBP7.66□□□□□ -1.18
LIMCH1-207ENST00000508466 STARD13Q9Y3M8 1113 aa7.66□□□□□ -1.18
LIMCH1-207ENST00000508466 SPO11Q9Y5K1 396 aa7.66□□□□□ -1.18
LIMCH1-207ENST00000508466 MAGEB6P1A0A0J9YX57 407 aa7.65□□□□□ -1.18
LIMCH1-207ENST00000508466 PRR5-ARHGAP8B1AHC4 643 aa7.65□□□□□ -1.18
LIMCH1-207ENST00000508466 CYB561D2O14569 222 aa7.65□□□□□ -1.18
LIMCH1-207ENST00000508466 ATP5HO75947 161 aa7.65□□□□□ -1.18
LIMCH1-207ENST00000508466 PDE8BO95263 885 aa7.65□□□□□ -1.18
LIMCH1-207ENST00000508466 LMNAP02545 664 aaKnown RBP7.65□□□□□ -1.18
LIMCH1-207ENST00000508466 PABPC4LP0CB38 370 aaKnown RBP7.65□□□□□ -1.18
LIMCH1-207ENST00000508466 STAT1P42224 750 aa7.65□□□□□ -1.18
LIMCH1-207ENST00000508466 YWHAGP61981 247 aaKnown RBP eCLIP7.65□□□□□ -1.18
LIMCH1-207ENST00000508466 ARHGAP8P85298 464 aa7.65□□□□□ -1.18
LIMCH1-207ENST00000508466 TNFAIP8L3Q5GJ75 292 aa7.65□□□□□ -1.18
LIMCH1-207ENST00000508466 SH2D4BQ5SQS7 431 aa7.65□□□□□ -1.18
LIMCH1-207ENST00000508466 RC3H1Q5TC82 1133 aaKnown RBP7.65□□□□□ -1.18
LIMCH1-207ENST00000508466 FYB2Q5VWT5 728 aa7.65□□□□□ -1.18
LIMCH1-207ENST00000508466 PCNX4Q63HM2 1172 aa7.65□□□□□ -1.18
LIMCH1-207ENST00000508466 KLC3Q6P597 504 aa7.65□□□□□ -1.18
LIMCH1-207ENST00000508466 PRPF39Q86UA1 669 aaKnown RBP7.65□□□□□ -1.18
LIMCH1-207ENST00000508466 DZIP1Q86YF9 867 aaKnown RBP7.65□□□□□ -1.18
LIMCH1-207ENST00000508466 CLEC10AQ8IUN9 316 aa7.65□□□□□ -1.18
LIMCH1-207ENST00000508466 GUF1Q8N442 669 aaKnown RBP7.65□□□□□ -1.18
LIMCH1-207ENST00000508466 NAT16Q8N8M0 369 aa7.65□□□□□ -1.18
LIMCH1-207ENST00000508466 SMYD1Q8NB12 490 aa7.65□□□□□ -1.18
LIMCH1-207ENST00000508466 AGR3Q8TD06 166 aa7.65□□□□□ -1.18
LIMCH1-207ENST00000508466 NCSTNQ92542 709 aa7.65□□□□□ -1.18
LIMCH1-207ENST00000508466 PPP2R3CQ969Q6 453 aa7.65□□□□□ -1.18
LIMCH1-207ENST00000508466 PTCD3Q96EY7 689 aaKnown RBP7.65□□□□□ -1.18
LIMCH1-207ENST00000508466 FAM111AQ96PZ2 611 aa7.65□□□□□ -1.18
LIMCH1-207ENST00000508466 RANBP17Q9H2T7 1088 aaKnown RBP7.65□□□□□ -1.18
LIMCH1-207ENST00000508466 SIAEQ9HAT2 523 aa7.65□□□□□ -1.18
LIMCH1-207ENST00000508466 SAP30BPQ9UHR5 308 aaKnown RBP7.65□□□□□ -1.18
LIMCH1-207ENST00000508466 TRMT112Q9UI30 125 aaKnown RBP7.65□□□□□ -1.18
LIMCH1-207ENST00000508466 FBXO3Q9UK99 471 aa7.65□□□□□ -1.18
LIMCH1-207ENST00000508466 DNAJC12Q9UKB3 198 aa7.65□□□□□ -1.18
LIMCH1-207ENST00000508466 INPP5FQ9Y2H2 1132 aa7.65□□□□□ -1.18
LIMCH1-207ENST00000508466 PCDH11YQ9BZA8 1340 aa7.65□□□□□ -1.18
LIMCH1-207ENST00000508466 UBAP1LF5GYI3 381 aa7.65□□□□□ -1.18
LIMCH1-207ENST00000508466 ZBTB39O15060 712 aa7.65□□□□□ -1.18
LIMCH1-207ENST00000508466 TTLL1O95922 423 aa7.65□□□□□ -1.18
LIMCH1-207ENST00000508466 GCP02774 474 aa7.65□□□□□ -1.18
LIMCH1-207ENST00000508466 TAL1P17542 331 aaPredicted RBP7.65□□□□□ -1.18
LIMCH1-207ENST00000508466 TCN1P20061 433 aaPredicted RBP7.65□□□□□ -1.18
LIMCH1-207ENST00000508466 SERPINB8P50452 374 aa7.65□□□□□ -1.18
LIMCH1-207ENST00000508466 PDIA2Q13087 525 aaKnown RBP7.65□□□□□ -1.18
LIMCH1-207ENST00000508466 CALCRLQ16602 461 aa7.65□□□□□ -1.18
LIMCH1-207ENST00000508466 NRF1Q16656 503 aa7.65□□□□□ -1.18
LIMCH1-207ENST00000508466 LDLRAP1Q5SW96 308 aa7.65□□□□□ -1.18
LIMCH1-207ENST00000508466 SEL1L2Q5TEA6 688 aa7.65□□□□□ -1.18
LIMCH1-207ENST00000508466 KIF6Q6ZMV9 814 aa7.65□□□□□ -1.18
LIMCH1-207ENST00000508466 DENND5BQ6ZUT9 1274 aa7.65□□□□□ -1.18
LIMCH1-207ENST00000508466 SLFN11Q7Z7L1 901 aa7.65□□□□□ -1.18
LIMCH1-207ENST00000508466 VPS36Q86VN1 386 aa7.65□□□□□ -1.18
LIMCH1-207ENST00000508466 GPBP1Q86WP2 473 aa7.65□□□□□ -1.18
LIMCH1-207ENST00000508466 HPS6Q86YV9 775 aa7.65□□□□□ -1.18
LIMCH1-207ENST00000508466 ZBED8Q8IZ13 594 aa7.65□□□□□ -1.18
LIMCH1-207ENST00000508466 SYCE1Q8N0S2 351 aa7.65□□□□□ -1.18
LIMCH1-207ENST00000508466 CCDC24Q8N4L8 307 aa7.65□□□□□ -1.18
LIMCH1-207ENST00000508466 GRK7Q8WTQ7 553 aa7.65□□□□□ -1.18
LIMCH1-207ENST00000508466 SLC13A1Q9BZW2 595 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms