RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 MYCLP12524 364 aaPredicted RBP4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 ZKSCAN1P17029 563 aaPredicted RBP4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 DESP17661 470 aa4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 FBLP22087 321 aaKnown RBP4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 ZFP36P26651 326 aaKnown RBP4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 RXRGP48443 463 aa4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 TMPRSS15P98073 1019 aa4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 CALD1Q05682 793 aaKnown RBP4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 ADCY2Q08462 1091 aa4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 PPFIA1Q13136 1202 aa4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 HNRNPA0Q13151 305 aaKnown RBP4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 STAT4Q14765 748 aa4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 EPHA7Q15375 998 aa4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 PTPN14Q15678 1187 aa4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 CCDC142Q17RM4 750 aa4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 TIGD2Q4W5G0 525 aa4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 DCAF17Q5H9S7 520 aaPredicted RBP4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 HECTD2Q5U5R9 776 aa4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 VPS53Q5VIR6 699 aa4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 ARMC3Q5W041 872 aa4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 NAIF1Q69YI7 327 aaPredicted RBP4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 IQSEC1Q6DN90 963 aa4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 HIBCHQ6NVY1 386 aaPredicted RBP4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 RFX8Q6ZV50 586 aa4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 UBE2R2Q712K3 238 aaPredicted RBP4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 FASTKD5Q7L8L6 764 aaKnown RBP4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 SRGAP1Q7Z6B7 1085 aa4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 SDCCAG8Q86SQ7 713 aaPredicted RBP4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 NME9Q86XW9 330 aa4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 NKAPQ8N5F7 415 aaKnown RBP4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 CNTD1Q8N815 330 aa4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 POF1BQ8WVV4 589 aa4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 TIFAQ96CG3 184 aa4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 AIFM3Q96NN9 605 aa4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 FAM193BQ96PV7 902 aaPredicted RBP4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 MAP3K14Q99558 947 aa4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 NUP88Q99567 741 aaPredicted RBP4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 TARS2Q9BW92 718 aaKnown RBP4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 FAM126AQ9BYI3 521 aaPredicted RBP4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 XPO4Q9C0E2 1151 aaKnown RBP4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 EPC1Q9H2F5 836 aa4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 ZNF768Q9H5H4 540 aaKnown RBP4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 RIOX1Q9H6W3 641 aa4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 ATP6V0A4Q9HBG4 840 aa4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 TCF7L1Q9HCS4 588 aa4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 CABP5Q9NP86 173 aa4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 NMRK2Q9NPI5 230 aa4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 ING3Q9NXR8 418 aa4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 CFDP1Q9UEE9 299 aaPredicted RBP4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 XPO7Q9UIA9 1087 aaKnown RBP4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 TNPO3Q9Y5L0 923 aaKnown RBP4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 HS3ST4Q9Y661 456 aa4.09□□□□□ -1.75
HMGB3P15-201ENST00000507326 A0A0A6YYJ9 748 aa4.08□□□□□ -1.76
HMGB3P15-201ENST00000507326 B4DLN1 442 aa4.08□□□□□ -1.76
HMGB3P15-201ENST00000507326 APAF1O14727 1248 aa4.08□□□□□ -1.76
HMGB3P15-201ENST00000507326 MTSS1O43312 755 aa4.08□□□□□ -1.76
HMGB3P15-201ENST00000507326 KIF5CO60282 957 aa4.08□□□□□ -1.76
HMGB3P15-201ENST00000507326 OPA1O60313 960 aa4.08□□□□□ -1.76
HMGB3P15-201ENST00000507326 TBCAO75347 108 aaKnown RBP4.08□□□□□ -1.76
HMGB3P15-201ENST00000507326 EYA4O95677 639 aa4.08□□□□□ -1.76
HMGB3P15-201ENST00000507326 PF4V1P10720 104 aa4.08□□□□□ -1.76
HMGB3P15-201ENST00000507326 STMN1P16949 149 aa4.08□□□□□ -1.76
HMGB3P15-201ENST00000507326 ATF7P17544 494 aaPredicted RBP4.08□□□□□ -1.76
HMGB3P15-201ENST00000507326 XBP1P17861 261 aa4.08□□□□□ -1.76
HMGB3P15-201ENST00000507326 SLC9A1P19634 815 aa4.08□□□□□ -1.76
HMGB3P15-201ENST00000507326 ELF1P32519 619 aa4.08□□□□□ -1.76
HMGB3P15-201ENST00000507326 IGFALSP35858 605 aa4.08□□□□□ -1.76
HMGB3P15-201ENST00000507326 UBA7P41226 1012 aa4.08□□□□□ -1.76
HMGB3P15-201ENST00000507326 RAD52P43351 418 aa4.08□□□□□ -1.76
HMGB3P15-201ENST00000507326 SCNN1BP51168 640 aa4.08□□□□□ -1.76
HMGB3P15-201ENST00000507326 PTTG1IPP53801 180 aa4.08□□□□□ -1.76
HMGB3P15-201ENST00000507326 IRX3P78415 501 aaPredicted RBP4.08□□□□□ -1.76
HMGB3P15-201ENST00000507326 MRPS21P82921 87 aaKnown RBP4.08□□□□□ -1.76
HMGB3P15-201ENST00000507326 APBA1Q02410 837 aa4.08□□□□□ -1.76
HMGB3P15-201ENST00000507326 G3BP1Q13283 466 aaKnown RBP eCLIP4.08□□□□□ -1.76
HMGB3P15-201ENST00000507326 TRIM14Q14142 442 aa4.08□□□□□ -1.76
HMGB3P15-201ENST00000507326 ZNF460Q14592 562 aa4.08□□□□□ -1.76
HMGB3P15-201ENST00000507326 SF3B3Q15393 1217 aaKnown RBP4.08□□□□□ -1.76
HMGB3P15-201ENST00000507326 ZKSCAN8Q15776 578 aaPredicted RBP4.08□□□□□ -1.76
HMGB3P15-201ENST00000507326 SEPT7Q16181 437 aaKnown RBP4.08□□□□□ -1.76
HMGB3P15-201ENST00000507326 METTL24Q5JXM2 366 aa4.08□□□□□ -1.76
HMGB3P15-201ENST00000507326 ESRP1Q6NXG1 681 aaKnown RBP4.08□□□□□ -1.76
HMGB3P15-201ENST00000507326 LVRNQ6Q4G3 990 aa4.08□□□□□ -1.76
HMGB3P15-201ENST00000507326 DSTYKQ6XUX3 929 aa4.08□□□□□ -1.76
HMGB3P15-201ENST00000507326 OTUD6AQ7L8S5 288 aa4.08□□□□□ -1.76
HMGB3P15-201ENST00000507326 SKAP1Q86WV1 359 aa4.08□□□□□ -1.76
HMGB3P15-201ENST00000507326 EGFL6Q8IUX8 553 aa4.08□□□□□ -1.76
HMGB3P15-201ENST00000507326 USP13Q92995 863 aaPredicted RBP4.08□□□□□ -1.76
HMGB3P15-201ENST00000507326 SYAP1Q96A49 352 aaPredicted RBP4.08□□□□□ -1.76
HMGB3P15-201ENST00000507326 CCDC138Q96M89 665 aa4.08□□□□□ -1.76
HMGB3P15-201ENST00000507326 CLUHP3Q96NS8 147 aa4.08□□□□□ -1.76
HMGB3P15-201ENST00000507326 CPPED1Q9BRF8 314 aaPredicted RBP4.08□□□□□ -1.76
HMGB3P15-201ENST00000507326 NOL10Q9BSC4 688 aaKnown RBP4.08□□□□□ -1.76
HMGB3P15-201ENST00000507326 MYL10Q9BUA6 226 aa4.08□□□□□ -1.76
HMGB3P15-201ENST00000507326 SLC13A1Q9BZW2 595 aa4.08□□□□□ -1.76
HMGB3P15-201ENST00000507326 PITHD1Q9GZP4 211 aaPredicted RBP4.08□□□□□ -1.76
HMGB3P15-201ENST00000507326 MTG2Q9H4K7 406 aa4.08□□□□□ -1.76
HMGB3P15-201ENST00000507326 CYP4F11Q9HBI6 524 aa4.08□□□□□ -1.76
HMGB3P15-201ENST00000507326 AGO4Q9HCK5 861 aaKnown RBP4.08□□□□□ -1.76
HMGB3P15-201ENST00000507326 PDRG1Q9NUG6 133 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms